RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 HIST1H2BDP58876 126 aa17.59■□□□□ 0.41
SNX3-201ENST00000230085 HIST1H2BCP62807 126 aa17.59■□□□□ 0.41
SNX3-201ENST00000230085 DLK1P80370 383 aa17.59■□□□□ 0.41
SNX3-201ENST00000230085 IL24Q13007 206 aa17.59■□□□□ 0.41
SNX3-201ENST00000230085 HIST2H2BEQ16778 126 aa17.59■□□□□ 0.41
SNX3-201ENST00000230085 SNAI3Q3KNW1 292 aa17.59■□□□□ 0.41
SNX3-201ENST00000230085 PHLDA2Q53GA4 152 aa17.59■□□□□ 0.41
SNX3-201ENST00000230085 NMSQ5H8A3 153 aa17.59■□□□□ 0.41
SNX3-201ENST00000230085 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.59■□□□□ 0.41
SNX3-201ENST00000230085 C20orf196Q8IYI0 205 aa17.59■□□□□ 0.41
SNX3-201ENST00000230085 GPR137CQ8N3F9 429 aa17.59■□□□□ 0.41
SNX3-201ENST00000230085 TMEM171Q8WVE6 324 aa17.59■□□□□ 0.41
SNX3-201ENST00000230085 HIST1H2BHQ93079 126 aa17.59■□□□□ 0.41
SNX3-201ENST00000230085 HIST1H2BNQ99877 126 aa17.59■□□□□ 0.41
SNX3-201ENST00000230085 HIST1H2BMQ99879 126 aa17.59■□□□□ 0.41
SNX3-201ENST00000230085 WSB1Q9Y6I7 421 aa17.59■□□□□ 0.41
SNX3-201ENST00000230085 PRB1P04280 392 aa17.58■□□□□ 0.41
SNX3-201ENST00000230085 AADACP22760 399 aa17.58■□□□□ 0.41
SNX3-201ENST00000230085 FUT6P51993 359 aa17.58■□□□□ 0.41
SNX3-201ENST00000230085 TSPO2Q5TGU0 170 aa17.58■□□□□ 0.41
SNX3-201ENST00000230085 HIST3H2BBQ8N257 126 aa17.58■□□□□ 0.41
SNX3-201ENST00000230085 SF3B5Q9BWJ5 86 aaKnown RBP17.58■□□□□ 0.41
SNX3-201ENST00000230085 NKX2-6A6NCS4 301 aa17.58■□□□□ 0.4
SNX3-201ENST00000230085 OR6C6A6NF89 314 aa17.58■□□□□ 0.4
SNX3-201ENST00000230085 FAM24AA6NFZ4 105 aa17.58■□□□□ 0.4
SNX3-201ENST00000230085 PTBP3O95758 552 aaKnown RBP17.58■□□□□ 0.4
SNX3-201ENST00000230085 MALLQ13021 153 aa17.58■□□□□ 0.4
SNX3-201ENST00000230085 ODF3L1Q8IXM7 274 aa17.58■□□□□ 0.4
SNX3-201ENST00000230085 CISD2Q8N5K1 135 aaKnown RBP17.58■□□□□ 0.4
SNX3-201ENST00000230085 ZFP62Q8NB50 900 aaPredicted RBP17.58■□□□□ 0.4
SNX3-201ENST00000230085 BORCS8Q96FH0 119 aa17.58■□□□□ 0.4
SNX3-201ENST00000230085 REEP6Q96HR9 211 aa17.58■□□□□ 0.4
SNX3-201ENST00000230085 PFDN5Q99471 154 aa17.58■□□□□ 0.4
SNX3-201ENST00000230085 PLEK2Q9NYT0 353 aa17.58■□□□□ 0.4
SNX3-201ENST00000230085 COL6A6A6NMZ7 2263 aa17.58■□□□□ 0.4
SNX3-201ENST00000230085 NCKAP5O14513 1909 aa17.57■□□□□ 0.4
SNX3-201ENST00000230085 LOC102723971A0A1B0GUV8 181 aa17.57■□□□□ 0.4
SNX3-201ENST00000230085 GPR37O15354 613 aa17.57■□□□□ 0.4
SNX3-201ENST00000230085 CXCL1P09341 107 aa17.57■□□□□ 0.4
SNX3-201ENST00000230085 RFPL3SP0C7P2 107 aa17.57■□□□□ 0.4
SNX3-201ENST00000230085 FUT3P21217 361 aa17.57■□□□□ 0.4
SNX3-201ENST00000230085 VDAC1P21796 283 aa17.57■□□□□ 0.4
SNX3-201ENST00000230085 GPX4P36969 197 aaPredicted RBP17.57■□□□□ 0.4
SNX3-201ENST00000230085 NPBWR2P48146 333 aa17.57■□□□□ 0.4
SNX3-201ENST00000230085 RBM11P57052 281 aaKnown RBP17.57■□□□□ 0.4
SNX3-201ENST00000230085 TAS2R30P59541 319 aa17.57■□□□□ 0.4
SNX3-201ENST00000230085 FXYD4P59646 89 aa17.57■□□□□ 0.4
SNX3-201ENST00000230085 ERVFRD-1P60508 538 aa17.57■□□□□ 0.4
SNX3-201ENST00000230085 DEFA6Q01524 100 aa17.57■□□□□ 0.4
SNX3-201ENST00000230085 HAGHQ16775 308 aa17.57■□□□□ 0.4
SNX3-201ENST00000230085 RNFT1Q5M7Z0 435 aa17.57■□□□□ 0.4
SNX3-201ENST00000230085 DPPA2Q7Z7J5 298 aa17.57■□□□□ 0.4
SNX3-201ENST00000230085 SELENOHQ8IZQ5 122 aaKnown RBP17.57■□□□□ 0.4
SNX3-201ENST00000230085 TTTY12Q9BZ98 90 aa17.57■□□□□ 0.4
SNX3-201ENST00000230085 TRBV24-1A0A075B6N3 115 aa17.56■□□□□ 0.4
SNX3-201ENST00000230085 IGKV1-12A0A0C4DH73 117 aa17.56■□□□□ 0.4
SNX3-201ENST00000230085 LRRC3CA6NJW4 275 aa17.56■□□□□ 0.4
SNX3-201ENST00000230085 PHOX2AO14813 284 aa17.56■□□□□ 0.4
SNX3-201ENST00000230085 GEMIN2O14893 280 aaKnown RBP17.56■□□□□ 0.4
SNX3-201ENST00000230085 PPP1R2P9O14990 202 aa17.56■□□□□ 0.4
SNX3-201ENST00000230085 DFFBO76075 338 aa17.56■□□□□ 0.4
SNX3-201ENST00000230085 IGKV1D-12P01611 117 aa17.56■□□□□ 0.4
SNX3-201ENST00000230085 GNRHRP30968 328 aa17.56■□□□□ 0.4
SNX3-201ENST00000230085 HLA-DRB3P79483 266 aa17.56■□□□□ 0.4
SNX3-201ENST00000230085 PRR30Q53SZ7 412 aaPredicted RBP17.56■□□□□ 0.4
SNX3-201ENST00000230085 Q6ZPA2 131 aa17.56■□□□□ 0.4
SNX3-201ENST00000230085 H1FOOQ8IZA3 346 aaPredicted RBP17.56■□□□□ 0.4
SNX3-201ENST00000230085 OR11L1Q8NGX0 322 aa17.56■□□□□ 0.4
SNX3-201ENST00000230085 SNRNP40Q96DI7 357 aaKnown RBP17.56■□□□□ 0.4
SNX3-201ENST00000230085 GLRX2Q9NS18 164 aa17.56■□□□□ 0.4
SNX3-201ENST00000230085 GFOD1Q9NXC2 390 aa17.56■□□□□ 0.4
SNX3-201ENST00000230085 CHD6Q8TD26 2715 aa17.56■□□□□ 0.4
SNX3-201ENST00000230085 ANGPTL7O43827 346 aa17.56■□□□□ 0.4
SNX3-201ENST00000230085 TUSC2O75896 110 aa17.56■□□□□ 0.4
SNX3-201ENST00000230085 KLK2P20151 261 aa17.56■□□□□ 0.4
SNX3-201ENST00000230085 NDUFA6P56556 154 aa17.56■□□□□ 0.4
SNX3-201ENST00000230085 PLGLB1Q02325 96 aa17.56■□□□□ 0.4
SNX3-201ENST00000230085 ZNF674Q2M3X9 581 aa17.56■□□□□ 0.4
SNX3-201ENST00000230085 LBHQ53QV2 105 aaPredicted RBP17.56■□□□□ 0.4
SNX3-201ENST00000230085 CYB561D1Q8N8Q1 229 aa17.56■□□□□ 0.4
SNX3-201ENST00000230085 ZIC4Q8N9L1 334 aa17.56■□□□□ 0.4
SNX3-201ENST00000230085 P2RX4Q99571 388 aa17.56■□□□□ 0.4
SNX3-201ENST00000230085 ATP5SQ99766 215 aa17.56■□□□□ 0.4
SNX3-201ENST00000230085 RNF150Q9ULK6 438 aa17.56■□□□□ 0.4
SNX3-201ENST00000230085 BOKQ9UMX3 212 aaPredicted RBP17.56■□□□□ 0.4
SNX3-201ENST00000230085 MMP24Q9Y5R2 645 aa17.56■□□□□ 0.4
SNX3-201ENST00000230085 LIPGQ9Y5X9 500 aa17.56■□□□□ 0.4
SNX3-201ENST00000230085 SVILO95425 2214 aa17.56■□□□□ 0.4
SNX3-201ENST00000230085 TRBV23-1A0A0A0MS06 115 aa17.55■□□□□ 0.4
SNX3-201ENST00000230085 FAM166BA8MTA8 275 aa17.55■□□□□ 0.4
SNX3-201ENST00000230085 NPIPA2E9PIF3 369 aa17.55■□□□□ 0.4
SNX3-201ENST00000230085 NPIPA3F8WFD2 350 aa17.55■□□□□ 0.4
SNX3-201ENST00000230085 SPRY1O43609 319 aaPredicted RBP17.55■□□□□ 0.4
SNX3-201ENST00000230085 WISP2O76076 250 aa17.55■□□□□ 0.4
SNX3-201ENST00000230085 NRASP01111 189 aa17.55■□□□□ 0.4
SNX3-201ENST00000230085 DAZAP2Q15038 168 aaPredicted RBP17.55■□□□□ 0.4
SNX3-201ENST00000230085 AKR1C8PQ5T2L2 129 aa17.55■□□□□ 0.4
SNX3-201ENST00000230085 ZNF383Q8NA42 475 aa17.55■□□□□ 0.4
SNX3-201ENST00000230085 OR5D13Q8NGL4 314 aa17.55■□□□□ 0.4
SNX3-201ENST00000230085 OR5C1Q8NGR4 320 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms