RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 HARBI1Q96MB7 349 aa11.87□□□□□ -0.51
TGFBR3-201ENST00000212355 MIOXQ9UGB7 285 aa11.87□□□□□ -0.51
TGFBR3-201ENST00000212355 A0A1W2PN81 502 aa11.87□□□□□ -0.51
TGFBR3-201ENST00000212355 P01737 135 aa11.87□□□□□ -0.51
TGFBR3-201ENST00000212355 GZMMP51124 257 aa11.87□□□□□ -0.51
TGFBR3-201ENST00000212355 VKORC1L1Q8N0U8 176 aa11.87□□□□□ -0.51
TGFBR3-201ENST00000212355 SIPA1L3O60292 1781 aaPredicted RBP11.87□□□□□ -0.51
TGFBR3-201ENST00000212355 DUXBA0A1W2PPF3 345 aa11.87□□□□□ -0.51
TGFBR3-201ENST00000212355 C4orf51C9J302 202 aa11.87□□□□□ -0.51
TGFBR3-201ENST00000212355 FOXS1O43638 330 aa11.87□□□□□ -0.51
TGFBR3-201ENST00000212355 ADAM11O75078 769 aa11.87□□□□□ -0.51
TGFBR3-201ENST00000212355 COL8A1P27658 744 aa11.87□□□□□ -0.51
TGFBR3-201ENST00000212355 EIF3IQ13347 325 aaKnown RBP11.87□□□□□ -0.51
TGFBR3-201ENST00000212355 KCNK7Q9Y2U2 307 aa11.87□□□□□ -0.51
TGFBR3-201ENST00000212355 PAPPA2Q9BXP8 1791 aa11.87□□□□□ -0.51
TGFBR3-201ENST00000212355 HMSDA8MTL9 139 aa11.86□□□□□ -0.51
TGFBR3-201ENST00000212355 RAB29O14966 203 aa11.86□□□□□ -0.51
TGFBR3-201ENST00000212355 ZNF25P17030 456 aaPredicted RBP11.86□□□□□ -0.51
TGFBR3-201ENST00000212355 FAM3BP58499 235 aaPredicted RBP11.86□□□□□ -0.51
TGFBR3-201ENST00000212355 HCP5Q6MZN7 132 aa11.86□□□□□ -0.51
TGFBR3-201ENST00000212355 OR4S2Q8NH73 311 aa11.86□□□□□ -0.51
TGFBR3-201ENST00000212355 SMIM12Q96EX1 92 aa11.86□□□□□ -0.51
TGFBR3-201ENST00000212355 SH3BGRL3Q9H299 93 aa11.86□□□□□ -0.51
TGFBR3-201ENST00000212355 TRBV23-1A0A0A0MS06 115 aa11.86□□□□□ -0.51
TGFBR3-201ENST00000212355 SNAI3Q3KNW1 292 aa11.86□□□□□ -0.51
TGFBR3-201ENST00000212355 C10orf113Q5VZT2 155 aa11.86□□□□□ -0.51
TGFBR3-201ENST00000212355 CCL13Q99616 98 aa11.86□□□□□ -0.51
TGFBR3-201ENST00000212355 ATP6V0CP27449 155 aa11.86□□□□□ -0.51
TGFBR3-201ENST00000212355 FAM209AQ5JX71 171 aa11.86□□□□□ -0.51
TGFBR3-201ENST00000212355 SLC26A10Q8NG04 563 aa11.86□□□□□ -0.51
TGFBR3-201ENST00000212355 ZNF426Q9BUY5 554 aa11.86□□□□□ -0.51
TGFBR3-201ENST00000212355 TDRD15B5MCY1 1934 aaKnown RBP11.86□□□□□ -0.51
TGFBR3-201ENST00000212355 PLXNB2O15031 1838 aa11.86□□□□□ -0.51
TGFBR3-201ENST00000212355 TBX15Q96SF7 602 aa11.86□□□□□ -0.51
TGFBR3-201ENST00000212355 IGHV3OR16-10A0A075B7F0 116 aa11.86□□□□□ -0.51
TGFBR3-201ENST00000212355 IGKV3D-11A0A0A0MRZ8 115 aa11.86□□□□□ -0.51
TGFBR3-201ENST00000212355 CLDN14O95500 239 aa11.86□□□□□ -0.51
TGFBR3-201ENST00000212355 IGKV3-11P04433 115 aa11.86□□□□□ -0.51
TGFBR3-201ENST00000212355 NAT2P11245 290 aa11.86□□□□□ -0.51
TGFBR3-201ENST00000212355 MUC1P15941 1255 aaPredicted RBP11.86□□□□□ -0.51
TGFBR3-201ENST00000212355 SCGB1D4Q6XE38 83 aa11.86□□□□□ -0.51
TGFBR3-201ENST00000212355 CYB561D1Q8N8Q1 229 aa11.86□□□□□ -0.51
TGFBR3-201ENST00000212355 COL11A1P12107 1806 aaPredicted RBP11.85□□□□□ -0.51
TGFBR3-201ENST00000212355 IGHV3OR16-12A0A075B7B8 117 aa11.85□□□□□ -0.51
TGFBR3-201ENST00000212355 TBX19O60806 448 aa11.85□□□□□ -0.51
TGFBR3-201ENST00000212355 NGFRP08138 427 aa11.85□□□□□ -0.51
TGFBR3-201ENST00000212355 Q9N2K0 584 aa11.85□□□□□ -0.51
TGFBR3-201ENST00000212355 TMEM38BQ9NVV0 291 aa11.85□□□□□ -0.51
TGFBR3-201ENST00000212355 TRAV38-1A0A0B4J264 116 aa11.85□□□□□ -0.51
TGFBR3-201ENST00000212355 NMUP48645 174 aa11.85□□□□□ -0.51
TGFBR3-201ENST00000212355 COMPP49747 757 aaPredicted RBP11.85□□□□□ -0.51
TGFBR3-201ENST00000212355 SUCLG1P53597 346 aaKnown RBP11.85□□□□□ -0.51
TGFBR3-201ENST00000212355 APCDD1LQ8NCL9 501 aa11.85□□□□□ -0.51
TGFBR3-201ENST00000212355 OR51B2Q9Y5P1 312 aa11.85□□□□□ -0.51
TGFBR3-201ENST00000212355 F2RL2O00254 374 aa11.85□□□□□ -0.51
TGFBR3-201ENST00000212355 APCSP02743 223 aa11.85□□□□□ -0.51
TGFBR3-201ENST00000212355 GFRA1P56159 465 aa11.85□□□□□ -0.51
TGFBR3-201ENST00000212355 IL24Q13007 206 aa11.85□□□□□ -0.51
TGFBR3-201ENST00000212355 FXYD3Q14802 87 aa11.85□□□□□ -0.51
TGFBR3-201ENST00000212355 GPX7Q96SL4 187 aaPredicted RBP11.85□□□□□ -0.51
TGFBR3-201ENST00000212355 RASL11BQ9BPW5 248 aa11.85□□□□□ -0.51
TGFBR3-201ENST00000212355 KIR2DL1P43626 348 aaPredicted RBP11.85□□□□□ -0.51
TGFBR3-201ENST00000212355 LGALS7P47929 136 aa11.85□□□□□ -0.51
TGFBR3-201ENST00000212355 TWIST1Q15672 202 aa11.85□□□□□ -0.51
TGFBR3-201ENST00000212355 OR8G5Q8NG78 346 aa11.85□□□□□ -0.51
TGFBR3-201ENST00000212355 INSIG2Q9Y5U4 225 aa11.85□□□□□ -0.51
TGFBR3-201ENST00000212355 SPTBP11277 2137 aa11.85□□□□□ -0.51
TGFBR3-201ENST00000212355 HELTA6NFD8 242 aa11.85□□□□□ -0.51
TGFBR3-201ENST00000212355 CD3EP07766 207 aa11.85□□□□□ -0.51
TGFBR3-201ENST00000212355 IRF3Q14653 427 aa11.85□□□□□ -0.51
TGFBR3-201ENST00000212355 TGIF1Q15583 401 aa11.85□□□□□ -0.51
TGFBR3-201ENST00000212355 ZNF343Q6P1L6 599 aa11.85□□□□□ -0.51
TGFBR3-201ENST00000212355 TCF21O43680 179 aa11.84□□□□□ -0.51
TGFBR3-201ENST00000212355 C19orf35Q6ZS72 473 aa11.84□□□□□ -0.51
TGFBR3-201ENST00000212355 TTTY12Q9BZ98 90 aa11.84□□□□□ -0.51
TGFBR3-201ENST00000212355 OR6C3Q9NZP0 311 aa11.84□□□□□ -0.51
TGFBR3-201ENST00000212355 MELTFP08582 738 aa11.84□□□□□ -0.51
TGFBR3-201ENST00000212355 C21orf58P58505 322 aa11.84□□□□□ -0.51
TGFBR3-201ENST00000212355 GABRA6Q16445 453 aa11.84□□□□□ -0.51
TGFBR3-201ENST00000212355 Q5BKY6 102 aa11.84□□□□□ -0.51
TGFBR3-201ENST00000212355 MOB1BQ7L9L4 216 aa11.84□□□□□ -0.51
TGFBR3-201ENST00000212355 OR10C1Q96KK4 312 aa11.84□□□□□ -0.51
TGFBR3-201ENST00000212355 LIFP15018 202 aa11.84□□□□□ -0.51
TGFBR3-201ENST00000212355 PRB3Q04118 309 aaPredicted RBP11.84□□□□□ -0.51
TGFBR3-201ENST00000212355 FUT5Q11128 374 aa11.84□□□□□ -0.51
TGFBR3-201ENST00000212355 OR8B3Q8NGG8 313 aa11.84□□□□□ -0.51
TGFBR3-201ENST00000212355 OR52M1Q8NGK5 317 aa11.84□□□□□ -0.51
TGFBR3-201ENST00000212355 OR2Y1Q8NGV0 311 aa11.84□□□□□ -0.51
TGFBR3-201ENST00000212355 OR8B2Q96RD0 313 aa11.84□□□□□ -0.51
TGFBR3-201ENST00000212355 FKBP11Q9NYL4 201 aa11.84□□□□□ -0.51
TGFBR3-201ENST00000212355 TRBV5-3A0A0A0MS03 114 aa11.84□□□□□ -0.51
TGFBR3-201ENST00000212355 TGIF2-C20orf24A0A0A6YYL0 155 aa11.84□□□□□ -0.51
TGFBR3-201ENST00000212355 MOSPD3O75425 235 aa11.84□□□□□ -0.51
TGFBR3-201ENST00000212355 ADRA2AP08913 450 aa11.84□□□□□ -0.51
TGFBR3-201ENST00000212355 PGLYRP3Q96LB9 341 aa11.84□□□□□ -0.51
TGFBR3-201ENST00000212355 KIF13BQ9NQT8 1826 aa11.84□□□□□ -0.51
TGFBR3-201ENST00000212355 A0A1W2PQF6 199 aa11.84□□□□□ -0.51
TGFBR3-201ENST00000212355 KIR2DS2P43631 304 aa11.84□□□□□ -0.51
TGFBR3-201ENST00000212355 TCTEX1D1Q8N7M0 179 aa11.84□□□□□ -0.51
TGFBR3-201ENST00000212355 PRSS27Q9BQR3 290 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms