RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 TAAR3PQ9P1P4 343 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 PSG11Q9UQ72 335 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 SF3B6Q9Y3B4 125 aaKnown RBP9.16□□□□□ -0.94
VCL-201ENST00000211998 AKAP11Q9UKA4 1901 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 FGF5P12034 268 aa9.15□□□□□ -0.94
VCL-201ENST00000211998 CEACAM16Q2WEN9 425 aa9.15□□□□□ -0.94
VCL-201ENST00000211998 LILRA6Q6PI73 481 aa9.15□□□□□ -0.94
VCL-201ENST00000211998 WNT10AQ9GZT5 417 aa9.15□□□□□ -0.94
VCL-201ENST00000211998 SOX21Q9Y651 276 aaPredicted RBP9.15□□□□□ -0.94
VCL-201ENST00000211998 A0A1B0GU03 582 aa9.15□□□□□ -0.94
VCL-201ENST00000211998 NUTF2P61970 127 aaKnown RBP9.15□□□□□ -0.94
VCL-201ENST00000211998 COL10A1Q03692 680 aa9.15□□□□□ -0.94
VCL-201ENST00000211998 MESTQ5EB52 335 aa9.15□□□□□ -0.94
VCL-201ENST00000211998 Q6ZS52 159 aa9.15□□□□□ -0.94
VCL-201ENST00000211998 RFLNBQ8N5W9 214 aa9.15□□□□□ -0.94
VCL-201ENST00000211998 OR8B12Q8NGG6 310 aa9.15□□□□□ -0.94
VCL-201ENST00000211998 NUP205Q92621 2012 aa9.15□□□□□ -0.94
VCL-201ENST00000211998 GLI3P10071 1580 aa9.15□□□□□ -0.94
VCL-201ENST00000211998 LOC389332A0A1B0GUA5 103 aa9.15□□□□□ -0.94
VCL-201ENST00000211998 CYR61O00622 381 aa9.15□□□□□ -0.94
VCL-201ENST00000211998 HLA-DQA1P01909 254 aa9.15□□□□□ -0.94
VCL-201ENST00000211998 POU2F2P09086 479 aa9.15□□□□□ -0.94
VCL-201ENST00000211998 SRIP30626 198 aa9.15□□□□□ -0.94
VCL-201ENST00000211998 KLF3P57682 345 aaPredicted RBP9.15□□□□□ -0.94
VCL-201ENST00000211998 KIAA1644Q3SXP7 199 aa9.15□□□□□ -0.94
VCL-201ENST00000211998 HIKESHIQ53FT3 197 aa9.15□□□□□ -0.94
VCL-201ENST00000211998 OR13G1Q8NGZ3 307 aa9.15□□□□□ -0.94
VCL-201ENST00000211998 UBTD1Q9HAC8 227 aa9.15□□□□□ -0.94
VCL-201ENST00000211998 DOCK2Q92608 1830 aa9.15□□□□□ -0.94
VCL-201ENST00000211998 TRGV10A0A0A0MS01 117 aa9.15□□□□□ -0.95
VCL-201ENST00000211998 RBP4P02753 201 aa9.15□□□□□ -0.95
VCL-201ENST00000211998 ABHD14AQ9BUJ0 271 aa9.15□□□□□ -0.95
VCL-201ENST00000211998 GPR132Q9UNW8 380 aa9.15□□□□□ -0.95
VCL-201ENST00000211998 AUP1Q9Y679 476 aa9.15□□□□□ -0.95
VCL-201ENST00000211998 LDLRAD4O15165 306 aa9.15□□□□□ -0.95
VCL-201ENST00000211998 MT-CO3P00414 261 aa9.15□□□□□ -0.95
VCL-201ENST00000211998 CD8AP01732 235 aa9.15□□□□□ -0.95
VCL-201ENST00000211998 CD40P25942 277 aa9.15□□□□□ -0.95
VCL-201ENST00000211998 MRGPRFQ96AM1 343 aa9.15□□□□□ -0.95
VCL-201ENST00000211998 GALNT14Q96FL9 552 aa9.15□□□□□ -0.95
VCL-201ENST00000211998 CDC42EP3Q9UKI2 254 aa9.15□□□□□ -0.95
VCL-201ENST00000211998 M0QZ24 198 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 HBZP02008 142 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 ORM2P19652 201 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 MEOX1P50221 254 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 FBLN7Q53RD9 439 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 MRPL37Q9BZE1 423 aaKnown RBP9.14□□□□□ -0.95
VCL-201ENST00000211998 CA6P23280 308 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 ZNF766Q5HY98 468 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 VAX1Q5SQQ9 334 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 LDLRAD2Q5SZI1 272 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 MYOZ3Q8TDC0 251 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 GPBAR1Q8TDU6 330 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 FAM131CQ96AQ9 280 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 FLYWCH2Q96CP2 140 aaKnown RBP9.14□□□□□ -0.95
VCL-201ENST00000211998 WDR34Q96EX3 536 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 GUCD1Q96NT3 240 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 LAMTOR2Q9Y2Q5 125 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 F11RQ9Y624 299 aaKnown RBP9.14□□□□□ -0.95
VCL-201ENST00000211998 SHROOM3Q8TF72 1996 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 SHISA8B8ZZ34 492 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 HLA-DRB1P01911 266 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 CISD3P0C7P0 127 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 ZFP36L2P47974 494 aaKnown RBP9.14□□□□□ -0.95
VCL-201ENST00000211998 MGAT2Q10469 447 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 LRRC10Q5BKY1 277 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 RFESDQ8TAC1 157 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 MISP3Q96FF7 219 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 TMEM56Q96MV1 263 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 FLRT3Q9NZU0 649 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 TMEM238LA0A1B0GVL6 79 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 A6NJY4 79 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 CD1AP06126 327 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 SFTPCP11686 197 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 NPY1RP25929 384 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 Q8WTZ3 238 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 PTX4Q96A99 478 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 TUBA4BQ9H853 241 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 WBP1LQ9NX94 342 aa9.14□□□□□ -0.95
VCL-201ENST00000211998 DLEU1O43261 78 aa9.13□□□□□ -0.95
VCL-201ENST00000211998 BTF3P20290 206 aaKnown RBP9.13□□□□□ -0.95
VCL-201ENST00000211998 ZNF683Q8IZ20 524 aa9.13□□□□□ -0.95
VCL-201ENST00000211998 ZNF785A8K8V0 405 aa9.13□□□□□ -0.95
VCL-201ENST00000211998 NDUFB3O43676 98 aa9.13□□□□□ -0.95
VCL-201ENST00000211998 KLF7O75840 302 aaPredicted RBP9.13□□□□□ -0.95
VCL-201ENST00000211998 AMY1AP04745 511 aa9.13□□□□□ -0.95
VCL-201ENST00000211998 PGLYRP3Q96LB9 341 aa9.13□□□□□ -0.95
VCL-201ENST00000211998 ALKBH3Q96Q83 286 aaPredicted RBP9.13□□□□□ -0.95
VCL-201ENST00000211998 UFC1Q9Y3C8 167 aa9.13□□□□□ -0.95
VCL-201ENST00000211998 URB1O60287 2271 aaKnown RBP9.13□□□□□ -0.95
VCL-201ENST00000211998 MEX3AA1L020 520 aaKnown RBP9.13□□□□□ -0.95
VCL-201ENST00000211998 CTSVO60911 334 aa9.13□□□□□ -0.95
VCL-201ENST00000211998 NUDT3O95989 172 aa9.13□□□□□ -0.95
VCL-201ENST00000211998 SMIM13P0DJ93 91 aa9.13□□□□□ -0.95
VCL-201ENST00000211998 DLX1P56177 255 aa9.13□□□□□ -0.95
VCL-201ENST00000211998 GNG3P63215 75 aa9.13□□□□□ -0.95
VCL-201ENST00000211998 FOXC1Q12948 553 aa9.13□□□□□ -0.95
VCL-201ENST00000211998 SSPNQ14714 243 aa9.13□□□□□ -0.95
VCL-201ENST00000211998 SPATA46Q5T0L3 261 aa9.13□□□□□ -0.95
VCL-201ENST00000211998 C1orf53Q5VUE5 145 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms