RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 CST4P01036 141 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 SMIM17P0DL12 118 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 PPIAL4GP0DN37 164 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 CTRB1P17538 263 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 RPS4XP62701 263 aaKnown RBP8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 RHOBP62745 196 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 ECSCRQ19T08 205 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 SLC25A53Q5H9E4 307 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 CTRB2Q6GPI1 263 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 PGLYRP3Q96LB9 341 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 ZNF629Q9UEG4 869 aaPredicted RBP8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 ZMIZ1Q9ULJ6 1067 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 RLFQ13129 1914 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 LOC105371242A0A075B767 164 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 TRBV5-5A0A0J9YX44 114 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 LY6DQ14210 128 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 FAM122BQ7Z309 247 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 RFLNBQ8N5W9 214 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 TMEM208Q9BTX3 173 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 SH2D2AQ9NP31 389 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 SLC2A9Q9NRM0 540 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 FAM206AQ9NX38 181 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 C17orf51A8MQB3 221 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 LEUTXA8MZ59 168 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 RAB32Q13637 225 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 FAM219AQ8IW50 185 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 ST8SIA2Q92186 375 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 SAV1Q9H4B6 383 aaPredicted RBP8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 NUPL2O15504 423 aaKnown RBP8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 ZNHIT1O43257 154 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 HBZP02008 142 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 REG1BP48304 166 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 BAGE3Q86Y29 109 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 BAGE2Q86Y30 109 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 TPRX1Q8N7U7 411 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 DTD1Q8TEA8 209 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 Q8WTZ3 238 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 DYRK2Q92630 601 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 SMIM7Q9BQ49 75 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 HILPDAQ9Y5L2 63 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 CACNA1EQ15878 2313 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 ZNF90Q03938 601 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 SEZ6L2Q6UXD5 910 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 MITD1Q8WV92 249 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 A0A1W2PPE3 182 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 E9PLN8 166 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 FCGR3AP08637 254 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 FAM3AP98173 230 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 DYNLRB2Q8TF09 96 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 VKORC1Q9BQB6 163 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 MGAMO43451 1857 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 FAM24AA6NFZ4 105 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 ORM2P19652 201 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 IL24Q13007 206 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 TMEM30BQ3MIR4 351 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 CLEC18BQ6UXF7 455 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 ZNF561Q8N587 486 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 RXFP4Q8TDU9 374 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 DHRS9Q9BPW9 319 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 NINQ8N4C6 2090 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 DOCK6Q96HP0 2047 aa8.93□□□□□ -0.98
NIPAL3-201ENST00000003912 S100A8P05109 93 aa8.92□□□□□ -0.98
NIPAL3-201ENST00000003912 PRR27Q6MZM9 219 aa8.92□□□□□ -0.98
NIPAL3-201ENST00000003912 PRSS54Q6PEW0 395 aa8.92□□□□□ -0.98
NIPAL3-201ENST00000003912 TCTE3Q8IZS6 198 aa8.92□□□□□ -0.98
NIPAL3-201ENST00000003912 SERTM2A0A1B0GWG4 89 aa8.92□□□□□ -0.98
NIPAL3-201ENST00000003912 LOC390937A0A1W2PQ73 354 aa8.92□□□□□ -0.98
NIPAL3-201ENST00000003912 HPRT1P00492 218 aa8.92□□□□□ -0.98
NIPAL3-201ENST00000003912 LIPFP07098 398 aa8.92□□□□□ -0.98
NIPAL3-201ENST00000003912 CECR9P0C854 216 aa8.92□□□□□ -0.98
NIPAL3-201ENST00000003912 ST3GAL2Q16842 350 aa8.92□□□□□ -0.98
NIPAL3-201ENST00000003912 C9orf106Q8NAJ2 232 aa8.92□□□□□ -0.98
NIPAL3-201ENST00000003912 IDI2-AS1Q9NZ38 188 aa8.92□□□□□ -0.98
NIPAL3-201ENST00000003912 EP300Q09472 2414 aaPredicted RBP8.92□□□□□ -0.98
NIPAL3-201ENST00000003912 ODAMA1E959 279 aa8.92□□□□□ -0.98
NIPAL3-201ENST00000003912 SLC25A5P05141 298 aaKnown RBP8.92□□□□□ -0.98
NIPAL3-201ENST00000003912 GZMKP49863 264 aa8.92□□□□□ -0.98
NIPAL3-201ENST00000003912 PAFAH1B2P68402 229 aa8.92□□□□□ -0.98
NIPAL3-201ENST00000003912 OR1L6Q8NGR2 347 aa8.92□□□□□ -0.98
NIPAL3-201ENST00000003912 TVP23CQ96ET8 276 aa8.92□□□□□ -0.98
NIPAL3-201ENST00000003912 SIRT4Q9Y6E7 314 aaPredicted RBP8.92□□□□□ -0.98
NIPAL3-201ENST00000003912 TPRP12270 2363 aaKnown RBP8.92□□□□□ -0.98
NIPAL3-201ENST00000003912 HTR1DP28221 377 aa8.92□□□□□ -0.98
NIPAL3-201ENST00000003912 LHX2P50458 406 aa8.92□□□□□ -0.98
NIPAL3-201ENST00000003912 CLDN18P56856 261 aa8.92□□□□□ -0.98
NIPAL3-201ENST00000003912 BSPH1Q075Z2 132 aa8.92□□□□□ -0.98
NIPAL3-201ENST00000003912 SLC25A22Q9H936 323 aa8.92□□□□□ -0.98
NIPAL3-201ENST00000003912 RALYQ9UKM9 306 aaKnown RBP8.92□□□□□ -0.98
NIPAL3-201ENST00000003912 NEUROG3Q9Y4Z2 214 aa8.92□□□□□ -0.98
NIPAL3-201ENST00000003912 MPC2O95563 127 aa8.91□□□□□ -0.98
NIPAL3-201ENST00000003912 H3F3CQ6NXT2 135 aa8.91□□□□□ -0.98
NIPAL3-201ENST00000003912 OR1B1Q8NGR6 318 aa8.91□□□□□ -0.98
NIPAL3-201ENST00000003912 FAM131CQ96AQ9 280 aa8.91□□□□□ -0.98
NIPAL3-201ENST00000003912 GAB2Q9UQC2 676 aa8.91□□□□□ -0.98
NIPAL3-201ENST00000003912 MSRB2Q9Y3D2 182 aa8.91□□□□□ -0.98
NIPAL3-201ENST00000003912 A0A1B0GU03 582 aa8.91□□□□□ -0.98
NIPAL3-201ENST00000003912 PPP5D1E7EU14 171 aa8.91□□□□□ -0.98
NIPAL3-201ENST00000003912 RAMP1O60894 148 aa8.91□□□□□ -0.98
NIPAL3-201ENST00000003912 SPP1P10451 314 aa8.91□□□□□ -0.98
NIPAL3-201ENST00000003912 POLR2GP62487 172 aaKnown RBP eCLIP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms