RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 BlkP16277 499 aa13.73□□□□□ -0.21
Trim39-203ENSMUST00000113706 Zfp82Q6P9Y7 530 aa13.73□□□□□ -0.21
Trim39-203ENSMUST00000113706 Olfr1466Q8VFW4 310 aa13.73□□□□□ -0.21
Trim39-203ENSMUST00000113706 Mrps30Q9D0G0 442 aaKnown RBP13.73□□□□□ -0.21
Trim39-203ENSMUST00000113706 Spsb1Q9D5L7 273 aa13.73□□□□□ -0.21
Trim39-203ENSMUST00000113706 Igkv14-111A0A140T8P9 117 aa13.72□□□□□ -0.21
Trim39-203ENSMUST00000113706 H2-EaP01904 255 aa13.72□□□□□ -0.21
Trim39-203ENSMUST00000113706 P04224 255 aa13.72□□□□□ -0.21
Trim39-203ENSMUST00000113706 MgmtP26187 211 aa13.72□□□□□ -0.21
Trim39-203ENSMUST00000113706 Tcf7Q00417 419 aa13.72□□□□□ -0.21
Trim39-203ENSMUST00000113706 Nkain2Q4PNJ2 208 aa13.72□□□□□ -0.21
Trim39-203ENSMUST00000113706 Vash1Q8C1W1 375 aa13.72□□□□□ -0.21
Trim39-203ENSMUST00000113706 Nupl2Q8CIC2 420 aaKnown RBP13.72□□□□□ -0.21
Trim39-203ENSMUST00000113706 Swsap1Q8VCI7 278 aa13.72□□□□□ -0.21
Trim39-203ENSMUST00000113706 Olfr1424Q8VFV1 313 aa13.72□□□□□ -0.21
Trim39-203ENSMUST00000113706 Gm10376D3YXI8 184 aa13.72□□□□□ -0.21
Trim39-203ENSMUST00000113706 Gm4181E9Q7X3 184 aa13.72□□□□□ -0.21
Trim39-203ENSMUST00000113706 Olfr173E9QAT7 321 aa13.72□□□□□ -0.21
Trim39-203ENSMUST00000113706 Gm10375L7N286 184 aa13.72□□□□□ -0.21
Trim39-203ENSMUST00000113706 GusbP12265 648 aa13.72□□□□□ -0.21
Trim39-203ENSMUST00000113706 PtgfrP43117 366 aa13.72□□□□□ -0.21
Trim39-203ENSMUST00000113706 Rab1AP62821 205 aa13.72□□□□□ -0.21
Trim39-203ENSMUST00000113706 GalnsQ571E4 520 aa13.72□□□□□ -0.21
Trim39-203ENSMUST00000113706 Clvs2Q8BG92 327 aa13.72□□□□□ -0.21
Trim39-203ENSMUST00000113706 Gpr89aQ8BS95 455 aa13.72□□□□□ -0.21
Trim39-203ENSMUST00000113706 Olfr1388Q8VFA3 311 aa13.72□□□□□ -0.21
Trim39-203ENSMUST00000113706 Olfr1044Q8VGR9 314 aa13.72□□□□□ -0.21
Trim39-203ENSMUST00000113706 Pla1aQ8VI78 456 aa13.72□□□□□ -0.21
Trim39-203ENSMUST00000113706 1700001F09RikQ9DAR5 184 aa13.72□□□□□ -0.21
Trim39-203ENSMUST00000113706 DiabloQ9JIQ3 237 aa13.72□□□□□ -0.21
Trim39-203ENSMUST00000113706 Nprl2Q9WUE4 380 aa13.72□□□□□ -0.21
Trim39-203ENSMUST00000113706 Ndufa7Q9Z1P6 113 aaKnown RBP13.72□□□□□ -0.21
Trim39-203ENSMUST00000113706 A0A1Y7VIT9 351 aa13.71□□□□□ -0.21
Trim39-203ENSMUST00000113706 Pusl1A2ADA5 291 aa13.71□□□□□ -0.21
Trim39-203ENSMUST00000113706 Gm12666A2AMD0 254 aaKnown RBP13.71□□□□□ -0.21
Trim39-203ENSMUST00000113706 Spink14B9EJP9 96 aa13.71□□□□□ -0.21
Trim39-203ENSMUST00000113706 Mcpt9O35164 246 aa13.71□□□□□ -0.21
Trim39-203ENSMUST00000113706 DhodhO35435 395 aa13.71□□□□□ -0.21
Trim39-203ENSMUST00000113706 Prss39O70169 367 aa13.71□□□□□ -0.21
Trim39-203ENSMUST00000113706 H2-Q10P01898 325 aa13.71□□□□□ -0.21
Trim39-203ENSMUST00000113706 NrasP08556 189 aa13.71□□□□□ -0.21
Trim39-203ENSMUST00000113706 Olfr1058Q7TR74 316 aa13.71□□□□□ -0.21
Trim39-203ENSMUST00000113706 Sec22aQ8BH47 307 aa13.71□□□□□ -0.21
Trim39-203ENSMUST00000113706 Tmem19Q91W52 336 aa13.71□□□□□ -0.21
Trim39-203ENSMUST00000113706 Vgll1Q99NC0 307 aa13.71□□□□□ -0.21
Trim39-203ENSMUST00000113706 NmbQ9CR53 121 aa13.71□□□□□ -0.21
Trim39-203ENSMUST00000113706 Fxyd6Q9D164 94 aa13.71□□□□□ -0.21
Trim39-203ENSMUST00000113706 Asb5Q9D1A4 329 aa13.71□□□□□ -0.21
Trim39-203ENSMUST00000113706 Znf593Q9DB42 134 aaKnown RBP13.71□□□□□ -0.21
Trim39-203ENSMUST00000113706 Olfr951Q9EQ94 314 aa13.71□□□□□ -0.21
Trim39-203ENSMUST00000113706 Wnt16Q9QYS1 364 aa13.71□□□□□ -0.21
Trim39-203ENSMUST00000113706 Bcl2l11O54918 196 aa13.71□□□□□ -0.21
Trim39-203ENSMUST00000113706 BidP70444 195 aa13.71□□□□□ -0.21
Trim39-203ENSMUST00000113706 Vax1Q2NKI2 338 aa13.71□□□□□ -0.21
Trim39-203ENSMUST00000113706 Zfp874bQ7M6X2 447 aa13.71□□□□□ -0.21
Trim39-203ENSMUST00000113706 Olfr487Q7TRU9 314 aa13.71□□□□□ -0.21
Trim39-203ENSMUST00000113706 Tmem230Q8CIB6 120 aa13.71□□□□□ -0.21
Trim39-203ENSMUST00000113706 Olfr483Q8VG05 315 aa13.71□□□□□ -0.21
Trim39-203ENSMUST00000113706 SclyQ9JLI6 432 aa13.71□□□□□ -0.21
Trim39-203ENSMUST00000113706 4930435E12RikA6X8Z9 381 aa13.71□□□□□ -0.22
Trim39-203ENSMUST00000113706 Gm3685J3QPP2 205 aa13.71□□□□□ -0.22
Trim39-203ENSMUST00000113706 Ap2s1P62743 142 aa13.71□□□□□ -0.22
Trim39-203ENSMUST00000113706 A230072I06RikQ3UUJ8 172 aa13.71□□□□□ -0.22
Trim39-203ENSMUST00000113706 Trav5d-4Q5R1F6 114 aa13.71□□□□□ -0.22
Trim39-203ENSMUST00000113706 Rasl10bQ5SSG5 203 aa13.71□□□□□ -0.22
Trim39-203ENSMUST00000113706 Olfr32Q7TQZ0 308 aa13.71□□□□□ -0.22
Trim39-203ENSMUST00000113706 MastlQ8C0P0 865 aa13.71□□□□□ -0.22
Trim39-203ENSMUST00000113706 Olfr493Q8VEW5 314 aa13.71□□□□□ -0.22
Trim39-203ENSMUST00000113706 Olfr974Q8VH09 310 aa13.71□□□□□ -0.22
Trim39-203ENSMUST00000113706 Znf672Q99LH4 468 aa13.71□□□□□ -0.22
Trim39-203ENSMUST00000113706 Tceal6Q9DB24 200 aa13.71□□□□□ -0.22
Trim39-203ENSMUST00000113706 Mrps15Q9DC71 258 aaKnown RBP13.71□□□□□ -0.22
Trim39-203ENSMUST00000113706 RelnQ60841 3461 aa13.7□□□□□ -0.22
Trim39-203ENSMUST00000113706 Olfr455A0A0B4J1M2 317 aa13.7□□□□□ -0.22
Trim39-203ENSMUST00000113706 Vmn2r47K7N709 852 aa13.7□□□□□ -0.22
Trim39-203ENSMUST00000113706 Alox12bO70582 701 aa13.7□□□□□ -0.22
Trim39-203ENSMUST00000113706 Galr1P56479 348 aa13.7□□□□□ -0.22
Trim39-203ENSMUST00000113706 St6galnac2P70277 373 aa13.7□□□□□ -0.22
Trim39-203ENSMUST00000113706 Otx1P80205 355 aa13.7□□□□□ -0.22
Trim39-203ENSMUST00000113706 Mbd6Q3TY92 1003 aa13.7□□□□□ -0.22
Trim39-203ENSMUST00000113706 Prdm6Q3UZD5 596 aa13.7□□□□□ -0.22
Trim39-203ENSMUST00000113706 Znf250Q7TNU6 535 aa13.7□□□□□ -0.22
Trim39-203ENSMUST00000113706 Plekhm1Q7TSI1 1074 aa13.7□□□□□ -0.22
Trim39-203ENSMUST00000113706 Lgi3Q8K406 548 aa13.7□□□□□ -0.22
Trim39-203ENSMUST00000113706 Klhdc3Q8VEM9 382 aa13.7□□□□□ -0.22
Trim39-203ENSMUST00000113706 Pga5Q9D106 387 aa13.7□□□□□ -0.22
Trim39-203ENSMUST00000113706 S100a16Q9D708 124 aa13.7□□□□□ -0.22
Trim39-203ENSMUST00000113706 Cml5Q9QXS8 227 aa13.7□□□□□ -0.22
Trim39-203ENSMUST00000113706 SetxA2AKX3 2646 aa13.7□□□□□ -0.22
Trim39-203ENSMUST00000113706 FggyA2AJL3 552 aa13.7□□□□□ -0.22
Trim39-203ENSMUST00000113706 Prrt1O35449 306 aa13.7□□□□□ -0.22
Trim39-203ENSMUST00000113706 Mrpl23O35972 146 aaKnown RBP13.7□□□□□ -0.22
Trim39-203ENSMUST00000113706 Tcl1b1P56840 116 aa13.7□□□□□ -0.22
Trim39-203ENSMUST00000113706 G430049J08RikQ3TL09 166 aa13.7□□□□□ -0.22
Trim39-203ENSMUST00000113706 Zfp772Q3UQL6 416 aa13.7□□□□□ -0.22
Trim39-203ENSMUST00000113706 Olfr259Q7TS20 312 aa13.7□□□□□ -0.22
Trim39-203ENSMUST00000113706 Bdh1Q80XN0 343 aa13.7□□□□□ -0.22
Trim39-203ENSMUST00000113706 Fam210aQ8BGY7 273 aa13.7□□□□□ -0.22
Trim39-203ENSMUST00000113706 Nmnat2Q8BNJ3 307 aa13.7□□□□□ -0.22
Trim39-203ENSMUST00000113706 Wdr13Q91V09 485 aa13.7□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms