RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 Ppp1r3eQ8BRJ4 279 aa11.16□□□□□ -0.62
Ssh1-202ENSMUST00000112298 Dusp22Q99N11 184 aa11.16□□□□□ -0.62
Ssh1-202ENSMUST00000112298 Ifitm3Q9CQW9 137 aa11.16□□□□□ -0.62
Ssh1-202ENSMUST00000112298 Wdr4Q9EP82 413 aa11.16□□□□□ -0.62
Ssh1-202ENSMUST00000112298 Scn4aQ9ER60 1841 aa11.15□□□□□ -0.62
Ssh1-202ENSMUST00000112298 Zfp109A0A0U1RPC5 652 aa11.15□□□□□ -0.62
Ssh1-202ENSMUST00000112298 Gm35060A0A140LIV7 231 aa11.15□□□□□ -0.62
Ssh1-202ENSMUST00000112298 Gm4175D3YTW8 314 aa11.15□□□□□ -0.62
Ssh1-202ENSMUST00000112298 Ankrd29D3YVV3 309 aa11.15□□□□□ -0.62
Ssh1-202ENSMUST00000112298 Slco5a1E9PVD9 850 aa11.15□□□□□ -0.62
Ssh1-202ENSMUST00000112298 Vmn1r114L7N226 321 aa11.15□□□□□ -0.62
Ssh1-202ENSMUST00000112298 Vmn1r126L7N2C8 321 aa11.15□□□□□ -0.62
Ssh1-202ENSMUST00000112298 H2-DMaP28078 261 aa11.15□□□□□ -0.62
Ssh1-202ENSMUST00000112298 Tmem211Q3UUA0 195 aa11.15□□□□□ -0.62
Ssh1-202ENSMUST00000112298 Olfr1238Q8VG59 315 aa11.15□□□□□ -0.62
Ssh1-202ENSMUST00000112298 Clec6aQ9JKF4 209 aa11.15□□□□□ -0.62
Ssh1-202ENSMUST00000112298 Pard6aQ9Z101 346 aa11.15□□□□□ -0.62
Ssh1-202ENSMUST00000112298 Gm10036E9PYL9 178 aaKnown RBP11.15□□□□□ -0.62
Ssh1-202ENSMUST00000112298 Gm8660K7N6J2 305 aa11.15□□□□□ -0.62
Ssh1-202ENSMUST00000112298 BglapP86546 95 aa11.15□□□□□ -0.62
Ssh1-202ENSMUST00000112298 Bglap2P86547 95 aa11.15□□□□□ -0.62
Ssh1-202ENSMUST00000112298 Sec14l3Q5SQ27 401 aa11.15□□□□□ -0.62
Ssh1-202ENSMUST00000112298 HrasQ61411 189 aa11.15□□□□□ -0.62
Ssh1-202ENSMUST00000112298 Flrt1Q6RKD8 674 aa11.15□□□□□ -0.62
Ssh1-202ENSMUST00000112298 Olfr786Q8VFH8 312 aa11.15□□□□□ -0.62
Ssh1-202ENSMUST00000112298 GrprP21729 384 aa11.15□□□□□ -0.62
Ssh1-202ENSMUST00000112298 MamstrQ0ZCJ7 421 aa11.15□□□□□ -0.62
Ssh1-202ENSMUST00000112298 4930512M02RikQ5SQK8 218 aa11.15□□□□□ -0.62
Ssh1-202ENSMUST00000112298 Olfr591Q7TRR7 314 aa11.15□□□□□ -0.62
Ssh1-202ENSMUST00000112298 Zfp52Q8BJ45 724 aa11.15□□□□□ -0.62
Ssh1-202ENSMUST00000112298 Chac2Q9CQG1 178 aa11.15□□□□□ -0.62
Ssh1-202ENSMUST00000112298 Nicn1Q9CQM0 213 aa11.15□□□□□ -0.62
Ssh1-202ENSMUST00000112298 Slc37a2Q9WU81 501 aa11.15□□□□□ -0.62
Ssh1-202ENSMUST00000112298 Vsig2Q9Z109 328 aa11.15□□□□□ -0.62
Ssh1-202ENSMUST00000112298 Zbtb34A2ATY4 518 aa11.15□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Zbtb25G3UW50 439 aa11.15□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Cdk2ap1O35207 114 aa11.15□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Irs3O54718 495 aa11.15□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Fut9O88819 359 aa11.15□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Hoxd9P28357 339 aa11.15□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Hist1h3aP68433 136 aa11.15□□□□□ -0.63
Ssh1-202ENSMUST00000112298 F13bQ07968 669 aa11.15□□□□□ -0.63
Ssh1-202ENSMUST00000112298 1700012B07RikQ3V0S8 276 aa11.15□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Abhd16bQ80YU0 474 aa11.15□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Pdlim5Q8CI51 591 aaKnown RBP11.15□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Olfr214Q8VG27 320 aa11.15□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Nudt16l1Q8VHN8 211 aaKnown RBP11.15□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Rbm24D3Z4I3 236 aaKnown RBP11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Zfp229E9PWT2 705 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Zfp688E9Q5M9 274 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Prss38Q3UKY7 322 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Npy6rQ61212 371 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Plet1Q8VEN2 237 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Chrdl1Q920C1 447 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Dgat2l6A2ADU8 337 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Ear2P97425 156 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Kdm4dQ3U2K5 510 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Fam196aQ3USH1 422 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Usf1Q61069 310 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Fxyd3Q61835 88 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Olfr344Q8VFP9 309 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Olfr638Q8VH20 321 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Atp6v1fQ9D1K2 119 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Ighv5-2A0A0A6YVX8 117 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Gm13723A0A1L1SUP2 315 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Gm2663F6R7E8 247 aaKnown RBP11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Dhrs3O88876 302 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Pax5Q02650 391 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Gm10840Q3V2K9 103 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Lcn12Q6JVL5 193 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 1810009J06RikQ9CPN7 247 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Spint2Q9WU03 252 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Vmn1r177E9PXM3 309 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Ankrd65F6YK91 380 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Rab7aP51150 207 aaKnown RBP11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 ScimpQ3UU41 150 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Olfr995Q8VF74 315 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Olfr1342Q8VFY3 315 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Ppil1Q9D0W5 166 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 P2rx4Q9JJX6 388 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Gm21783J3QM57 227 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Vmn1r170K7N6W9 304 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Wdr34Q5U4F6 535 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 C130079G13RikQ8BUY2 280 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Ip6k3Q8BWD2 396 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Wfikkn1Q8R0S6 552 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Olfr303Q8VFP0 319 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Gorasp2Q99JX3 451 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 ManfQ9CXI5 179 aaKnown RBP11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Pycr3Q9DCC4 274 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Izumo1rQ9EQF4 244 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 SrfQ9JM73 504 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Mfap5Q9QZJ6 164 aa11.14□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Gm20834J3QM72 227 aa11.13□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Mcpt8P43430 247 aa11.13□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Col9a2Q07643 688 aa11.13□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Mbd3l2Q3UXB0 228 aa11.13□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Thap4Q6P3Z3 569 aa11.13□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Rnps1Q99M28 305 aaKnown RBP11.13□□□□□ -0.63
Ssh1-202ENSMUST00000112298 Olfr157Q9QZ20 318 aa11.13□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 40.5 ms