RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Znf593Q9DB42 134 aaKnown RBP7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Gpx2Q9JHC0 190 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Slc2a8Q9JIF3 477 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 IckQ9JKV2 629 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Slc25a15Q9WVD5 301 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Dopey1Q8BL99 2399 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Olfr1129A2AV41 314 aa7.46□□□□□ -1.21
Trim39-201ENSMUST00000042717 Olfr914E9PW59 316 aa7.46□□□□□ -1.21
Trim39-201ENSMUST00000042717 Gm21761J3QK00 171 aa7.46□□□□□ -1.21
Trim39-201ENSMUST00000042717 Vmn2r58K7N6V2 862 aa7.46□□□□□ -1.21
Trim39-201ENSMUST00000042717 MstnO08689 376 aa7.46□□□□□ -1.21
Trim39-201ENSMUST00000042717 Pfdn2O70591 154 aa7.46□□□□□ -1.21
Trim39-201ENSMUST00000042717 Ccr8P56484 353 aa7.46□□□□□ -1.21
Trim39-201ENSMUST00000042717 UngP97931 306 aa7.46□□□□□ -1.21
Trim39-201ENSMUST00000042717 Fam57aQ5ND56 257 aa7.46□□□□□ -1.21
Trim39-201ENSMUST00000042717 Oxgr1Q6IYF8 337 aa7.46□□□□□ -1.21
Trim39-201ENSMUST00000042717 Tm7sf2Q71KT5 418 aa7.46□□□□□ -1.21
Trim39-201ENSMUST00000042717 Obp2aQ8K1H9 176 aa7.46□□□□□ -1.21
Trim39-201ENSMUST00000042717 Neil1Q8K4Q6 389 aa7.46□□□□□ -1.21
Trim39-201ENSMUST00000042717 Mitd1Q8VDV8 249 aa7.46□□□□□ -1.21
Trim39-201ENSMUST00000042717 Olfr995Q8VF74 315 aa7.46□□□□□ -1.21
Trim39-201ENSMUST00000042717 Ykt6Q9CQW1 198 aa7.46□□□□□ -1.21
Trim39-201ENSMUST00000042717 Q9DAE8 263 aa7.46□□□□□ -1.21
Trim39-201ENSMUST00000042717 FetubQ9QXC1 388 aa7.46□□□□□ -1.21
Trim39-201ENSMUST00000042717 Timm8a1Q9WVA2 97 aa7.46□□□□□ -1.21
Trim39-201ENSMUST00000042717 Gm10778A0A087WNP5 499 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Smim18J3QNP2 93 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 EhfO70273 300 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Ca2P00920 260 aaKnown RBP7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Saa2P05367 122 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 CcnjQ3TZI6 379 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Q3U1D9 316 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Thap4Q6P3Z3 569 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 P4ha3Q6W3F0 542 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Tmprss11gQ8BZ10 417 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Rbm14Q8C2Q3 669 aaKnown RBP7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Nt5mQ8VCE6 220 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Fyttd1Q91Z49 317 aaKnown RBP7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Olfr73Q920P2 313 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 DohhQ99LN9 302 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Zbtb32Q9JKD9 465 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Ros1Q78DX7 2340 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Igkv4-80A0A075B5L7 116 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm42543A0A0G2JET4 117 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 4930433I11RikA0A0U1RPT6 723 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Sult2a3D3Z1W5 285 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm21560D3Z7A4 205 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Ms4a18J3QN01 344 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm16434J3QN10 205 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 4930555G01RikL7N253 205 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 GzmbP04187 247 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 GipP48756 144 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Rab2bP59279 216 aaKnown RBP7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Otx1P80205 355 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Pax8Q00288 457 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Defb33Q30KN3 62 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Lrrc75aQ7TSF4 339 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 PirtQ8BFY0 135 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Zfp189Q8BKP2 608 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Ubqln3Q8C5U9 658 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Olfr1038Q8VGS1 319 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Cox4i2Q91W29 172 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Exosc4Q921I9 245 aaKnown RBP7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Loxl4Q924C6 757 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Olfr944Q9EQ91 311 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Sp6Q9ESX2 376 aa7.46□□□□□ -1.22
Trim39-201ENSMUST00000042717 Ankrd11E9Q4F7 2643 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Olfr1337A2ACY8 315 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm14443A2ARX0 610 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 4930435E12RikA6X8Z9 381 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Zfp976E9Q981 636 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 H2-M11F6U8V3 335 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Lbhd2G3UW55 114 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Olfr152G3X9L8 316 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Olfr194L7N1Y8 306 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Olfr203L7N205 307 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Efna4O08542 206 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Wdr1O88342 606 aaKnown RBP7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Scand1Q2M4I6 142 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Hand1Q64279 216 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 ToxQ66JW3 526 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Utf1Q6J1H4 339 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Sat2Q6P8J2 170 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Rpl35Q6ZWV7 123 aaKnown RBP7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Alkal2Q80UG6 151 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Vmn1r228Q8R2A7 333 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Vmn1r19Q8R2C7 308 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Olfr734Q8VFT4 313 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Olfr1301Q8VGE7 312 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Dyrk3Q922Y0 586 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Klrc3Q9QXN7 221 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Clec4dQ9Z2H6 219 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm17087V9GXQ2 156 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Ighv5-4A0A075B5P9 117 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm28961A0A087WPA5 222 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Igkv1-135A0A0B4J1H7 120 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm7929A0A286YDV3 213 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Ube2ql1A0PJN4 161 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Siglec15A7E1W8 342 aa7.45□□□□□ -1.22
Trim39-201ENSMUST00000042717 Vmn1r174E9PYW5 313 aa7.45□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 50.6 ms