RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 ERRFI1Q9UJM3 462 aaPredicted RBP14.33□□□□□ -0.12
PHGDH-223ENST00000641597 PCNX2A6NKB5 2137 aa14.33□□□□□ -0.12
PHGDH-223ENST00000641597 PGLYRP1O75594 196 aaPredicted RBP14.32□□□□□ -0.12
PHGDH-223ENST00000641597 HAGHQ16775 308 aa14.32□□□□□ -0.12
PHGDH-223ENST00000641597 SHEQ5VZ18 495 aa14.32□□□□□ -0.12
PHGDH-223ENST00000641597 DHRS13Q6UX07 377 aa14.32□□□□□ -0.12
PHGDH-223ENST00000641597 TMPRSS7Q7RTY8 843 aa14.32□□□□□ -0.12
PHGDH-223ENST00000641597 IQCF2Q8IXL9 164 aa14.32□□□□□ -0.12
PHGDH-223ENST00000641597 LINC00470Q9BZP3 86 aa14.32□□□□□ -0.12
PHGDH-223ENST00000641597 SMCO4Q9NRQ5 59 aa14.32□□□□□ -0.12
PHGDH-223ENST00000641597 PUS1Q9Y606 427 aaKnown RBP eCLIP14.32□□□□□ -0.12
PHGDH-223ENST00000641597 KPTNQ9Y664 436 aa14.32□□□□□ -0.12
PHGDH-223ENST00000641597 ATP23Q9Y6H3 246 aa14.32□□□□□ -0.12
PHGDH-223ENST00000641597 MGAQ8IWI9 3026 aa14.32□□□□□ -0.12
PHGDH-223ENST00000641597 USF3Q68DE3 2245 aa14.32□□□□□ -0.12
PHGDH-223ENST00000641597 TUSC2O75896 110 aa14.32□□□□□ -0.12
PHGDH-223ENST00000641597 TFF1P04155 84 aa14.32□□□□□ -0.12
PHGDH-223ENST00000641597 PSG2P11465 335 aa14.32□□□□□ -0.12
PHGDH-223ENST00000641597 LMO1P25800 156 aa14.32□□□□□ -0.12
PHGDH-223ENST00000641597 MEOX1P50221 254 aa14.32□□□□□ -0.12
PHGDH-223ENST00000641597 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.32□□□□□ -0.12
PHGDH-223ENST00000641597 WDR86Q86TI4 376 aa14.32□□□□□ -0.12
PHGDH-223ENST00000641597 ZNF295-AS1Q8N0V1 137 aa14.32□□□□□ -0.12
PHGDH-223ENST00000641597 FAM24BQ8N5W8 94 aa14.32□□□□□ -0.12
PHGDH-223ENST00000641597 DEFB123Q8N688 67 aa14.32□□□□□ -0.12
PHGDH-223ENST00000641597 TECTBQ96PL2 329 aa14.32□□□□□ -0.12
PHGDH-223ENST00000641597 STRADBQ9C0K7 418 aa14.32□□□□□ -0.12
PHGDH-223ENST00000641597 FAM86C1Q9NVL1 165 aa14.32□□□□□ -0.12
PHGDH-223ENST00000641597 B4GALT7Q9UBV7 327 aa14.32□□□□□ -0.12
PHGDH-223ENST00000641597 SS18L1O75177 396 aaPredicted RBP14.31□□□□□ -0.12
PHGDH-223ENST00000641597 PAX9P55771 341 aa14.31□□□□□ -0.12
PHGDH-223ENST00000641597 UCP2P55851 309 aa14.31□□□□□ -0.12
PHGDH-223ENST00000641597 PMP22Q01453 160 aa14.31□□□□□ -0.12
PHGDH-223ENST00000641597 HNF4GQ14541 408 aa14.31□□□□□ -0.12
PHGDH-223ENST00000641597 RBMS3Q6XE24 437 aaKnown RBP14.31□□□□□ -0.12
PHGDH-223ENST00000641597 IER2Q9BTL4 223 aa14.31□□□□□ -0.12
PHGDH-223ENST00000641597 DOCK11Q5JSL3 2073 aa14.31□□□□□ -0.12
PHGDH-223ENST00000641597 CNOT1A5YKK6 2376 aaKnown RBP14.31□□□□□ -0.12
PHGDH-223ENST00000641597 CACNA1HO95180 2353 aa14.31□□□□□ -0.12
PHGDH-223ENST00000641597 SIRPB1O00241 398 aa14.31□□□□□ -0.12
PHGDH-223ENST00000641597 CEBPDP49716 269 aaPredicted RBP14.31□□□□□ -0.12
PHGDH-223ENST00000641597 TMEM267Q0VDI3 215 aaPredicted RBP14.31□□□□□ -0.12
PHGDH-223ENST00000641597 MDP1Q86V88 176 aa14.31□□□□□ -0.12
PHGDH-223ENST00000641597 HIST1H2AAQ96QV6 131 aa14.31□□□□□ -0.12
PHGDH-223ENST00000641597 LYRM2Q9NU23 88 aaPredicted RBP14.31□□□□□ -0.12
PHGDH-223ENST00000641597 COA4Q9NYJ1 87 aa14.31□□□□□ -0.12
PHGDH-223ENST00000641597 MAP1BP46821 2468 aaKnown RBP14.31□□□□□ -0.12
PHGDH-223ENST00000641597 OR2B8PP59922 312 aa14.3□□□□□ -0.12
PHGDH-223ENST00000641597 VAMP2P63027 116 aa14.3□□□□□ -0.12
PHGDH-223ENST00000641597 SPSB3Q6PJ21 355 aa14.3□□□□□ -0.12
PHGDH-223ENST00000641597 SFT2D1Q8WV19 159 aa14.3□□□□□ -0.12
PHGDH-223ENST00000641597 PPP1R3CQ9UQK1 317 aa14.3□□□□□ -0.12
PHGDH-223ENST00000641597 WRBO00258 174 aa14.3□□□□□ -0.12
PHGDH-223ENST00000641597 SLC34A2O95436 690 aa14.3□□□□□ -0.12
PHGDH-223ENST00000641597 UCP1P25874 307 aa14.3□□□□□ -0.12
PHGDH-223ENST00000641597 NRN1LQ496H8 165 aa14.3□□□□□ -0.12
PHGDH-223ENST00000641597 GCNT2Q8N0V5 402 aa14.3□□□□□ -0.12
PHGDH-223ENST00000641597 BIN3Q9NQY0 253 aa14.3□□□□□ -0.12
PHGDH-223ENST00000641597 DLL3Q9NYJ7 618 aa14.3□□□□□ -0.12
PHGDH-223ENST00000641597 HOXA1P49639 335 aaPredicted RBP14.29□□□□□ -0.12
PHGDH-223ENST00000641597 ZNF324BQ6AW86 544 aaPredicted RBP14.29□□□□□ -0.12
PHGDH-223ENST00000641597 MCEMP1Q8IX19 187 aa14.29□□□□□ -0.12
PHGDH-223ENST00000641597 FAM58AQ8N1B3 248 aa14.29□□□□□ -0.12
PHGDH-223ENST00000641597 OR5A2Q8NGI9 324 aa14.29□□□□□ -0.12
PHGDH-223ENST00000641597 PLEKHF2Q9H8W4 249 aa14.29□□□□□ -0.12
PHGDH-223ENST00000641597 RP1L1Q8IWN7 2480 aaPredicted RBP14.29□□□□□ -0.12
PHGDH-223ENST00000641597 CHD3Q12873 2000 aaKnown RBP14.29□□□□□ -0.12
PHGDH-223ENST00000641597 ANKRD30BLA7E2S9 258 aa14.29□□□□□ -0.12
PHGDH-223ENST00000641597 ZNF727A8MUV8 499 aa14.29□□□□□ -0.12
PHGDH-223ENST00000641597 IGLV2-14P01704 120 aa14.29□□□□□ -0.12
PHGDH-223ENST00000641597 ZNF16P17020 682 aaPredicted RBP14.29□□□□□ -0.12
PHGDH-223ENST00000641597 VDAC1P21796 283 aa14.29□□□□□ -0.12
PHGDH-223ENST00000641597 ID3Q02535 119 aa14.29□□□□□ -0.12
PHGDH-223ENST00000641597 PLP2Q04941 152 aa14.29□□□□□ -0.12
PHGDH-223ENST00000641597 CLN3Q13286 438 aa14.29□□□□□ -0.12
PHGDH-223ENST00000641597 DBX2Q6ZNG2 339 aa14.29□□□□□ -0.12
PHGDH-223ENST00000641597 GPR146Q96CH1 333 aa14.29□□□□□ -0.12
PHGDH-223ENST00000641597 KCNJ16Q9NPI9 418 aa14.29□□□□□ -0.12
PHGDH-223ENST00000641597 RNF115Q9Y4L5 304 aa14.29□□□□□ -0.12
PHGDH-223ENST00000641597 IGKV1-39P01597 117 aa14.29□□□□□ -0.12
PHGDH-223ENST00000641597 IGKV1D-39P04432 117 aa14.29□□□□□ -0.12
PHGDH-223ENST00000641597 F2RP25116 425 aa14.29□□□□□ -0.12
PHGDH-223ENST00000641597 SULT1A1P50225 295 aa14.29□□□□□ -0.12
PHGDH-223ENST00000641597 MPV17LQ2QL34 196 aa14.29□□□□□ -0.12
PHGDH-223ENST00000641597 IL22RA1Q8N6P7 574 aa14.29□□□□□ -0.12
PHGDH-223ENST00000641597 SPRR3Q9UBC9 169 aa14.29□□□□□ -0.12
PHGDH-223ENST00000641597 DCHS1Q96JQ0 3298 aa14.28□□□□□ -0.12
PHGDH-223ENST00000641597 TXNL1O43396 289 aa14.28□□□□□ -0.12
PHGDH-223ENST00000641597 PITX3O75364 302 aa14.28□□□□□ -0.12
PHGDH-223ENST00000641597 IAPPP10997 89 aa14.28□□□□□ -0.12
PHGDH-223ENST00000641597 ADAM5Q6NVV9 412 aa14.28□□□□□ -0.12
PHGDH-223ENST00000641597 Q6ZS49 121 aa14.28□□□□□ -0.12
PHGDH-223ENST00000641597 CXorf67Q86X51 503 aaPredicted RBP14.28□□□□□ -0.12
PHGDH-223ENST00000641597 OR1K1Q8NGR3 316 aa14.28□□□□□ -0.12
PHGDH-223ENST00000641597 OR10J5Q8NHC4 309 aa14.28□□□□□ -0.12
PHGDH-223ENST00000641597 SLC35B3Q9H1N7 401 aa14.28□□□□□ -0.12
PHGDH-223ENST00000641597 KIR2DS1A0A191URI9 304 aa14.28□□□□□ -0.12
PHGDH-223ENST00000641597 FAM90A10PA6NDY2 464 aa14.28□□□□□ -0.12
PHGDH-223ENST00000641597 FAM90A18PA6NE21 464 aa14.28□□□□□ -0.12
PHGDH-223ENST00000641597 FAM90A16PA6NEW6 464 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms