RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 MRPS24Q96EL2 167 aaKnown RBP8.16□□□□□ -1.1
PHGDH-222ENST00000641587 Q96M66 194 aa8.16□□□□□ -1.1
PHGDH-222ENST00000641587 CMTM3Q96MX0 182 aa8.16□□□□□ -1.1
PHGDH-222ENST00000641587 LPAR5Q9H1C0 372 aa8.16□□□□□ -1.1
PHGDH-222ENST00000641587 ABCG5Q9H222 651 aa8.16□□□□□ -1.1
PHGDH-222ENST00000641587 RHOFQ9HBH0 211 aa8.16□□□□□ -1.1
PHGDH-222ENST00000641587 HMG20AQ9NP66 347 aa8.16□□□□□ -1.1
PHGDH-222ENST00000641587 IL36RNQ9UBH0 155 aa8.16□□□□□ -1.1
PHGDH-222ENST00000641587 OR14J1Q9UGF5 321 aa8.16□□□□□ -1.1
PHGDH-222ENST00000641587 MRPS7Q9Y2R9 242 aaKnown RBP8.16□□□□□ -1.1
PHGDH-222ENST00000641587 TRAV18A0A075B6X5 111 aa8.15□□□□□ -1.1
PHGDH-222ENST00000641587 MEIOCA2RUB1 952 aa8.15□□□□□ -1.1
PHGDH-222ENST00000641587 FABP12A6NFH5 140 aa8.15□□□□□ -1.1
PHGDH-222ENST00000641587 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.15□□□□□ -1.1
PHGDH-222ENST00000641587 GEMIN2O14893 280 aaKnown RBP8.15□□□□□ -1.1
PHGDH-222ENST00000641587 GPR37O15354 613 aa8.15□□□□□ -1.1
PHGDH-222ENST00000641587 NDUFA2O43678 99 aa8.15□□□□□ -1.1
PHGDH-222ENST00000641587 SCGNO76038 276 aa8.15□□□□□ -1.1
PHGDH-222ENST00000641587 OR7C1O76099 320 aaPredicted RBP8.15□□□□□ -1.1
PHGDH-222ENST00000641587 DUSP1P28562 367 aa8.15□□□□□ -1.1
PHGDH-222ENST00000641587 ERVK11-1P61568 191 aa8.15□□□□□ -1.1
PHGDH-222ENST00000641587 LSAMPQ13449 338 aa8.15□□□□□ -1.1
PHGDH-222ENST00000641587 LY6EQ16553 131 aa8.15□□□□□ -1.1
PHGDH-222ENST00000641587 ATAD3CQ5T2N8 411 aa8.15□□□□□ -1.1
PHGDH-222ENST00000641587 ELP2Q6IA86 826 aa8.15□□□□□ -1.1
PHGDH-222ENST00000641587 RAB12Q6IQ22 244 aa8.15□□□□□ -1.1
PHGDH-222ENST00000641587 BAIAP2L2Q6UXY1 529 aa8.15□□□□□ -1.1
PHGDH-222ENST00000641587 ACP7Q6ZNF0 438 aa8.15□□□□□ -1.1
PHGDH-222ENST00000641587 KLHDC1Q8N7A1 406 aa8.15□□□□□ -1.1
PHGDH-222ENST00000641587 S100ZQ8WXG8 99 aa8.15□□□□□ -1.1
PHGDH-222ENST00000641587 TNFRSF14Q92956 283 aa8.15□□□□□ -1.1
PHGDH-222ENST00000641587 NEDD4LQ96PU5 975 aa8.15□□□□□ -1.1
PHGDH-222ENST00000641587 WDR13Q9H1Z4 485 aa8.15□□□□□ -1.1
PHGDH-222ENST00000641587 AURKAIP1Q9NWT8 199 aaPredicted RBP8.15□□□□□ -1.1
PHGDH-222ENST00000641587 RASL12Q9NYN1 266 aa8.15□□□□□ -1.1
PHGDH-222ENST00000641587 KAAG1Q9UBP8 84 aa8.15□□□□□ -1.1
PHGDH-222ENST00000641587 GLS2Q9UI32 602 aa8.15□□□□□ -1.1
PHGDH-222ENST00000641587 A0A0A6YYD4 124 aa8.14□□□□□ -1.11
PHGDH-222ENST00000641587 H3BUX3 64 aa8.14□□□□□ -1.11
PHGDH-222ENST00000641587 SIRPB1O00241 398 aa8.14□□□□□ -1.11
PHGDH-222ENST00000641587 SH2D1BO14796 132 aa8.14□□□□□ -1.11
PHGDH-222ENST00000641587 SOCS1O15524 211 aa8.14□□□□□ -1.11
PHGDH-222ENST00000641587 NOS1APO75052 506 aaPredicted RBP8.14□□□□□ -1.11
PHGDH-222ENST00000641587 ECDO95905 644 aaPredicted RBP8.14□□□□□ -1.11
PHGDH-222ENST00000641587 HAND1O96004 215 aa8.14□□□□□ -1.11
PHGDH-222ENST00000641587 ACAA1P09110 424 aaPredicted RBP8.14□□□□□ -1.11
PHGDH-222ENST00000641587 ZNF44P15621 663 aa8.14□□□□□ -1.11
PHGDH-222ENST00000641587 BLVRBP30043 206 aaPredicted RBP8.14□□□□□ -1.11
PHGDH-222ENST00000641587 MNDAP41218 407 aa8.14□□□□□ -1.11
PHGDH-222ENST00000641587 GABRA2P47869 451 aa8.14□□□□□ -1.11
PHGDH-222ENST00000641587 CEBPDP49716 269 aaPredicted RBP8.14□□□□□ -1.11
PHGDH-222ENST00000641587 TAS2R20P59543 309 aa8.14□□□□□ -1.11
PHGDH-222ENST00000641587 IL13RA2Q14627 380 aa8.14□□□□□ -1.11
PHGDH-222ENST00000641587 ZNF846Q147U1 533 aa8.14□□□□□ -1.11
PHGDH-222ENST00000641587 NSUN5P1Q3KNT7 163 aa8.14□□□□□ -1.11
PHGDH-222ENST00000641587 MOGAT2Q3SYC2 334 aa8.14□□□□□ -1.11
PHGDH-222ENST00000641587 PYDC2Q56P42 97 aa8.14□□□□□ -1.11
PHGDH-222ENST00000641587 RNASE12Q5GAN4 147 aaKnown RBP8.14□□□□□ -1.11
PHGDH-222ENST00000641587 SPIN3Q5JUX0 258 aa8.14□□□□□ -1.11
PHGDH-222ENST00000641587 LINC00596Q86U02 117 aa8.14□□□□□ -1.11
PHGDH-222ENST00000641587 CCDC190Q86UF4 302 aa8.14□□□□□ -1.11
PHGDH-222ENST00000641587 SNX29P2Q8IUI4 249 aa8.14□□□□□ -1.11
PHGDH-222ENST00000641587 OR5T2Q8NGG2 359 aa8.14□□□□□ -1.11
PHGDH-222ENST00000641587 OR10R2Q8NGX6 335 aa8.14□□□□□ -1.11
PHGDH-222ENST00000641587 NEK7Q8TDX7 302 aa8.14□□□□□ -1.11
PHGDH-222ENST00000641587 CFHR4Q92496 578 aa8.14□□□□□ -1.11
PHGDH-222ENST00000641587 H1FXQ92522 213 aaKnown RBP8.14□□□□□ -1.11
PHGDH-222ENST00000641587 RAB3CQ96E17 227 aa8.14□□□□□ -1.11
PHGDH-222ENST00000641587 TM2D1Q9BX74 207 aa8.14□□□□□ -1.11
PHGDH-222ENST00000641587 WDR12Q9GZL7 423 aaKnown RBP8.14□□□□□ -1.11
PHGDH-222ENST00000641587 AKIP1Q9NQ31 210 aa8.14□□□□□ -1.11
PHGDH-222ENST00000641587 NLKQ9UBE8 527 aa8.14□□□□□ -1.11
PHGDH-222ENST00000641587 A0A0A6YYH2 397 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 FAM90A10PA6NDY2 464 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 FAM90A18PA6NE21 464 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 FAM90A16PA6NEW6 464 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 FAM90A20PA6NIJ5 464 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 NKX6-3A6NJ46 265 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 A6NJ64 397 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 FAM90A8PA6NJQ4 464 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 FAM90A7PA6NKC0 464 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 FAM90A22PA8MWA6 464 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 FAM90A12PA8MX19 464 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 FAM90A5PA8MXJ8 464 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 FAM90A23PA8MXZ1 464 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 HSPB6O14558 160 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 DEGS1O15121 323 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 XRCC3O43542 346 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 PDCD6O75340 191 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 CHRM2P08172 466 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 FAM90A15PP0C7V4 464 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 FAM90A13PP0C7W8 464 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 FAM90A14PP0C7W9 464 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 FAM90A24PP0C7X0 464 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 VSIG10L2P0DP72 767 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 LOXL3P58215 753 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 PITPNAQ00169 270 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 ZNF45Q02386 682 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 GUCA2AQ02747 115 aa8.13□□□□□ -1.11
PHGDH-222ENST00000641587 HABP2Q14520 560 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms