RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 ZNF429Q86V71 674 aa12.5□□□□□ -0.41
SCARB2-221ENST00000640341 COMMD1Q8N668 190 aa12.5□□□□□ -0.41
SCARB2-221ENST00000640341 CLDN23Q96B33 292 aa12.5□□□□□ -0.41
SCARB2-221ENST00000640341 SIGLEC12Q96PQ1 595 aa12.5□□□□□ -0.41
SCARB2-221ENST00000640341 LYRM2Q9NU23 88 aaPredicted RBP12.5□□□□□ -0.41
SCARB2-221ENST00000640341 WSB1Q9Y6I7 421 aa12.5□□□□□ -0.41
SCARB2-221ENST00000640341 RIF1Q5UIP0 2472 aaKnown RBP12.49□□□□□ -0.41
SCARB2-221ENST00000640341 NCKAP5O14513 1909 aa12.49□□□□□ -0.41
SCARB2-221ENST00000640341 DLK1P80370 383 aa12.49□□□□□ -0.41
SCARB2-221ENST00000640341 ASCL4Q6XD76 172 aa12.49□□□□□ -0.41
SCARB2-221ENST00000640341 ZMAT5Q9UDW3 170 aaKnown RBP12.49□□□□□ -0.41
SCARB2-221ENST00000640341 SIRPB1O00241 398 aa12.49□□□□□ -0.41
SCARB2-221ENST00000640341 CLN5O75503 358 aa12.49□□□□□ -0.41
SCARB2-221ENST00000640341 RHBDL1O75783 438 aa12.49□□□□□ -0.41
SCARB2-221ENST00000640341 OR8U8P0C7N1 319 aa12.49□□□□□ -0.41
SCARB2-221ENST00000640341 AGAP20933 346 aa12.49□□□□□ -0.41
SCARB2-221ENST00000640341 PLGLB1Q02325 96 aa12.49□□□□□ -0.41
SCARB2-221ENST00000640341 OR10J5Q8NHC4 309 aa12.49□□□□□ -0.41
SCARB2-221ENST00000640341 CT55Q8WUE5 264 aa12.49□□□□□ -0.41
SCARB2-221ENST00000640341 OR1A1Q9P1Q5 309 aa12.49□□□□□ -0.41
SCARB2-221ENST00000640341 MDKP21741 143 aaPredicted RBP12.49□□□□□ -0.41
SCARB2-221ENST00000640341 VDAC1P21796 283 aa12.49□□□□□ -0.41
SCARB2-221ENST00000640341 ELLP55199 621 aaPredicted RBP12.49□□□□□ -0.41
SCARB2-221ENST00000640341 UCP3P55916 312 aa12.49□□□□□ -0.41
SCARB2-221ENST00000640341 HIKESHIQ53FT3 197 aa12.49□□□□□ -0.41
SCARB2-221ENST00000640341 Q6ZSR3 168 aa12.49□□□□□ -0.41
SCARB2-221ENST00000640341 STX12Q86Y82 276 aa12.49□□□□□ -0.41
SCARB2-221ENST00000640341 MCEMP1Q8IX19 187 aa12.49□□□□□ -0.41
SCARB2-221ENST00000640341 TCTEX1D2Q8WW35 142 aa12.49□□□□□ -0.41
SCARB2-221ENST00000640341 CFAP47Q6ZTR5 3102 aa12.48□□□□□ -0.41
SCARB2-221ENST00000640341 ARHGAP21Q5T5U3 1957 aa12.48□□□□□ -0.41
SCARB2-221ENST00000640341 SRPXP78539 464 aa12.48□□□□□ -0.41
SCARB2-221ENST00000640341 HOXA4Q00056 320 aaPredicted RBP12.48□□□□□ -0.41
SCARB2-221ENST00000640341 RHEBQ15382 184 aa12.48□□□□□ -0.41
SCARB2-221ENST00000640341 GSN-AS1Q9NRJ2 163 aa12.48□□□□□ -0.41
SCARB2-221ENST00000640341 MED13Q9UHV7 2174 aa12.48□□□□□ -0.41
SCARB2-221ENST00000640341 DOCK11Q5JSL3 2073 aa12.48□□□□□ -0.41
SCARB2-221ENST00000640341 PGLYRP1O75594 196 aaPredicted RBP12.48□□□□□ -0.41
SCARB2-221ENST00000640341 IFNA17P01571 189 aa12.48□□□□□ -0.41
SCARB2-221ENST00000640341 FGF12P61328 243 aa12.48□□□□□ -0.41
SCARB2-221ENST00000640341 LFNGQ8NES3 379 aa12.48□□□□□ -0.41
SCARB2-221ENST00000640341 ADGRG7Q96K78 797 aa12.48□□□□□ -0.41
SCARB2-221ENST00000640341 C1QTNF5Q9BXJ0 243 aa12.48□□□□□ -0.41
SCARB2-221ENST00000640341 LOXL2Q9Y4K0 774 aa12.48□□□□□ -0.41
SCARB2-221ENST00000640341 TGIF2-C20orf24A0A0A6YYL0 155 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 CYB5BO43169 146 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 PITX3O75364 302 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 TUSC2O75896 110 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 ABLIM2Q6H8Q1 611 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 SPSB3Q6PJ21 355 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 NIPSNAP3BQ9BS92 247 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 CACNG5Q9UF02 275 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 ZNF391Q9UJN7 358 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 CD300LBA8K4G0 201 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 AP4M1O00189 453 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 UBE2CO00762 179 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 SYNGR4O95473 234 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 IFNA5P01569 189 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 FOLR2P14207 255 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 PLP2Q04941 152 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 RNF150Q9ULK6 438 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 ICE1Q9Y2F5 2266 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 KIR2DS1A0A191URI9 304 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 CYTIPO60759 359 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 S100A8P05109 93 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 S100GP29377 79 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 KIR2DS4P43632 304 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 ZXDAP98168 799 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 KIR2DS1Q14954 304 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 CLEC12BQ2HXU8 276 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 RNF212Q495C1 297 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 SPANXN5Q5MJ07 72 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 RIPPLY2Q5TAB7 128 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 ABHD17BQ5VST6 288 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 REPIN1Q9BWE0 567 aaKnown RBP12.47□□□□□ -0.41
SCARB2-221ENST00000640341 VSIRQ9H7M9 311 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 IL36GQ9NZH8 169 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 OR14J1Q9UGF5 321 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 BOKQ9UMX3 212 aaPredicted RBP12.47□□□□□ -0.41
SCARB2-221ENST00000640341 GTF3C1Q12789 2109 aa12.47□□□□□ -0.41
SCARB2-221ENST00000640341 GVINP1Q7Z2Y8 2422 aa12.46□□□□□ -0.41
SCARB2-221ENST00000640341 ANKRD30BLA7E2S9 258 aa12.46□□□□□ -0.41
SCARB2-221ENST00000640341 ZFP36L1Q07352 338 aaKnown RBP12.46□□□□□ -0.41
SCARB2-221ENST00000640341 CEACAM21Q3KPI0 293 aa12.46□□□□□ -0.41
SCARB2-221ENST00000640341 OR8G2PQ6IF36 304 aa12.46□□□□□ -0.41
SCARB2-221ENST00000640341 LILRB2Q8N423 598 aa12.46□□□□□ -0.41
SCARB2-221ENST00000640341 APH1AQ96BI3 265 aa12.46□□□□□ -0.41
SCARB2-221ENST00000640341 GPR146Q96CH1 333 aa12.46□□□□□ -0.41
SCARB2-221ENST00000640341 EGLN1Q9GZT9 426 aa12.46□□□□□ -0.41
SCARB2-221ENST00000640341 PLK3Q9H4B4 646 aa12.46□□□□□ -0.41
SCARB2-221ENST00000640341 ZNF665Q9H7R5 613 aa12.46□□□□□ -0.41
SCARB2-221ENST00000640341 CEP250Q9BV73 2442 aa12.46□□□□□ -0.41
SCARB2-221ENST00000640341 CXCL1P09341 107 aa12.46□□□□□ -0.41
SCARB2-221ENST00000640341 DUSP3P51452 185 aaPredicted RBP12.46□□□□□ -0.41
SCARB2-221ENST00000640341 Q6ZRM9 215 aa12.46□□□□□ -0.41
SCARB2-221ENST00000640341 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.46□□□□□ -0.41
SCARB2-221ENST00000640341 SCGB1C1Q8TD33 95 aa12.46□□□□□ -0.41
SCARB2-221ENST00000640341 TRAPPC2LQ9UL33 140 aa12.46□□□□□ -0.41
SCARB2-221ENST00000640341 CUL9Q8IWT3 2517 aa12.46□□□□□ -0.42
SCARB2-221ENST00000640341 CNOT1A5YKK6 2376 aaKnown RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms