RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 C20orf204Q6ZNR8 217 aa12.8□□□□□ -0.36
TRIM3-215ENST00000639856 WDR86Q86TI4 376 aa12.8□□□□□ -0.36
TRIM3-215ENST00000639856 TBC1D26Q86UD7 250 aa12.8□□□□□ -0.36
TRIM3-215ENST00000639856 BOLLQ8N9W6 283 aaKnown RBP12.8□□□□□ -0.36
TRIM3-215ENST00000639856 BPIFCQ8NFQ6 507 aa12.8□□□□□ -0.36
TRIM3-215ENST00000639856 OR52M1Q8NGK5 317 aa12.8□□□□□ -0.36
TRIM3-215ENST00000639856 OR1J1Q8NGS3 322 aa12.8□□□□□ -0.36
TRIM3-215ENST00000639856 FBXL17Q9UF56 701 aa12.8□□□□□ -0.36
TRIM3-215ENST00000639856 SH3BGRL2Q9UJC5 107 aa12.8□□□□□ -0.36
TRIM3-215ENST00000639856 CADP27708 2225 aa12.79□□□□□ -0.36
TRIM3-215ENST00000639856 C3orf80F5H4A9 247 aa12.79□□□□□ -0.36
TRIM3-215ENST00000639856 GPR31O00270 319 aa12.79□□□□□ -0.36
TRIM3-215ENST00000639856 JTBO76095 146 aa12.79□□□□□ -0.36
TRIM3-215ENST00000639856 GAPDHP04406 335 aaKnown RBP12.79□□□□□ -0.36
TRIM3-215ENST00000639856 RAC2P15153 192 aa12.79□□□□□ -0.36
TRIM3-215ENST00000639856 TMEM33P57088 247 aa12.79□□□□□ -0.36
TRIM3-215ENST00000639856 SPIN3Q5JUX0 258 aa12.79□□□□□ -0.36
TRIM3-215ENST00000639856 TMEM268Q5VZI3 342 aa12.79□□□□□ -0.36
TRIM3-215ENST00000639856 ALKBH2Q6NS38 261 aa12.79□□□□□ -0.36
TRIM3-215ENST00000639856 ZNF880Q6PDB4 577 aa12.79□□□□□ -0.36
TRIM3-215ENST00000639856 GFRALQ6UXV0 394 aa12.79□□□□□ -0.36
TRIM3-215ENST00000639856 MEX3BQ6ZN04 569 aaKnown RBP12.79□□□□□ -0.36
TRIM3-215ENST00000639856 ZNF818PQ6ZRF7 136 aa12.79□□□□□ -0.36
TRIM3-215ENST00000639856 MS4A7Q9GZW8 240 aaPredicted RBP12.79□□□□□ -0.36
TRIM3-215ENST00000639856 LPAR3Q9UBY5 353 aa12.79□□□□□ -0.36
TRIM3-215ENST00000639856 IGKV1D-13A0A0B4J2D9 117 aa12.79□□□□□ -0.36
TRIM3-215ENST00000639856 IGLV1-44P01699 117 aa12.79□□□□□ -0.36
TRIM3-215ENST00000639856 APOC3P02656 99 aa12.79□□□□□ -0.36
TRIM3-215ENST00000639856 IGKV1-13P0DP09 117 aa12.79□□□□□ -0.36
TRIM3-215ENST00000639856 MPV17P39210 176 aa12.79□□□□□ -0.36
TRIM3-215ENST00000639856 EIF2S3LQ2VIR3 472 aaKnown RBP12.79□□□□□ -0.36
TRIM3-215ENST00000639856 PCSK4Q6UW60 755 aa12.79□□□□□ -0.36
TRIM3-215ENST00000639856 Q8IYB0 196 aa12.79□□□□□ -0.36
TRIM3-215ENST00000639856 GAPTQ8N292 157 aa12.79□□□□□ -0.36
TRIM3-215ENST00000639856 SCCPDHQ8NBX0 429 aa12.79□□□□□ -0.36
TRIM3-215ENST00000639856 ARL11Q969Q4 196 aa12.79□□□□□ -0.36
TRIM3-215ENST00000639856 S100PBPQ96BU1 408 aa12.79□□□□□ -0.36
TRIM3-215ENST00000639856 POLDIP2Q9Y2S7 368 aa12.79□□□□□ -0.36
TRIM3-215ENST00000639856 SLC25A15Q9Y619 301 aa12.79□□□□□ -0.36
TRIM3-215ENST00000639856 IGHV1-18A0A0C4DH31 117 aa12.78□□□□□ -0.36
TRIM3-215ENST00000639856 ZNF705EA8MWA4 302 aaPredicted RBP12.78□□□□□ -0.36
TRIM3-215ENST00000639856 NUDT19A8MXV4 375 aa12.78□□□□□ -0.36
TRIM3-215ENST00000639856 IQCF6A8MYZ5 107 aa12.78□□□□□ -0.36
TRIM3-215ENST00000639856 PRRG2O14669 202 aa12.78□□□□□ -0.36
TRIM3-215ENST00000639856 DEGS1O15121 323 aa12.78□□□□□ -0.36
TRIM3-215ENST00000639856 ST8SIA3O43173 380 aa12.78□□□□□ -0.36
TRIM3-215ENST00000639856 ZNF44P15621 663 aa12.78□□□□□ -0.36
TRIM3-215ENST00000639856 RCC1P18754 421 aaPredicted RBP12.78□□□□□ -0.36
TRIM3-215ENST00000639856 BMP5P22003 454 aa12.78□□□□□ -0.36
TRIM3-215ENST00000639856 BTN1A1Q13410 526 aa12.78□□□□□ -0.36
TRIM3-215ENST00000639856 Q6P435 159 aa12.78□□□□□ -0.36
TRIM3-215ENST00000639856 OR4D5Q8NGN0 318 aa12.78□□□□□ -0.36
TRIM3-215ENST00000639856 OR4A4PQ8NGN8 299 aa12.78□□□□□ -0.36
TRIM3-215ENST00000639856 SAT2Q96F10 170 aaPredicted RBP12.78□□□□□ -0.36
TRIM3-215ENST00000639856 TMEM56Q96MV1 263 aa12.78□□□□□ -0.36
TRIM3-215ENST00000639856 USB1Q9BQ65 265 aaKnown RBP12.78□□□□□ -0.36
TRIM3-215ENST00000639856 ADAT1Q9BUB4 502 aaKnown RBP12.78□□□□□ -0.36
TRIM3-215ENST00000639856 SFXN3Q9BWM7 321 aa12.78□□□□□ -0.36
TRIM3-215ENST00000639856 UBE2J1Q9Y385 318 aaPredicted RBP12.78□□□□□ -0.36
TRIM3-215ENST00000639856 TMEM56-RWDD3S4R434 201 aa12.78□□□□□ -0.36
TRIM3-215ENST00000639856 CDS2O95674 445 aa12.77□□□□□ -0.36
TRIM3-215ENST00000639856 UCNP55089 124 aa12.77□□□□□ -0.36
TRIM3-215ENST00000639856 ERVK11-1P61568 191 aa12.77□□□□□ -0.36
TRIM3-215ENST00000639856 HLA-DRB3P79483 266 aa12.77□□□□□ -0.36
TRIM3-215ENST00000639856 PSG7Q13046 419 aa12.77□□□□□ -0.36
TRIM3-215ENST00000639856 KLF14Q8TD94 323 aaPredicted RBP12.77□□□□□ -0.36
TRIM3-215ENST00000639856 NARS2Q96I59 477 aaKnown RBP12.77□□□□□ -0.36
TRIM3-215ENST00000639856 FZR1Q9UM11 496 aa12.77□□□□□ -0.36
TRIM3-215ENST00000639856 IGHV2OR16-5A0A0B4J2B6 119 aa12.77□□□□□ -0.37
TRIM3-215ENST00000639856 P2RY1P47900 373 aa12.77□□□□□ -0.37
TRIM3-215ENST00000639856 ZNF154Q13106 437 aa12.77□□□□□ -0.37
TRIM3-215ENST00000639856 GPR157Q5UAW9 335 aa12.77□□□□□ -0.37
TRIM3-215ENST00000639856 ZNF695Q8IW36 515 aa12.77□□□□□ -0.37
TRIM3-215ENST00000639856 UBAC2Q8NBM4 344 aa12.77□□□□□ -0.37
TRIM3-215ENST00000639856 ERGIC1Q969X5 290 aa12.77□□□□□ -0.37
TRIM3-215ENST00000639856 SMIM8Q96KF7 97 aa12.77□□□□□ -0.37
TRIM3-215ENST00000639856 OBP2BQ9NPH6 170 aa12.77□□□□□ -0.37
TRIM3-215ENST00000639856 MMP26Q9NRE1 261 aa12.77□□□□□ -0.37
TRIM3-215ENST00000639856 CCL28Q9NRJ3 127 aa12.77□□□□□ -0.37
TRIM3-215ENST00000639856 TREM2Q9NZC2 230 aa12.77□□□□□ -0.37
TRIM3-215ENST00000639856 A0A0G2JNJ9 132 aa12.76□□□□□ -0.37
TRIM3-215ENST00000639856 IGHV3-64DA0A0J9YX35 117 aa12.76□□□□□ -0.37
TRIM3-215ENST00000639856 C1QTNF9BB2RNN3 333 aa12.76□□□□□ -0.37
TRIM3-215ENST00000639856 C1QTNF9P0C862 333 aa12.76□□□□□ -0.37
TRIM3-215ENST00000639856 SELEP16581 610 aa12.76□□□□□ -0.37
TRIM3-215ENST00000639856 MDH2P40926 338 aaKnown RBP12.76□□□□□ -0.37
TRIM3-215ENST00000639856 SULT1A2P50226 295 aa12.76□□□□□ -0.37
TRIM3-215ENST00000639856 ZNF83P51522 516 aa12.76□□□□□ -0.37
TRIM3-215ENST00000639856 MST1LQ2TV78 715 aa12.76□□□□□ -0.37
TRIM3-215ENST00000639856 CMTM1Q8IZ96 169 aa12.76□□□□□ -0.37
TRIM3-215ENST00000639856 OR10J5Q8NHC4 309 aa12.76□□□□□ -0.37
TRIM3-215ENST00000639856 CABLES2Q9BTV7 478 aa12.76□□□□□ -0.37
TRIM3-215ENST00000639856 SMIM3Q9BZL3 60 aa12.76□□□□□ -0.37
TRIM3-215ENST00000639856 Q9UFV3 132 aa12.76□□□□□ -0.37
TRIM3-215ENST00000639856 POMT1Q9Y6A1 747 aa12.76□□□□□ -0.37
TRIM3-215ENST00000639856 NKX2-6A6NCS4 301 aa12.76□□□□□ -0.37
TRIM3-215ENST00000639856 HSD17B6O14756 317 aa12.76□□□□□ -0.37
TRIM3-215ENST00000639856 GPR137BO60478 399 aa12.76□□□□□ -0.37
TRIM3-215ENST00000639856 PGA5P0DJD9 388 aa12.76□□□□□ -0.37
TRIM3-215ENST00000639856 UCP1P25874 307 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms