RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.6□□□□□ -0.87
KCNMA1-259ENST00000639406 KCNMB2Q9Y691 235 aa9.6□□□□□ -0.87
KCNMA1-259ENST00000639406 A8MWL6 223 aa9.6□□□□□ -0.87
KCNMA1-259ENST00000639406 MAS1LP35410 378 aa9.6□□□□□ -0.87
KCNMA1-259ENST00000639406 PMELP40967 661 aa9.6□□□□□ -0.87
KCNMA1-259ENST00000639406 FMODQ06828 376 aa9.6□□□□□ -0.87
KCNMA1-259ENST00000639406 BIVMQ86UB2 503 aa9.6□□□□□ -0.87
KCNMA1-259ENST00000639406 APCDD1LQ8NCL9 501 aa9.6□□□□□ -0.87
KCNMA1-259ENST00000639406 ZNF707Q96C28 371 aaPredicted RBP9.6□□□□□ -0.87
KCNMA1-259ENST00000639406 MRGPRX4Q96LA9 322 aa9.6□□□□□ -0.87
KCNMA1-259ENST00000639406 GPR27Q9NS67 375 aa9.6□□□□□ -0.87
KCNMA1-259ENST00000639406 MMP17Q9ULZ9 603 aa9.6□□□□□ -0.87
KCNMA1-259ENST00000639406 HLA-DQB1P01920 261 aa9.6□□□□□ -0.87
KCNMA1-259ENST00000639406 SMIM21Q3B7S5 101 aa9.6□□□□□ -0.87
KCNMA1-259ENST00000639406 TMEM95Q3KNT9 176 aa9.6□□□□□ -0.87
KCNMA1-259ENST00000639406 CITED2Q99967 270 aaPredicted RBP9.6□□□□□ -0.87
KCNMA1-259ENST00000639406 COA4Q9NYJ1 87 aa9.6□□□□□ -0.87
KCNMA1-259ENST00000639406 A0A1W2PRS3 328 aa9.6□□□□□ -0.87
KCNMA1-259ENST00000639406 SCRG1O75711 98 aa9.6□□□□□ -0.87
KCNMA1-259ENST00000639406 GALNSP34059 522 aa9.6□□□□□ -0.87
KCNMA1-259ENST00000639406 DCAF12Q5T6F0 453 aa9.6□□□□□ -0.87
KCNMA1-259ENST00000639406 DEFB108BQ8NET1 73 aa9.6□□□□□ -0.87
KCNMA1-259ENST00000639406 VN1R2Q8NFZ6 395 aa9.6□□□□□ -0.87
KCNMA1-259ENST00000639406 ZPBPQ9BS86 351 aa9.6□□□□□ -0.87
KCNMA1-259ENST00000639406 TMSB15BA0A087X1C1 80 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 RBFOX2O43251 390 aaKnown RBP eCLIP9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 CD46P15529 392 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 ZFAND6Q6FIF0 208 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 OR2V1Q8NHB1 315 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 C2orf88Q9BSF0 95 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 QTRT1Q9BXR0 403 aaKnown RBP9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 SH3BGRL3Q9H299 93 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 IGLV3-10A0A075B6K4 115 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 IGHV3-15A0A0B4J1V0 119 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 MS4A18H0YCH9 400 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 LGALS3P17931 250 aaKnown RBP9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 UCNP55089 124 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 MS4A18Q3C1V0 323 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 KCNS1Q96KK3 526 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 FER1L6-AS2Q96M78 137 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 ANKRD10Q9NXR5 420 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 CYSLTR1Q9Y271 337 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 BAZ2AQ9UIF9 1905 aaKnown RBP9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 MKRN2OSH3BPM6 223 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 DHHO43323 396 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 FAM157BP0CG42 384 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 B4GALT1P15291 398 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 KCNE4Q8WWG9 221 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 SNRNP40Q96DI7 357 aaKnown RBP9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 WDR34Q96EX3 536 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 WDYHV1Q96HA8 205 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 MMP25Q9NPA2 562 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 CCL28Q9NRJ3 127 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 HILPDAQ9Y5L2 63 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 TRGV10A0A0A0MS01 117 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 PPYP01298 95 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 LINC00869P0C866 280 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 ACP1P24666 158 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 WNT5AP41221 380 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 MRPS21P82921 87 aaKnown RBP9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 OR1F12Q8NHA8 337 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 C16orf52Q8NHV5 167 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 APOBEC3DQ96AK3 386 aaPredicted RBP9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 TMEM45BQ96B21 275 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 CNRIP1Q96F85 164 aaPredicted RBP9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 SMOC1Q9H4F8 434 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 WNT16Q9UBV4 365 aa9.59□□□□□ -0.87
KCNMA1-259ENST00000639406 GPR183P32249 361 aa9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 DCDP81605 110 aaKnown RBP9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 FXYD3Q14802 87 aa9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 ZNF766Q5HY98 468 aa9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 THSD4Q6ZMP0 1018 aa9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 PRNTQ86SH4 94 aa9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 Q8IYB0 196 aa9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 BEND2Q8NDZ0 799 aa9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 KLHDC9Q8NEP7 349 aa9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 TXNDC17Q9BRA2 123 aa9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 C4AP0C0L4 1744 aa9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 C4BP0C0L5 1744 aa9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 A0A0A6YYD5 115 aa9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 GPX4P36969 197 aaPredicted RBP9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 TCTN1Q2MV58 587 aa9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 CLLU1OSQ5K130 101 aa9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 TPTE2P1Q5T6R2 138 aa9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 Q8WTZ3 238 aa9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 C11orf68Q9H3H3 251 aaKnown RBP9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 PCOLCE2Q9UKZ9 415 aa9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 ZNF257Q9Y2Q1 563 aa9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 IGHV3-20A0A0C4DH32 117 aa9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 CDC42EP2O14613 210 aa9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 CBLN1P23435 193 aa9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 METRNLQ641Q3 311 aa9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 TEPPQ6URK8 271 aa9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 PTX4Q96A99 478 aa9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 PGLYRP4Q96LB8 373 aa9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 SLC52A3Q9NQ40 469 aa9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 TMEM262E9PQX1 116 aa9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 TNFSF11O14788 317 aa9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 S1PR2O95136 353 aa9.58□□□□□ -0.88
KCNMA1-259ENST00000639406 RNASE1P07998 156 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms