RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 DNAH3Q8TD57 4116 aa15.94■□□□□ 0.14
CLN6-222ENST00000637667 A0A1W2PPE3 182 aa15.93■□□□□ 0.14
CLN6-222ENST00000637667 ZNF780AO75290 641 aaPredicted RBP15.93■□□□□ 0.14
CLN6-222ENST00000637667 MED21Q13503 144 aa15.93■□□□□ 0.14
CLN6-222ENST00000637667 SLC22A6Q4U2R8 563 aa15.93■□□□□ 0.14
CLN6-222ENST00000637667 ATAD3CQ5T2N8 411 aa15.93■□□□□ 0.14
CLN6-222ENST00000637667 TTC23Q5W5X9 447 aa15.93■□□□□ 0.14
CLN6-222ENST00000637667 TMEM80Q96HE8 168 aa15.93■□□□□ 0.14
CLN6-222ENST00000637667 CHCHD3Q9NX63 227 aaKnown RBP15.93■□□□□ 0.14
CLN6-222ENST00000637667 CKLFQ9UBR5 152 aa15.93■□□□□ 0.14
CLN6-222ENST00000637667 A0A1W2PP11 408 aa15.92■□□□□ 0.14
CLN6-222ENST00000637667 PSMB11A5LHX3 300 aa15.92■□□□□ 0.14
CLN6-222ENST00000637667 MAGEA13PA6NCF6 341 aa15.92■□□□□ 0.14
CLN6-222ENST00000637667 C15orf65H3BRN8 121 aa15.92■□□□□ 0.14
CLN6-222ENST00000637667 GPX5O75715 221 aa15.92■□□□□ 0.14
CLN6-222ENST00000637667 GTF2F2P13984 249 aa15.92■□□□□ 0.14
CLN6-222ENST00000637667 RPS11P62280 158 aaKnown RBP eCLIP15.92■□□□□ 0.14
CLN6-222ENST00000637667 HNF4GQ14541 408 aa15.92■□□□□ 0.14
CLN6-222ENST00000637667 LRRC36Q1X8D7 754 aa15.92■□□□□ 0.14
CLN6-222ENST00000637667 Q499Y3 187 aa15.92■□□□□ 0.14
CLN6-222ENST00000637667 YIF1BQ5BJH7 314 aa15.92■□□□□ 0.14
CLN6-222ENST00000637667 C5orf56Q8N8D9 126 aa15.92■□□□□ 0.14
CLN6-222ENST00000637667 ZFP41Q8N8Y5 198 aa15.92■□□□□ 0.14
CLN6-222ENST00000637667 ZNF485Q8NCK3 441 aa15.92■□□□□ 0.14
CLN6-222ENST00000637667 SETD9Q8NE22 299 aa15.92■□□□□ 0.14
CLN6-222ENST00000637667 ARL11Q969Q4 196 aa15.92■□□□□ 0.14
CLN6-222ENST00000637667 TRAV8-7A0A075B6U6 113 aa15.91■□□□□ 0.14
CLN6-222ENST00000637667 HSD17B6O14756 317 aa15.91■□□□□ 0.14
CLN6-222ENST00000637667 FGF16O43320 207 aa15.91■□□□□ 0.14
CLN6-222ENST00000637667 IGKV1D-33P01593 117 aa15.91■□□□□ 0.14
CLN6-222ENST00000637667 IGKV1-33P01594 117 aa15.91■□□□□ 0.14
CLN6-222ENST00000637667 SLC35A2P78381 396 aa15.91■□□□□ 0.14
CLN6-222ENST00000637667 ZNF816Q0VGE8 651 aaPredicted RBP15.91■□□□□ 0.14
CLN6-222ENST00000637667 ZNF329Q86UD4 541 aa15.91■□□□□ 0.14
CLN6-222ENST00000637667 OR52M1Q8NGK5 317 aa15.91■□□□□ 0.14
CLN6-222ENST00000637667 NEK7Q8TDX7 302 aa15.91■□□□□ 0.14
CLN6-222ENST00000637667 CCDC107Q8WV48 283 aa15.91■□□□□ 0.14
CLN6-222ENST00000637667 PGLYRP3Q96LB9 341 aa15.91■□□□□ 0.14
CLN6-222ENST00000637667 C8orf4Q9NR00 106 aa15.91■□□□□ 0.14
CLN6-222ENST00000637667 TRBV5-7A0A0A0MS05 114 aa15.9■□□□□ 0.14
CLN6-222ENST00000637667 CCRL2O00421 344 aa15.9■□□□□ 0.14
CLN6-222ENST00000637667 MT-ND4P03905 459 aa15.9■□□□□ 0.14
CLN6-222ENST00000637667 GAPDHP04406 335 aaKnown RBP15.9■□□□□ 0.14
CLN6-222ENST00000637667 FSTP19883 344 aa15.9■□□□□ 0.14
CLN6-222ENST00000637667 ADARB1P78563 741 aaKnown RBP15.9■□□□□ 0.14
CLN6-222ENST00000637667 GPR176Q14439 515 aa15.9■□□□□ 0.14
CLN6-222ENST00000637667 ZNF497Q6ZNH5 498 aa15.9■□□□□ 0.14
CLN6-222ENST00000637667 MOB3BQ86TA1 216 aa15.9■□□□□ 0.14
CLN6-222ENST00000637667 STX19Q8N4C7 294 aa15.9■□□□□ 0.14
CLN6-222ENST00000637667 DHRSXQ8N5I4 330 aa15.9■□□□□ 0.14
CLN6-222ENST00000637667 LINC00311Q8N616 119 aa15.9■□□□□ 0.14
CLN6-222ENST00000637667 PACRGLQ8N7B6 248 aa15.9■□□□□ 0.14
CLN6-222ENST00000637667 UBALD1Q8TB05 177 aa15.9■□□□□ 0.14
CLN6-222ENST00000637667 CHPT1Q8WUD6 406 aa15.9■□□□□ 0.14
CLN6-222ENST00000637667 GGHQ92820 318 aa15.9■□□□□ 0.14
CLN6-222ENST00000637667 RCC1LQ96I51 464 aaKnown RBP15.9■□□□□ 0.14
CLN6-222ENST00000637667 NOL4LQ96MY1 436 aaPredicted RBP15.9■□□□□ 0.14
CLN6-222ENST00000637667 GFOD1Q9NXC2 390 aa15.9■□□□□ 0.14
CLN6-222ENST00000637667 IGHV1-3A0A0C4DH29 117 aa15.89■□□□□ 0.13
CLN6-222ENST00000637667 SERPINE3A8MV23 424 aa15.89■□□□□ 0.13
CLN6-222ENST00000637667 AIPO00170 330 aa15.89■□□□□ 0.13
CLN6-222ENST00000637667 SDCBPO00560 298 aaPredicted RBP15.89■□□□□ 0.13
CLN6-222ENST00000637667 ORC5O43913 435 aa15.89■□□□□ 0.13
CLN6-222ENST00000637667 REG1BP48304 166 aa15.89■□□□□ 0.13
CLN6-222ENST00000637667 ST3GAL4Q11206 333 aa15.89■□□□□ 0.13
CLN6-222ENST00000637667 EBI3Q14213 229 aa15.89■□□□□ 0.13
CLN6-222ENST00000637667 JAGN1Q8N5M9 183 aa15.89■□□□□ 0.13
CLN6-222ENST00000637667 C8orf31Q8N9H6 132 aa15.89■□□□□ 0.13
CLN6-222ENST00000637667 MUL1Q969V5 352 aa15.89■□□□□ 0.13
CLN6-222ENST00000637667 OR14A2Q96R54 314 aa15.89■□□□□ 0.13
CLN6-222ENST00000637667 SPACA1Q9HBV2 294 aa15.89■□□□□ 0.13
CLN6-222ENST00000637667 RCC2Q9P258 522 aaKnown RBP15.89■□□□□ 0.13
CLN6-222ENST00000637667 MRPS28Q9Y2Q9 187 aaKnown RBP15.89■□□□□ 0.13
CLN6-222ENST00000637667 IGHV3-72A0A0B4J1Y9 119 aa15.88■□□□□ 0.13
CLN6-222ENST00000637667 A0A1W2PPK0 400 aa15.88■□□□□ 0.13
CLN6-222ENST00000637667 EFCAB10A6NFE3 127 aa15.88■□□□□ 0.13
CLN6-222ENST00000637667 TAS2R43P59537 309 aa15.88■□□□□ 0.13
CLN6-222ENST00000637667 FAM53AQ6NSI3 398 aaPredicted RBP15.88■□□□□ 0.13
CLN6-222ENST00000637667 GLIPR1L1Q6UWM5 242 aa15.88■□□□□ 0.13
CLN6-222ENST00000637667 IZUMO1Q8IYV9 350 aa15.88■□□□□ 0.13
CLN6-222ENST00000637667 MRPS24Q96EL2 167 aaKnown RBP15.88■□□□□ 0.13
CLN6-222ENST00000637667 IGHV3-43A0A0B4J1X8 118 aa15.87■□□□□ 0.13
CLN6-222ENST00000637667 PNMA8CA0A1B0GUJ8 204 aa15.87■□□□□ 0.13
CLN6-222ENST00000637667 MCRIP1C9JLW8 97 aa15.87■□□□□ 0.13
CLN6-222ENST00000637667 DUS4LO95620 317 aaKnown RBP15.87■□□□□ 0.13
CLN6-222ENST00000637667 IGHG2P01859 326 aa15.87■□□□□ 0.13
CLN6-222ENST00000637667 IGHV3-43DP0DP04 118 aa15.87■□□□□ 0.13
CLN6-222ENST00000637667 IL3RAP26951 378 aa15.87■□□□□ 0.13
CLN6-222ENST00000637667 RPL23AP62750 156 aaKnown RBP15.87■□□□□ 0.13
CLN6-222ENST00000637667 SLC35E3Q7Z769 313 aa15.87■□□□□ 0.13
CLN6-222ENST00000637667 LINC00482Q8N8I6 264 aa15.87■□□□□ 0.13
CLN6-222ENST00000637667 EAF1Q96JC9 268 aaPredicted RBP15.87■□□□□ 0.13
CLN6-222ENST00000637667 LINC00527Q9UJ94 153 aa15.87■□□□□ 0.13
CLN6-222ENST00000637667 C12orf77C9JDV5 145 aa15.86■□□□□ 0.13
CLN6-222ENST00000637667 MPIG6BO95866 241 aa15.86■□□□□ 0.13
CLN6-222ENST00000637667 Q3ZCU0 254 aa15.86■□□□□ 0.13
CLN6-222ENST00000637667 AWAT2Q6E213 333 aa15.86■□□□□ 0.13
CLN6-222ENST00000637667 RAB12Q6IQ22 244 aa15.86■□□□□ 0.13
CLN6-222ENST00000637667 ETV3LQ6ZN32 361 aa15.86■□□□□ 0.13
CLN6-222ENST00000637667 OR2W3Q7Z3T1 314 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms