RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 CCRL2O00421 344 aa14.57□□□□□ -0.08
CLN6-220ENST00000637450 GEMIN2O14893 280 aaKnown RBP14.57□□□□□ -0.08
CLN6-220ENST00000637450 WBP4O75554 376 aaKnown RBP14.57□□□□□ -0.08
CLN6-220ENST00000637450 CSTBP04080 98 aaKnown RBP14.57□□□□□ -0.08
CLN6-220ENST00000637450 GAPDHP04406 335 aaKnown RBP14.57□□□□□ -0.08
CLN6-220ENST00000637450 DCKP27707 260 aa14.57□□□□□ -0.08
CLN6-220ENST00000637450 SLC6A1P30531 599 aa14.57□□□□□ -0.08
CLN6-220ENST00000637450 ETV1P50549 477 aa14.57□□□□□ -0.08
CLN6-220ENST00000637450 C18orf65Q6ZTR6 163 aa14.57□□□□□ -0.08
CLN6-220ENST00000637450 SLC35E3Q7Z769 313 aa14.57□□□□□ -0.08
CLN6-220ENST00000637450 MOB3BQ86TA1 216 aa14.57□□□□□ -0.08
CLN6-220ENST00000637450 LINC00596Q86U02 117 aa14.57□□□□□ -0.08
CLN6-220ENST00000637450 LINC00311Q8N616 119 aa14.57□□□□□ -0.08
CLN6-220ENST00000637450 COMMD1Q8N668 190 aa14.57□□□□□ -0.08
CLN6-220ENST00000637450 OR52M1Q8NGK5 317 aa14.57□□□□□ -0.08
CLN6-220ENST00000637450 S100A14Q9HCY8 104 aa14.57□□□□□ -0.08
CLN6-220ENST00000637450 SIRT4Q9Y6E7 314 aaPredicted RBP14.57□□□□□ -0.08
CLN6-220ENST00000637450 NBEAL2Q6ZNJ1 2754 aa14.56□□□□□ -0.08
CLN6-220ENST00000637450 TMEM30CPA0ZSE6 113 aa14.56□□□□□ -0.08
CLN6-220ENST00000637450 LINC01548A6NM66 108 aa14.56□□□□□ -0.08
CLN6-220ENST00000637450 OGG1O15527 345 aa14.56□□□□□ -0.08
CLN6-220ENST00000637450 BDKRB2P30411 391 aa14.56□□□□□ -0.08
CLN6-220ENST00000637450 MYCNOSP40205 109 aa14.56□□□□□ -0.08
CLN6-220ENST00000637450 PPP3R1P63098 170 aa14.56□□□□□ -0.08
CLN6-220ENST00000637450 SLC35B1P78383 322 aa14.56□□□□□ -0.08
CLN6-220ENST00000637450 DDI2Q5TDH0 399 aa14.56□□□□□ -0.08
CLN6-220ENST00000637450 OR2G6Q5TZ20 316 aa14.56□□□□□ -0.08
CLN6-220ENST00000637450 TMPRSS11AQ6ZMR5 421 aa14.56□□□□□ -0.08
CLN6-220ENST00000637450 C8orf86Q6ZUL3 223 aa14.56□□□□□ -0.08
CLN6-220ENST00000637450 STPG2Q8N412 459 aa14.56□□□□□ -0.08
CLN6-220ENST00000637450 Q8N6K4 173 aa14.56□□□□□ -0.08
CLN6-220ENST00000637450 C8orf31Q8N9H6 132 aa14.56□□□□□ -0.08
CLN6-220ENST00000637450 ARL11Q969Q4 196 aa14.56□□□□□ -0.08
CLN6-220ENST00000637450 EAF1Q96JC9 268 aaPredicted RBP14.56□□□□□ -0.08
CLN6-220ENST00000637450 S100A13Q99584 98 aa14.56□□□□□ -0.08
CLN6-220ENST00000637450 PAK1IP1Q9NWT1 392 aaPredicted RBP14.56□□□□□ -0.08
CLN6-220ENST00000637450 BABAM2Q9NXR7 383 aa14.56□□□□□ -0.08
CLN6-220ENST00000637450 ORC5O43913 435 aa14.55□□□□□ -0.08
CLN6-220ENST00000637450 ZNF780AO75290 641 aaPredicted RBP14.55□□□□□ -0.08
CLN6-220ENST00000637450 MT-ND4P03905 459 aa14.55□□□□□ -0.08
CLN6-220ENST00000637450 SERPINA2P20848 420 aa14.55□□□□□ -0.08
CLN6-220ENST00000637450 REG1BP48304 166 aa14.55□□□□□ -0.08
CLN6-220ENST00000637450 MPV17LQ2QL34 196 aa14.55□□□□□ -0.08
CLN6-220ENST00000637450 TGIF2LXQ8IUE1 241 aa14.55□□□□□ -0.08
CLN6-220ENST00000637450 FOXRED2Q8IWF2 684 aa14.55□□□□□ -0.08
CLN6-220ENST00000637450 IZUMO1Q8IYV9 350 aa14.55□□□□□ -0.08
CLN6-220ENST00000637450 PQLC1Q8N2U9 271 aa14.55□□□□□ -0.08
CLN6-220ENST00000637450 CCDC107Q8WV48 283 aa14.55□□□□□ -0.08
CLN6-220ENST00000637450 DPF1Q92782 380 aa14.55□□□□□ -0.08
CLN6-220ENST00000637450 ORAI1Q96D31 301 aa14.55□□□□□ -0.08
CLN6-220ENST00000637450 P2RX4Q99571 388 aa14.55□□□□□ -0.08
CLN6-220ENST00000637450 MCRIP2Q9BUT9 160 aaKnown RBP14.55□□□□□ -0.08
CLN6-220ENST00000637450 GFOD1Q9NXC2 390 aa14.55□□□□□ -0.08
CLN6-220ENST00000637450 IGHV3-72A0A0B4J1Y9 119 aa14.54□□□□□ -0.08
CLN6-220ENST00000637450 NCBP2LA6PVI3 153 aaKnown RBP14.54□□□□□ -0.08
CLN6-220ENST00000637450 NUDT19A8MXV4 375 aa14.54□□□□□ -0.08
CLN6-220ENST00000637450 SDCBPO00560 298 aaPredicted RBP14.54□□□□□ -0.08
CLN6-220ENST00000637450 GPX5O75715 221 aa14.54□□□□□ -0.08
CLN6-220ENST00000637450 IGFBP3P17936 291 aaPredicted RBP14.54□□□□□ -0.08
CLN6-220ENST00000637450 ATAD3CQ5T2N8 411 aa14.54□□□□□ -0.08
CLN6-220ENST00000637450 FAM53AQ6NSI3 398 aaPredicted RBP14.54□□□□□ -0.08
CLN6-220ENST00000637450 ZNF497Q6ZNH5 498 aa14.54□□□□□ -0.08
CLN6-220ENST00000637450 OR2T10Q8NGZ9 312 aa14.54□□□□□ -0.08
CLN6-220ENST00000637450 UBALD1Q8TB05 177 aa14.54□□□□□ -0.08
CLN6-220ENST00000637450 ST6GALNAC6Q969X2 333 aa14.54□□□□□ -0.08
CLN6-220ENST00000637450 SMIM19Q96E16 107 aa14.54□□□□□ -0.08
CLN6-220ENST00000637450 ABCG5Q9H222 651 aa14.54□□□□□ -0.08
CLN6-220ENST00000637450 TRBV5-5A0A0J9YX44 114 aa14.53□□□□□ -0.08
CLN6-220ENST00000637450 A0A1W2PP11 408 aa14.53□□□□□ -0.08
CLN6-220ENST00000637450 GTF2F2P13984 249 aa14.53□□□□□ -0.08
CLN6-220ENST00000637450 CD1BP29016 333 aa14.53□□□□□ -0.08
CLN6-220ENST00000637450 GPR12P47775 334 aa14.53□□□□□ -0.08
CLN6-220ENST00000637450 RIPK1Q13546 671 aa14.53□□□□□ -0.08
CLN6-220ENST00000637450 Q3ZCU0 254 aa14.53□□□□□ -0.08
CLN6-220ENST00000637450 SLC22A6Q4U2R8 563 aa14.53□□□□□ -0.08
CLN6-220ENST00000637450 C11orf87Q6NUJ2 197 aa14.53□□□□□ -0.08
CLN6-220ENST00000637450 TEX38Q6PEX7 206 aa14.53□□□□□ -0.08
CLN6-220ENST00000637450 ZNF695Q8IW36 515 aa14.53□□□□□ -0.08
CLN6-220ENST00000637450 Q8N9W7 124 aa14.53□□□□□ -0.08
CLN6-220ENST00000637450 TMEM104Q8NE00 496 aa14.53□□□□□ -0.08
CLN6-220ENST00000637450 KLHL30-AS1Q8NEE0 82 aa14.53□□□□□ -0.08
CLN6-220ENST00000637450 ZNF555Q8NEP9 628 aa14.53□□□□□ -0.08
CLN6-220ENST00000637450 OR13C5Q8NGS8 318 aa14.53□□□□□ -0.08
CLN6-220ENST00000637450 RTN4IP1Q8WWV3 396 aaPredicted RBP14.53□□□□□ -0.08
CLN6-220ENST00000637450 GHSRQ92847 366 aa14.53□□□□□ -0.08
CLN6-220ENST00000637450 ZNF184Q99676 751 aaPredicted RBP14.53□□□□□ -0.08
CLN6-220ENST00000637450 PLSCR3Q9NRY6 295 aa14.53□□□□□ -0.08
CLN6-220ENST00000637450 LIN7CQ9NUP9 197 aaKnown RBP14.53□□□□□ -0.08
CLN6-220ENST00000637450 DIMT1Q9UNQ2 313 aaKnown RBP14.53□□□□□ -0.08
CLN6-220ENST00000637450 IGHV3-43A0A0B4J1X8 118 aa14.52□□□□□ -0.09
CLN6-220ENST00000637450 AP4M1O00189 453 aa14.52□□□□□ -0.09
CLN6-220ENST00000637450 LALBAP00709 142 aa14.52□□□□□ -0.09
CLN6-220ENST00000637450 IGHV3-43DP0DP04 118 aa14.52□□□□□ -0.09
CLN6-220ENST00000637450 GPR176Q14439 515 aa14.52□□□□□ -0.09
CLN6-220ENST00000637450 PNLIPRP3Q17RR3 467 aa14.52□□□□□ -0.09
CLN6-220ENST00000637450 DMKNQ6E0U4 476 aaPredicted RBP14.52□□□□□ -0.09
CLN6-220ENST00000637450 RDH12Q96NR8 316 aa14.52□□□□□ -0.09
CLN6-220ENST00000637450 SMPD3Q9NY59 655 aaPredicted RBP14.52□□□□□ -0.09
CLN6-220ENST00000637450 CLEC2DQ9UHP7 191 aa14.52□□□□□ -0.09
CLN6-220ENST00000637450 TENM3Q9P273 2699 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms