RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 ASCL4Q6XD76 172 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 Q6ZRM9 215 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 ZDHHC23Q8IYP9 409 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 ADGRG7Q96K78 797 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 HIST1H2AAQ96QV6 131 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 RNF150Q9ULK6 438 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 CHD3Q12873 2000 aaKnown RBP11.99□□□□□ -0.49
CACNA1A-228ENST00000636610 SERPINE2P07093 398 aa11.99□□□□□ -0.49
CACNA1A-228ENST00000636610 FABP1P07148 127 aa11.99□□□□□ -0.49
CACNA1A-228ENST00000636610 OR8U8P0C7N1 319 aa11.99□□□□□ -0.49
CACNA1A-228ENST00000636610 CLEC12BQ2HXU8 276 aa11.99□□□□□ -0.49
CACNA1A-228ENST00000636610 AKR1C8PQ5T2L2 129 aa11.99□□□□□ -0.49
CACNA1A-228ENST00000636610 SPSB3Q6PJ21 355 aa11.99□□□□□ -0.49
CACNA1A-228ENST00000636610 CXorf67Q86X51 503 aaPredicted RBP11.99□□□□□ -0.49
CACNA1A-228ENST00000636610 MKXQ8IYA7 352 aa11.99□□□□□ -0.49
CACNA1A-228ENST00000636610 CMTM1Q8IZ96 169 aa11.99□□□□□ -0.49
CACNA1A-228ENST00000636610 PSMF1Q92530 271 aa11.99□□□□□ -0.49
CACNA1A-228ENST00000636610 PLEKHF2Q9H8W4 249 aa11.99□□□□□ -0.49
CACNA1A-228ENST00000636610 CLN5O75503 358 aa11.99□□□□□ -0.49
CACNA1A-228ENST00000636610 RPL23AP62750 156 aaKnown RBP11.99□□□□□ -0.49
CACNA1A-228ENST00000636610 DCAF12Q5T6F0 453 aa11.99□□□□□ -0.49
CACNA1A-228ENST00000636610 KCNE4Q8WWG9 221 aa11.99□□□□□ -0.49
CACNA1A-228ENST00000636610 FAM86C1Q9NVL1 165 aa11.99□□□□□ -0.49
CACNA1A-228ENST00000636610 LOXL2Q9Y4K0 774 aa11.99□□□□□ -0.49
CACNA1A-228ENST00000636610 KIAA1549Q9HCM3 1950 aa11.98□□□□□ -0.49
CACNA1A-228ENST00000636610 TGIF2-C20orf24A0A0A6YYL0 155 aa11.98□□□□□ -0.49
CACNA1A-228ENST00000636610 IFNA4P05014 189 aa11.98□□□□□ -0.49
CACNA1A-228ENST00000636610 CEBPDP49716 269 aaPredicted RBP11.98□□□□□ -0.49
CACNA1A-228ENST00000636610 ELLP55199 621 aaPredicted RBP11.98□□□□□ -0.49
CACNA1A-228ENST00000636610 RAB11AP62491 216 aa11.98□□□□□ -0.49
CACNA1A-228ENST00000636610 DLK1P80370 383 aa11.98□□□□□ -0.49
CACNA1A-228ENST00000636610 ZFP36L1Q07352 338 aaKnown RBP11.98□□□□□ -0.49
CACNA1A-228ENST00000636610 KIAA0141Q14154 515 aaPredicted RBP11.98□□□□□ -0.49
CACNA1A-228ENST00000636610 ZNF266Q14584 549 aa11.98□□□□□ -0.49
CACNA1A-228ENST00000636610 ALKBH2Q6NS38 261 aa11.98□□□□□ -0.49
CACNA1A-228ENST00000636610 CDPF1Q6NVV7 123 aa11.98□□□□□ -0.49
CACNA1A-228ENST00000636610 Q6ZSR3 168 aa11.98□□□□□ -0.49
CACNA1A-228ENST00000636610 LRTM2Q8N967 370 aa11.98□□□□□ -0.49
CACNA1A-228ENST00000636610 MIOXQ9UGB7 285 aa11.98□□□□□ -0.49
CACNA1A-228ENST00000636610 PGLYRP1O75594 196 aaPredicted RBP11.98□□□□□ -0.49
CACNA1A-228ENST00000636610 SLC34A2O95436 690 aa11.98□□□□□ -0.49
CACNA1A-228ENST00000636610 PLGLB1Q02325 96 aa11.98□□□□□ -0.49
CACNA1A-228ENST00000636610 FOXO1Q12778 655 aa11.98□□□□□ -0.49
CACNA1A-228ENST00000636610 NUFIP2Q7Z417 695 aaKnown RBP11.98□□□□□ -0.49
CACNA1A-228ENST00000636610 ZNF429Q86V71 674 aa11.98□□□□□ -0.49
CACNA1A-228ENST00000636610 WDR5BQ86VZ2 330 aa11.98□□□□□ -0.49
CACNA1A-228ENST00000636610 PLPPR2Q96GM1 343 aa11.98□□□□□ -0.49
CACNA1A-228ENST00000636610 C1QTNF5Q9BXJ0 243 aa11.98□□□□□ -0.49
CACNA1A-228ENST00000636610 GSN-AS1Q9NRJ2 163 aa11.98□□□□□ -0.49
CACNA1A-228ENST00000636610 LYRM2Q9NU23 88 aaPredicted RBP11.98□□□□□ -0.49
CACNA1A-228ENST00000636610 PRSS50Q9UI38 385 aa11.98□□□□□ -0.49
CACNA1A-228ENST00000636610 CD300LBA8K4G0 201 aa11.97□□□□□ -0.49
CACNA1A-228ENST00000636610 CXCL1P09341 107 aa11.97□□□□□ -0.49
CACNA1A-228ENST00000636610 AGAP20933 346 aa11.97□□□□□ -0.49
CACNA1A-228ENST00000636610 B2MP61769 119 aa11.97□□□□□ -0.49
CACNA1A-228ENST00000636610 ABLIM2Q6H8Q1 611 aa11.97□□□□□ -0.49
CACNA1A-228ENST00000636610 REPIN1Q9BWE0 567 aaKnown RBP11.97□□□□□ -0.49
CACNA1A-228ENST00000636610 RNF122Q9H9V4 155 aa11.97□□□□□ -0.49
CACNA1A-228ENST00000636610 TAAR3PQ9P1P4 343 aa11.97□□□□□ -0.49
CACNA1A-228ENST00000636610 OR14J1Q9UGF5 321 aa11.97□□□□□ -0.49
CACNA1A-228ENST00000636610 CACNA1HO95180 2353 aa11.97□□□□□ -0.49
CACNA1A-228ENST00000636610 NTN3O00634 580 aaPredicted RBP11.97□□□□□ -0.49
CACNA1A-228ENST00000636610 CYTIPO60759 359 aa11.97□□□□□ -0.49
CACNA1A-228ENST00000636610 TUSC2O75896 110 aa11.97□□□□□ -0.49
CACNA1A-228ENST00000636610 ERVS71-1P61550 626 aa11.97□□□□□ -0.49
CACNA1A-228ENST00000636610 GFI1BQ5VTD9 330 aa11.97□□□□□ -0.49
CACNA1A-228ENST00000636610 GPR146Q96CH1 333 aa11.97□□□□□ -0.49
CACNA1A-228ENST00000636610 DEFB127Q9H1M4 99 aa11.97□□□□□ -0.49
CACNA1A-228ENST00000636610 ZNF665Q9H7R5 613 aa11.97□□□□□ -0.49
CACNA1A-228ENST00000636610 CACNG5Q9UF02 275 aa11.97□□□□□ -0.49
CACNA1A-228ENST00000636610 STRAPQ9Y3F4 350 aaKnown RBP11.97□□□□□ -0.49
CACNA1A-228ENST00000636610 WSB1Q9Y6I7 421 aa11.97□□□□□ -0.49
CACNA1A-228ENST00000636610 MGAQ8IWI9 3026 aa11.97□□□□□ -0.49
CACNA1A-228ENST00000636610 CDS2O95674 445 aa11.97□□□□□ -0.49
CACNA1A-228ENST00000636610 GFRA1P56159 465 aa11.97□□□□□ -0.49
CACNA1A-228ENST00000636610 ERVFRD-1P60508 538 aa11.97□□□□□ -0.49
CACNA1A-228ENST00000636610 SPINK9Q5DT21 86 aa11.97□□□□□ -0.49
CACNA1A-228ENST00000636610 ATP1A1-AS1Q5TC04 95 aa11.97□□□□□ -0.49
CACNA1A-228ENST00000636610 OR8G2PQ6IF36 304 aa11.97□□□□□ -0.49
CACNA1A-228ENST00000636610 OR10J5Q8NHC4 309 aa11.97□□□□□ -0.49
CACNA1A-228ENST00000636610 DEFA4P12838 97 aa11.96□□□□□ -0.49
CACNA1A-228ENST00000636610 LINC00205P59089 165 aa11.96□□□□□ -0.49
CACNA1A-228ENST00000636610 FGF12P61328 243 aa11.96□□□□□ -0.49
CACNA1A-228ENST00000636610 HMGN3Q15651 99 aa11.96□□□□□ -0.49
CACNA1A-228ENST00000636610 RBMXL1Q96E39 390 aaKnown RBP11.96□□□□□ -0.49
CACNA1A-228ENST00000636610 TRAV24A0A0B4J272 114 aa11.96□□□□□ -0.5
CACNA1A-228ENST00000636610 CYB5BO43169 146 aa11.96□□□□□ -0.5
CACNA1A-228ENST00000636610 NAPSAO96009 420 aa11.96□□□□□ -0.5
CACNA1A-228ENST00000636610 VDAC1P21796 283 aa11.96□□□□□ -0.5
CACNA1A-228ENST00000636610 BMP5P22003 454 aa11.96□□□□□ -0.5
CACNA1A-228ENST00000636610 PAX9P55771 341 aa11.96□□□□□ -0.5
CACNA1A-228ENST00000636610 UCP3P55916 312 aa11.96□□□□□ -0.5
CACNA1A-228ENST00000636610 EIF3IQ13347 325 aaKnown RBP11.96□□□□□ -0.5
CACNA1A-228ENST00000636610 ALKBH6Q3KRA9 238 aa11.96□□□□□ -0.5
CACNA1A-228ENST00000636610 SPANXN5Q5MJ07 72 aa11.96□□□□□ -0.5
CACNA1A-228ENST00000636610 C6orf15Q6UXA7 325 aaPredicted RBP11.96□□□□□ -0.5
CACNA1A-228ENST00000636610 BEND4Q6ZU67 534 aa11.96□□□□□ -0.5
CACNA1A-228ENST00000636610 PLPPR1Q8TBJ4 325 aa11.96□□□□□ -0.5
CACNA1A-228ENST00000636610 Q8WTZ3 238 aa11.96□□□□□ -0.5
CACNA1A-228ENST00000636610 SLC25A31Q9H0C2 315 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms