RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 FSTP19883 344 aa14.28□□□□□ -0.12
PNKP-225ENST00000636214 RCN1Q15293 331 aa14.28□□□□□ -0.12
PNKP-225ENST00000636214 THRSPQ92748 146 aa14.28□□□□□ -0.12
PNKP-225ENST00000636214 GGHQ92820 318 aa14.28□□□□□ -0.12
PNKP-225ENST00000636214 MYDGFQ969H8 173 aa14.28□□□□□ -0.12
PNKP-225ENST00000636214 ARL11Q969Q4 196 aa14.28□□□□□ -0.12
PNKP-225ENST00000636214 MRPS28Q9Y2Q9 187 aaKnown RBP14.28□□□□□ -0.12
PNKP-225ENST00000636214 PSMB11A5LHX3 300 aa14.27□□□□□ -0.13
PNKP-225ENST00000636214 MCRIP1C9JLW8 97 aa14.27□□□□□ -0.13
PNKP-225ENST00000636214 CCRL2O00421 344 aa14.27□□□□□ -0.13
PNKP-225ENST00000636214 SDCBPO00560 298 aaPredicted RBP14.27□□□□□ -0.13
PNKP-225ENST00000636214 PIN1P1O15428 100 aa14.27□□□□□ -0.13
PNKP-225ENST00000636214 IGKV1D-33P01593 117 aa14.27□□□□□ -0.13
PNKP-225ENST00000636214 IGKV1-33P01594 117 aa14.27□□□□□ -0.13
PNKP-225ENST00000636214 PRB2P02812 416 aaPredicted RBP14.27□□□□□ -0.13
PNKP-225ENST00000636214 IGFBP3P17936 291 aaPredicted RBP14.27□□□□□ -0.13
PNKP-225ENST00000636214 MAPK3P27361 379 aaPredicted RBP14.27□□□□□ -0.13
PNKP-225ENST00000636214 CAPGP40121 348 aa14.27□□□□□ -0.13
PNKP-225ENST00000636214 SLC35A2P78381 396 aa14.27□□□□□ -0.13
PNKP-225ENST00000636214 HNF4GQ14541 408 aa14.27□□□□□ -0.13
PNKP-225ENST00000636214 UTF1Q5T230 341 aa14.27□□□□□ -0.13
PNKP-225ENST00000636214 AWAT2Q6E213 333 aa14.27□□□□□ -0.13
PNKP-225ENST00000636214 MOB3BQ86TA1 216 aa14.27□□□□□ -0.13
PNKP-225ENST00000636214 CCDC107Q8WV48 283 aa14.27□□□□□ -0.13
PNKP-225ENST00000636214 MUL1Q969V5 352 aa14.27□□□□□ -0.13
PNKP-225ENST00000636214 OR14A2Q96R54 314 aa14.27□□□□□ -0.13
PNKP-225ENST00000636214 NECAP2Q9NVZ3 263 aa14.27□□□□□ -0.13
PNKP-225ENST00000636214 CNOT2Q9NZN8 540 aaKnown RBP14.27□□□□□ -0.13
PNKP-225ENST00000636214 A0A1W2PPE3 182 aa14.26□□□□□ -0.13
PNKP-225ENST00000636214 A0A1W2PPI3 338 aa14.26□□□□□ -0.13
PNKP-225ENST00000636214 FAM90A18PA6NE21 464 aa14.26□□□□□ -0.13
PNKP-225ENST00000636214 FAM90A16PA6NEW6 464 aa14.26□□□□□ -0.13
PNKP-225ENST00000636214 FAM90A20PA6NIJ5 464 aa14.26□□□□□ -0.13
PNKP-225ENST00000636214 FAM90A9PA6NNJ1 464 aa14.26□□□□□ -0.13
PNKP-225ENST00000636214 FAM90A12PA8MX19 464 aa14.26□□□□□ -0.13
PNKP-225ENST00000636214 FAM90A5PA8MXJ8 464 aa14.26□□□□□ -0.13
PNKP-225ENST00000636214 SPINT2O43291 252 aa14.26□□□□□ -0.13
PNKP-225ENST00000636214 FGF16O43320 207 aa14.26□□□□□ -0.13
PNKP-225ENST00000636214 GPX5O75715 221 aa14.26□□□□□ -0.13
PNKP-225ENST00000636214 LALBAP00709 142 aa14.26□□□□□ -0.13
PNKP-225ENST00000636214 MAS1P04201 325 aa14.26□□□□□ -0.13
PNKP-225ENST00000636214 GAPDHP04406 335 aaKnown RBP14.26□□□□□ -0.13
PNKP-225ENST00000636214 FAM90A15PP0C7V4 464 aa14.26□□□□□ -0.13
PNKP-225ENST00000636214 FAM90A13PP0C7W8 464 aa14.26□□□□□ -0.13
PNKP-225ENST00000636214 FAM90A14PP0C7W9 464 aa14.26□□□□□ -0.13
PNKP-225ENST00000636214 FAM90A24PP0C7X0 464 aa14.26□□□□□ -0.13
PNKP-225ENST00000636214 ADARB1P78563 741 aaKnown RBP14.26□□□□□ -0.13
PNKP-225ENST00000636214 GLIPR1L1Q6UWM5 242 aa14.26□□□□□ -0.13
PNKP-225ENST00000636214 OR52M1Q8NGK5 317 aa14.26□□□□□ -0.13
PNKP-225ENST00000636214 MRAPQ8TCY5 172 aa14.26□□□□□ -0.13
PNKP-225ENST00000636214 CHPT1Q8WUD6 406 aa14.26□□□□□ -0.13
PNKP-225ENST00000636214 TRAPPC2LQ9UL33 140 aa14.26□□□□□ -0.13
PNKP-225ENST00000636214 A0A1W2PPK0 400 aa14.25□□□□□ -0.13
PNKP-225ENST00000636214 SERPINE3A8MV23 424 aa14.25□□□□□ -0.13
PNKP-225ENST00000636214 ORC5O43913 435 aa14.25□□□□□ -0.13
PNKP-225ENST00000636214 AMY1AP04745 511 aa14.25□□□□□ -0.13
PNKP-225ENST00000636214 AMY2AP04746 511 aa14.25□□□□□ -0.13
PNKP-225ENST00000636214 SLC35B1P78383 322 aa14.25□□□□□ -0.13
PNKP-225ENST00000636214 C6orf183Q5T699 404 aa14.25□□□□□ -0.13
PNKP-225ENST00000636214 AHSA2Q719I0 299 aa14.25□□□□□ -0.13
PNKP-225ENST00000636214 NKAIN3Q8N8D7 197 aa14.25□□□□□ -0.13
PNKP-225ENST00000636214 OR51D1Q8NGF3 324 aa14.25□□□□□ -0.13
PNKP-225ENST00000636214 PHF21AQ96BD5 680 aa14.25□□□□□ -0.13
PNKP-225ENST00000636214 MRPS24Q96EL2 167 aaKnown RBP14.25□□□□□ -0.13
PNKP-225ENST00000636214 PGLYRP3Q96LB9 341 aa14.25□□□□□ -0.13
PNKP-225ENST00000636214 ETAA1Q9NY74 926 aa14.25□□□□□ -0.13
PNKP-225ENST00000636214 ZNF581Q9P0T4 197 aa14.25□□□□□ -0.13
PNKP-225ENST00000636214 GNG12Q9UBI6 72 aa14.25□□□□□ -0.13
PNKP-225ENST00000636214 ERGIC3Q9Y282 383 aa14.25□□□□□ -0.13
PNKP-225ENST00000636214 TRAV8-7A0A075B6U6 113 aa14.24□□□□□ -0.13
PNKP-225ENST00000636214 A0A1W2PP11 408 aa14.24□□□□□ -0.13
PNKP-225ENST00000636214 MAGEA13PA6NCF6 341 aa14.24□□□□□ -0.13
PNKP-225ENST00000636214 NCBP2LA6PVI3 153 aaKnown RBP14.24□□□□□ -0.13
PNKP-225ENST00000636214 CELP19835 753 aa14.24□□□□□ -0.13
PNKP-225ENST00000636214 WNT4P56705 351 aa14.24□□□□□ -0.13
PNKP-225ENST00000636214 ZNF816Q0VGE8 651 aaPredicted RBP14.24□□□□□ -0.13
PNKP-225ENST00000636214 DOC2BQ14184 412 aa14.24□□□□□ -0.13
PNKP-225ENST00000636214 FBLN7Q53RD9 439 aa14.24□□□□□ -0.13
PNKP-225ENST00000636214 TRAT1Q6PIZ9 186 aa14.24□□□□□ -0.13
PNKP-225ENST00000636214 ZNF497Q6ZNH5 498 aa14.24□□□□□ -0.13
PNKP-225ENST00000636214 FOXRED2Q8IWF2 684 aa14.24□□□□□ -0.13
PNKP-225ENST00000636214 LINC00311Q8N616 119 aa14.24□□□□□ -0.13
PNKP-225ENST00000636214 C5orf56Q8N8D9 126 aa14.24□□□□□ -0.13
PNKP-225ENST00000636214 BPIFB6Q8NFQ5 453 aa14.24□□□□□ -0.13
PNKP-225ENST00000636214 UBALD1Q8TB05 177 aa14.24□□□□□ -0.13
PNKP-225ENST00000636214 GFOD1Q9NXC2 390 aa14.24□□□□□ -0.13
PNKP-225ENST00000636214 TRBV5-7A0A0A0MS05 114 aa14.23□□□□□ -0.13
PNKP-225ENST00000636214 IGHV3-43A0A0B4J1X8 118 aa14.23□□□□□ -0.13
PNKP-225ENST00000636214 IGHV1-3A0A0C4DH29 117 aa14.23□□□□□ -0.13
PNKP-225ENST00000636214 CRTAPO75718 401 aaPredicted RBP14.23□□□□□ -0.13
PNKP-225ENST00000636214 IGHV3-43DP0DP04 118 aa14.23□□□□□ -0.13
PNKP-225ENST00000636214 REG1BP48304 166 aa14.23□□□□□ -0.13
PNKP-225ENST00000636214 RPS11P62280 158 aaKnown RBP eCLIP14.23□□□□□ -0.13
PNKP-225ENST00000636214 DIAPH2-AS1Q14236 149 aa14.23□□□□□ -0.13
PNKP-225ENST00000636214 TMEM30BQ3MIR4 351 aa14.23□□□□□ -0.13
PNKP-225ENST00000636214 Q3ZCU0 254 aa14.23□□□□□ -0.13
PNKP-225ENST00000636214 TCTEX1D4Q5JR98 221 aa14.23□□□□□ -0.13
PNKP-225ENST00000636214 SYT6Q5T7P8 510 aaPredicted RBP14.23□□□□□ -0.13
PNKP-225ENST00000636214 RAB12Q6IQ22 244 aa14.23□□□□□ -0.13
PNKP-225ENST00000636214 SLC35E3Q7Z769 313 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms