RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-238ENST00000635997 CACNG5Q9UF02 275 aa12.41□□□□□ -0.42
NEDD4L-238ENST00000635997 ANKRD36A6QL64 1941 aa12.41□□□□□ -0.42
NEDD4L-238ENST00000635997 HBE1P02100 147 aa12.41□□□□□ -0.42
NEDD4L-238ENST00000635997 ZNF837Q96EG3 531 aaPredicted RBP12.41□□□□□ -0.42
NEDD4L-238ENST00000635997 IGKV1D-43A0A0B4J1Z2 117 aa12.41□□□□□ -0.42
NEDD4L-238ENST00000635997 JTBO76095 146 aa12.41□□□□□ -0.42
NEDD4L-238ENST00000635997 RNF212Q495C1 297 aa12.41□□□□□ -0.42
NEDD4L-238ENST00000635997 ZNRF4Q8WWF5 429 aa12.41□□□□□ -0.42
NEDD4L-238ENST00000635997 CCL28Q9NRJ3 127 aa12.41□□□□□ -0.42
NEDD4L-238ENST00000635997 OR5H1A6NKK0 313 aa12.4□□□□□ -0.42
NEDD4L-238ENST00000635997 NPBWR1P48145 328 aa12.4□□□□□ -0.42
NEDD4L-238ENST00000635997 REG1BP48304 166 aa12.4□□□□□ -0.42
NEDD4L-238ENST00000635997 PEAR1Q5VY43 1037 aaPredicted RBP12.4□□□□□ -0.42
NEDD4L-238ENST00000635997 ZNF75AQ96N20 296 aa12.4□□□□□ -0.42
NEDD4L-238ENST00000635997 SLC25A32Q9H2D1 315 aa12.4□□□□□ -0.42
NEDD4L-238ENST00000635997 TRAV38-1A0A0B4J264 116 aa12.4□□□□□ -0.42
NEDD4L-238ENST00000635997 MPC2O95563 127 aa12.4□□□□□ -0.42
NEDD4L-238ENST00000635997 FPR2P25090 351 aa12.4□□□□□ -0.42
NEDD4L-238ENST00000635997 FABP9Q0Z7S8 132 aa12.4□□□□□ -0.42
NEDD4L-238ENST00000635997 OR2F1Q13607 317 aa12.4□□□□□ -0.42
NEDD4L-238ENST00000635997 SLC25A47Q6Q0C1 308 aa12.4□□□□□ -0.42
NEDD4L-238ENST00000635997 HGDQ93099 445 aa12.4□□□□□ -0.42
NEDD4L-238ENST00000635997 TMEM230Q96A57 120 aa12.4□□□□□ -0.42
NEDD4L-238ENST00000635997 UHRF2Q96PU4 802 aa12.4□□□□□ -0.42
NEDD4L-238ENST00000635997 GTF3C1Q12789 2109 aa12.4□□□□□ -0.42
NEDD4L-238ENST00000635997 NSUN5P2Q63ZY6 315 aa12.4□□□□□ -0.42
NEDD4L-238ENST00000635997 OR5A2Q8NGI9 324 aa12.4□□□□□ -0.42
NEDD4L-238ENST00000635997 FBLIM1Q8WUP2 373 aa12.4□□□□□ -0.42
NEDD4L-238ENST00000635997 MARVELD3Q96A59 401 aa12.4□□□□□ -0.42
NEDD4L-238ENST00000635997 BORCS7Q96B45 105 aa12.4□□□□□ -0.42
NEDD4L-238ENST00000635997 RNF7Q9UBF6 113 aa12.4□□□□□ -0.42
NEDD4L-238ENST00000635997 METTL15P1P0C7V9 234 aa12.4□□□□□ -0.43
NEDD4L-238ENST00000635997 SPP1P10451 314 aa12.4□□□□□ -0.43
NEDD4L-238ENST00000635997 POLR2GP62487 172 aaKnown RBP eCLIP12.4□□□□□ -0.43
NEDD4L-238ENST00000635997 LINC01590Q5TEZ4 76 aa12.4□□□□□ -0.43
NEDD4L-238ENST00000635997 STPG2Q8N412 459 aa12.4□□□□□ -0.43
NEDD4L-238ENST00000635997 MRPS18AQ9NVS2 196 aaKnown RBP12.4□□□□□ -0.43
NEDD4L-238ENST00000635997 SULT1A3P0DMM9 295 aa12.39□□□□□ -0.43
NEDD4L-238ENST00000635997 SULT1A4P0DMN0 295 aa12.39□□□□□ -0.43
NEDD4L-238ENST00000635997 MRPS11P82912 194 aaKnown RBP12.39□□□□□ -0.43
NEDD4L-238ENST00000635997 KIAA0141Q14154 515 aaPredicted RBP12.39□□□□□ -0.43
NEDD4L-238ENST00000635997 ZNF600Q6ZNG1 722 aa12.39□□□□□ -0.43
NEDD4L-238ENST00000635997 TVP23CQ96ET8 276 aa12.39□□□□□ -0.43
NEDD4L-238ENST00000635997 GPHA2Q96T91 129 aa12.39□□□□□ -0.43
NEDD4L-238ENST00000635997 MED9Q9NWA0 146 aa12.39□□□□□ -0.43
NEDD4L-238ENST00000635997 FAM27E3Q08E93 113 aa12.39□□□□□ -0.43
NEDD4L-238ENST00000635997 RPUSD4Q96CM3 377 aaKnown RBP12.39□□□□□ -0.43
NEDD4L-238ENST00000635997 CCL13Q99616 98 aa12.39□□□□□ -0.43
NEDD4L-238ENST00000635997 NMES1Q9C002 83 aa12.39□□□□□ -0.43
NEDD4L-238ENST00000635997 FAM24AA6NFZ4 105 aa12.39□□□□□ -0.43
NEDD4L-238ENST00000635997 NPIPB9F8W1W9 429 aa12.39□□□□□ -0.43
NEDD4L-238ENST00000635997 OR10J4P0C629 311 aa12.39□□□□□ -0.43
NEDD4L-238ENST00000635997 G0S2P27469 103 aa12.39□□□□□ -0.43
NEDD4L-238ENST00000635997 CEBPDP49716 269 aaPredicted RBP12.39□□□□□ -0.43
NEDD4L-238ENST00000635997 UBE2G2P60604 165 aa12.39□□□□□ -0.43
NEDD4L-238ENST00000635997 TMEM267Q0VDI3 215 aaPredicted RBP12.39□□□□□ -0.43
NEDD4L-238ENST00000635997 GGNBP1Q5YKI7 109 aa12.39□□□□□ -0.43
NEDD4L-238ENST00000635997 GPX7Q96SL4 187 aaPredicted RBP12.39□□□□□ -0.43
NEDD4L-238ENST00000635997 NIPSNAP3BQ9BS92 247 aa12.39□□□□□ -0.43
NEDD4L-238ENST00000635997 UBE2L5PA0A1B0GUS4 154 aa12.38□□□□□ -0.43
NEDD4L-238ENST00000635997 ANKRD20A5PA0PJZ0 165 aa12.38□□□□□ -0.43
NEDD4L-238ENST00000635997 CRYM-AS1A6NIL9 109 aa12.38□□□□□ -0.43
NEDD4L-238ENST00000635997 SYNGR1O43759 233 aa12.38□□□□□ -0.43
NEDD4L-238ENST00000635997 ZIC3O60481 467 aa12.38□□□□□ -0.43
NEDD4L-238ENST00000635997 SSBP1Q04837 148 aaKnown RBP12.38□□□□□ -0.43
NEDD4L-238ENST00000635997 VWA1Q6PCB0 445 aa12.38□□□□□ -0.43
NEDD4L-238ENST00000635997 RNASE6Q93091 150 aaKnown RBP12.38□□□□□ -0.43
NEDD4L-238ENST00000635997 OR2V2Q96R30 315 aa12.38□□□□□ -0.43
NEDD4L-238ENST00000635997 C3orf85A0A1B0GTC6 90 aa12.38□□□□□ -0.43
NEDD4L-238ENST00000635997 C9orf170A2RU37 121 aa12.38□□□□□ -0.43
NEDD4L-238ENST00000635997 KLF7O75840 302 aaPredicted RBP12.38□□□□□ -0.43
NEDD4L-238ENST00000635997 PSMB3P49720 205 aa12.38□□□□□ -0.43
NEDD4L-238ENST00000635997 ITLN1Q8WWA0 313 aa12.38□□□□□ -0.43
NEDD4L-238ENST00000635997 RASL12Q9NYN1 266 aa12.38□□□□□ -0.43
NEDD4L-238ENST00000635997 ABCA2Q9BZC7 2435 aa12.38□□□□□ -0.43
NEDD4L-238ENST00000635997 PIN1P1O15428 100 aa12.38□□□□□ -0.43
NEDD4L-238ENST00000635997 MOGAT2Q3SYC2 334 aa12.38□□□□□ -0.43
NEDD4L-238ENST00000635997 HSD17B13Q7Z5P4 300 aaPredicted RBP12.38□□□□□ -0.43
NEDD4L-238ENST00000635997 MITD1Q8WV92 249 aa12.38□□□□□ -0.43
NEDD4L-238ENST00000635997 SOX7Q9BT81 388 aa12.38□□□□□ -0.43
NEDD4L-238ENST00000635997 RSRP1Q9BUV0 290 aa12.38□□□□□ -0.43
NEDD4L-238ENST00000635997 OR6C3Q9NZP0 311 aa12.38□□□□□ -0.43
NEDD4L-238ENST00000635997 CLN8Q9UBY8 286 aa12.38□□□□□ -0.43
NEDD4L-238ENST00000635997 IGF2P01344 180 aa12.38□□□□□ -0.43
NEDD4L-238ENST00000635997 NMBP08949 121 aa12.38□□□□□ -0.43
NEDD4L-238ENST00000635997 GAPTQ8N292 157 aa12.38□□□□□ -0.43
NEDD4L-238ENST00000635997 PIMREGQ9BSJ6 248 aa12.38□□□□□ -0.43
NEDD4L-238ENST00000635997 PPP1R3EQ9H7J1 279 aa12.38□□□□□ -0.43
NEDD4L-238ENST00000635997 LINC00587B1AMM8 73 aa12.37□□□□□ -0.43
NEDD4L-238ENST00000635997 ADRA2AP08913 450 aa12.37□□□□□ -0.43
NEDD4L-238ENST00000635997 GINS3Q9BRX5 216 aa12.37□□□□□ -0.43
NEDD4L-238ENST00000635997 PCGF1Q9BSM1 259 aa12.37□□□□□ -0.43
NEDD4L-238ENST00000635997 LSM2Q9Y333 95 aaKnown RBP12.37□□□□□ -0.43
NEDD4L-238ENST00000635997 CRHP06850 196 aa12.37□□□□□ -0.43
NEDD4L-238ENST00000635997 PPP1CCP36873 323 aaKnown RBP12.37□□□□□ -0.43
NEDD4L-238ENST00000635997 PMELP40967 661 aa12.37□□□□□ -0.43
NEDD4L-238ENST00000635997 DHODHQ02127 395 aa12.37□□□□□ -0.43
NEDD4L-238ENST00000635997 ST6GALNAC3Q8NDV1 305 aa12.37□□□□□ -0.43
NEDD4L-238ENST00000635997 NFAM1Q8NET5 270 aaPredicted RBP12.37□□□□□ -0.43
NEDD4L-238ENST00000635997 RXFP4Q8TDU9 374 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms