RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 MRGPRFQ96AM1 343 aa12.34□□□□□ -0.43
UBE3A-220ENST00000630424 ZNF714Q96N38 554 aa12.34□□□□□ -0.43
UBE3A-220ENST00000630424 NEU3Q9UQ49 428 aa12.34□□□□□ -0.43
UBE3A-220ENST00000630424 MMP24Q9Y5R2 645 aa12.34□□□□□ -0.43
UBE3A-220ENST00000630424 CADP27708 2225 aa12.34□□□□□ -0.43
UBE3A-220ENST00000630424 C1QAP02745 245 aa12.34□□□□□ -0.43
UBE3A-220ENST00000630424 TEX30Q5JUR7 227 aa12.34□□□□□ -0.43
UBE3A-220ENST00000630424 XAF1Q6GPH4 301 aa12.34□□□□□ -0.43
UBE3A-220ENST00000630424 FAM219AQ8IW50 185 aa12.34□□□□□ -0.43
UBE3A-220ENST00000630424 TMEM18Q96B42 140 aa12.34□□□□□ -0.43
UBE3A-220ENST00000630424 TECRQ9NZ01 308 aaKnown RBP12.34□□□□□ -0.43
UBE3A-220ENST00000630424 PRSS50Q9UI38 385 aa12.34□□□□□ -0.43
UBE3A-220ENST00000630424 IGKV1D-16P01601 117 aa12.33□□□□□ -0.44
UBE3A-220ENST00000630424 FGF8P55075 233 aaPredicted RBP12.33□□□□□ -0.44
UBE3A-220ENST00000630424 SLIRPQ9GZT3 109 aaKnown RBP12.33□□□□□ -0.44
UBE3A-220ENST00000630424 NIT2Q9NQR4 276 aa12.33□□□□□ -0.44
UBE3A-220ENST00000630424 PRR13Q9NZ81 148 aa12.33□□□□□ -0.44
UBE3A-220ENST00000630424 COL18A1P39060 1754 aa12.33□□□□□ -0.44
UBE3A-220ENST00000630424 MPC2O95563 127 aa12.33□□□□□ -0.44
UBE3A-220ENST00000630424 C1orf174Q8IYL3 243 aa12.33□□□□□ -0.44
UBE3A-220ENST00000630424 OR4X1Q8NH49 305 aa12.33□□□□□ -0.44
UBE3A-220ENST00000630424 ZNF519Q8TB69 540 aa12.33□□□□□ -0.44
UBE3A-220ENST00000630424 DYRK2Q92630 601 aa12.33□□□□□ -0.44
UBE3A-220ENST00000630424 ABHD1Q96SE0 405 aa12.33□□□□□ -0.44
UBE3A-220ENST00000630424 WASHC3Q9Y3C0 194 aa12.33□□□□□ -0.44
UBE3A-220ENST00000630424 OR2T8A6NH00 312 aa12.33□□□□□ -0.44
UBE3A-220ENST00000630424 CHST1O43916 411 aa12.33□□□□□ -0.44
UBE3A-220ENST00000630424 ZNF737O75373 536 aa12.33□□□□□ -0.44
UBE3A-220ENST00000630424 G0S2P27469 103 aa12.33□□□□□ -0.44
UBE3A-220ENST00000630424 GABRA6Q16445 453 aa12.33□□□□□ -0.44
UBE3A-220ENST00000630424 RNASEKQ6P5S7 137 aaKnown RBP12.33□□□□□ -0.44
UBE3A-220ENST00000630424 TMEM37Q8WXS4 190 aa12.33□□□□□ -0.44
UBE3A-220ENST00000630424 FBXL17Q9UF56 701 aa12.33□□□□□ -0.44
UBE3A-220ENST00000630424 OR2W1Q9Y3N9 320 aa12.33□□□□□ -0.44
UBE3A-220ENST00000630424 K7N7A8 449 aa12.33□□□□□ -0.44
UBE3A-220ENST00000630424 MGST3O14880 152 aa12.33□□□□□ -0.44
UBE3A-220ENST00000630424 RNFT1Q5M7Z0 435 aa12.33□□□□□ -0.44
UBE3A-220ENST00000630424 TDRD6O60522 2096 aaKnown RBP12.33□□□□□ -0.44
UBE3A-220ENST00000630424 OGG1O15527 345 aa12.32□□□□□ -0.44
UBE3A-220ENST00000630424 HLA-GP17693 338 aa12.32□□□□□ -0.44
UBE3A-220ENST00000630424 G6PCP35575 357 aa12.32□□□□□ -0.44
UBE3A-220ENST00000630424 PSG5Q15238 335 aa12.32□□□□□ -0.44
UBE3A-220ENST00000630424 RNF2Q99496 336 aa12.32□□□□□ -0.44
UBE3A-220ENST00000630424 RAB33BQ9H082 229 aa12.32□□□□□ -0.44
UBE3A-220ENST00000630424 Q9N2K0 584 aa12.32□□□□□ -0.44
UBE3A-220ENST00000630424 RNASEK-C17orf49H0YIS7 233 aa12.32□□□□□ -0.44
UBE3A-220ENST00000630424 J3QR06 171 aa12.32□□□□□ -0.44
UBE3A-220ENST00000630424 TMEM241Q24JQ0 296 aa12.32□□□□□ -0.44
UBE3A-220ENST00000630424 OR4P4Q8NGL7 312 aa12.32□□□□□ -0.44
UBE3A-220ENST00000630424 SMAD7O15105 426 aaKnown RBP12.32□□□□□ -0.44
UBE3A-220ENST00000630424 ZNF273Q14593 569 aa12.32□□□□□ -0.44
UBE3A-220ENST00000630424 STARD4Q96DR4 205 aa12.32□□□□□ -0.44
UBE3A-220ENST00000630424 PRDM14Q9GZV8 571 aa12.32□□□□□ -0.44
UBE3A-220ENST00000630424 CCL27Q9Y4X3 112 aa12.32□□□□□ -0.44
UBE3A-220ENST00000630424 ABCA7Q8IZY2 2146 aa12.32□□□□□ -0.44
UBE3A-220ENST00000630424 NOTCH3Q9UM47 2321 aa12.32□□□□□ -0.44
UBE3A-220ENST00000630424 IGKV1-8A0A0C4DH67 115 aa12.32□□□□□ -0.44
UBE3A-220ENST00000630424 FAM87AP0C7U9 286 aa12.32□□□□□ -0.44
UBE3A-220ENST00000630424 SUMO1P63165 101 aaKnown RBP12.32□□□□□ -0.44
UBE3A-220ENST00000630424 IL24Q13007 206 aa12.32□□□□□ -0.44
UBE3A-220ENST00000630424 ADAT3Q96EY9 351 aaPredicted RBP12.32□□□□□ -0.44
UBE3A-220ENST00000630424 PIMREGQ9BSJ6 248 aa12.32□□□□□ -0.44
UBE3A-220ENST00000630424 ZNF426Q9BUY5 554 aa12.32□□□□□ -0.44
UBE3A-220ENST00000630424 TMEM167BQ9NRX6 74 aa12.32□□□□□ -0.44
UBE3A-220ENST00000630424 ZNF638Q14966 1978 aaKnown RBP12.31□□□□□ -0.44
UBE3A-220ENST00000630424 NPY1RP25929 384 aa12.31□□□□□ -0.44
UBE3A-220ENST00000630424 ST3GAL2Q16842 350 aa12.31□□□□□ -0.44
UBE3A-220ENST00000630424 ZNF826PQ6ZT77 177 aa12.31□□□□□ -0.44
UBE3A-220ENST00000630424 PGLYRP3Q96LB9 341 aa12.31□□□□□ -0.44
UBE3A-220ENST00000630424 SRD5A3Q9H8P0 318 aa12.31□□□□□ -0.44
UBE3A-220ENST00000630424 SLC2A9Q9NRM0 540 aa12.31□□□□□ -0.44
UBE3A-220ENST00000630424 TRAV8-7A0A075B6U6 113 aa12.31□□□□□ -0.44
UBE3A-220ENST00000630424 GAPDHP04406 335 aaKnown RBP12.31□□□□□ -0.44
UBE3A-220ENST00000630424 OR5AL1P0C617 328 aa12.31□□□□□ -0.44
UBE3A-220ENST00000630424 FAM106CPP0CH98 169 aa12.31□□□□□ -0.44
UBE3A-220ENST00000630424 IL11P20809 199 aa12.31□□□□□ -0.44
UBE3A-220ENST00000630424 NHLH1Q02575 133 aa12.31□□□□□ -0.44
UBE3A-220ENST00000630424 NHLH2Q02577 135 aa12.31□□□□□ -0.44
UBE3A-220ENST00000630424 PILRAQ9UKJ1 303 aa12.31□□□□□ -0.44
UBE3A-220ENST00000630424 TRAPPC1Q9Y5R8 145 aa12.31□□□□□ -0.44
UBE3A-220ENST00000630424 VSIG8P0DPA2 414 aa12.31□□□□□ -0.44
UBE3A-220ENST00000630424 PRSS54Q6PEW0 395 aa12.31□□□□□ -0.44
UBE3A-220ENST00000630424 FDCSPQ8NFU4 85 aa12.31□□□□□ -0.44
UBE3A-220ENST00000630424 KIAA1324LA8MWY0 1029 aaPredicted RBP12.31□□□□□ -0.44
UBE3A-220ENST00000630424 SURF2Q15527 256 aaPredicted RBP12.31□□□□□ -0.44
UBE3A-220ENST00000630424 ANKRD55Q3KP44 614 aa12.31□□□□□ -0.44
UBE3A-220ENST00000630424 CLEC9AQ6UXN8 241 aa12.31□□□□□ -0.44
UBE3A-220ENST00000630424 ZNF66Q6ZN08 573 aa12.31□□□□□ -0.44
UBE3A-220ENST00000630424 ZBTB44Q8NCP5 570 aa12.31□□□□□ -0.44
UBE3A-220ENST00000630424 LOC101059948A0A1B0GTJ6 334 aa12.3□□□□□ -0.44
UBE3A-220ENST00000630424 RAB29O14966 203 aa12.3□□□□□ -0.44
UBE3A-220ENST00000630424 SCGB1C2P0DMR2 95 aa12.3□□□□□ -0.44
UBE3A-220ENST00000630424 TMEM33P57088 247 aa12.3□□□□□ -0.44
UBE3A-220ENST00000630424 CLEC18BQ6UXF7 455 aa12.3□□□□□ -0.44
UBE3A-220ENST00000630424 COMMD1Q8N668 190 aa12.3□□□□□ -0.44
UBE3A-220ENST00000630424 FOXJ2Q9P0K8 574 aa12.3□□□□□ -0.44
UBE3A-220ENST00000630424 ICMTO60725 284 aa12.3□□□□□ -0.44
UBE3A-220ENST00000630424 CSN3P07498 182 aa12.3□□□□□ -0.44
UBE3A-220ENST00000630424 POLR2AP24928 1970 aaKnown RBP12.3□□□□□ -0.44
UBE3A-220ENST00000630424 ARF6P62330 175 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms