RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 SERPINA12Q8IW75 414 aa12.18□□□□□ -0.46
PDLIM3-213ENST00000629667 TMEM104Q8NE00 496 aa12.18□□□□□ -0.46
PDLIM3-213ENST00000629667 OR5D14Q8NGL3 314 aa12.18□□□□□ -0.46
PDLIM3-213ENST00000629667 RTN4IP1Q8WWV3 396 aaPredicted RBP12.18□□□□□ -0.46
PDLIM3-213ENST00000629667 UBE2E2Q96LR5 201 aa12.18□□□□□ -0.46
PDLIM3-213ENST00000629667 ISYNA1Q9NPH2 558 aa12.18□□□□□ -0.46
PDLIM3-213ENST00000629667 POMPQ9Y244 141 aa12.18□□□□□ -0.46
PDLIM3-213ENST00000629667 DNAH1Q9P2D7 4330 aa12.17□□□□□ -0.46
PDLIM3-213ENST00000629667 SDCBPO00560 298 aaPredicted RBP12.17□□□□□ -0.46
PDLIM3-213ENST00000629667 SLC16A6O15403 523 aa12.17□□□□□ -0.46
PDLIM3-213ENST00000629667 ATP8B1O43520 1251 aa12.17□□□□□ -0.46
PDLIM3-213ENST00000629667 IGF1P05019 195 aa12.17□□□□□ -0.46
PDLIM3-213ENST00000629667 POLR2IP36954 125 aaKnown RBP12.17□□□□□ -0.46
PDLIM3-213ENST00000629667 PIGYQ3MUY2 71 aa12.17□□□□□ -0.46
PDLIM3-213ENST00000629667 LPCAT4Q643R3 524 aa12.17□□□□□ -0.46
PDLIM3-213ENST00000629667 ZFAND6Q6FIF0 208 aa12.17□□□□□ -0.46
PDLIM3-213ENST00000629667 FAM71E2Q8N5Q1 922 aa12.17□□□□□ -0.46
PDLIM3-213ENST00000629667 LINC00311Q8N616 119 aa12.17□□□□□ -0.46
PDLIM3-213ENST00000629667 CCDC197Q8NCU1 140 aa12.17□□□□□ -0.46
PDLIM3-213ENST00000629667 PXT1Q8NFP0 134 aa12.17□□□□□ -0.46
PDLIM3-213ENST00000629667 CPNE2Q96FN4 548 aaPredicted RBP12.17□□□□□ -0.46
PDLIM3-213ENST00000629667 CITED4Q96RK1 184 aa12.17□□□□□ -0.46
PDLIM3-213ENST00000629667 GPER1Q99527 375 aa12.17□□□□□ -0.46
PDLIM3-213ENST00000629667 CIB1Q99828 191 aa12.17□□□□□ -0.46
PDLIM3-213ENST00000629667 GNB4Q9HAV0 340 aa12.17□□□□□ -0.46
PDLIM3-213ENST00000629667 OR4C45A6NMZ5 311 aa12.16□□□□□ -0.46
PDLIM3-213ENST00000629667 ZNF736B4DX44 427 aaPredicted RBP12.16□□□□□ -0.46
PDLIM3-213ENST00000629667 J3QLW9 94 aa12.16□□□□□ -0.46
PDLIM3-213ENST00000629667 OVOL1O14753 267 aa12.16□□□□□ -0.46
PDLIM3-213ENST00000629667 GYG2O15488 501 aa12.16□□□□□ -0.46
PDLIM3-213ENST00000629667 ZNF19P17023 458 aa12.16□□□□□ -0.46
PDLIM3-213ENST00000629667 F2RL1P55085 397 aa12.16□□□□□ -0.46
PDLIM3-213ENST00000629667 ALKBH1Q13686 389 aaKnown RBP12.16□□□□□ -0.46
PDLIM3-213ENST00000629667 RSU1Q15404 277 aa12.16□□□□□ -0.46
PDLIM3-213ENST00000629667 ATP6AP1Q15904 470 aa12.16□□□□□ -0.46
PDLIM3-213ENST00000629667 DNAL1Q4LDG9 190 aa12.16□□□□□ -0.46
PDLIM3-213ENST00000629667 ASPHD1Q5U4P2 390 aa12.16□□□□□ -0.46
PDLIM3-213ENST00000629667 SATL1Q86VE3 508 aa12.16□□□□□ -0.46
PDLIM3-213ENST00000629667 C8orf31Q8N9H6 132 aa12.16□□□□□ -0.46
PDLIM3-213ENST00000629667 SUMF2Q8NBJ7 301 aa12.16□□□□□ -0.46
PDLIM3-213ENST00000629667 OR52M1Q8NGK5 317 aa12.16□□□□□ -0.46
PDLIM3-213ENST00000629667 OR10K1Q8NGX5 313 aa12.16□□□□□ -0.46
PDLIM3-213ENST00000629667 MYOZ3Q8TDC0 251 aa12.16□□□□□ -0.46
PDLIM3-213ENST00000629667 TNFAIP8L1Q8WVP5 186 aa12.16□□□□□ -0.46
PDLIM3-213ENST00000629667 ARL11Q969Q4 196 aa12.16□□□□□ -0.46
PDLIM3-213ENST00000629667 ST6GALNAC6Q969X2 333 aa12.16□□□□□ -0.46
PDLIM3-213ENST00000629667 OR5B12Q96R08 314 aa12.16□□□□□ -0.46
PDLIM3-213ENST00000629667 CHCHD6Q9BRQ6 235 aa12.16□□□□□ -0.46
PDLIM3-213ENST00000629667 DPCDQ9BVM2 203 aaPredicted RBP12.16□□□□□ -0.46
PDLIM3-213ENST00000629667 FAM192AQ9GZU8 254 aa12.16□□□□□ -0.46
PDLIM3-213ENST00000629667 GABARAPL1Q9H0R8 117 aa12.16□□□□□ -0.46
PDLIM3-213ENST00000629667 CHCHD3Q9NX63 227 aaKnown RBP12.16□□□□□ -0.46
PDLIM3-213ENST00000629667 ZNF107Q9UII5 783 aaPredicted RBP12.16□□□□□ -0.46
PDLIM3-213ENST00000629667 ZNF580Q9UK33 172 aa12.16□□□□□ -0.46
PDLIM3-213ENST00000629667 VSIG4Q9Y279 399 aa12.16□□□□□ -0.46
PDLIM3-213ENST00000629667 TMEM30CPA0ZSE6 113 aa12.15□□□□□ -0.46
PDLIM3-213ENST00000629667 I3L521 148 aa12.15□□□□□ -0.46
PDLIM3-213ENST00000629667 MAGEB3O15480 346 aa12.15□□□□□ -0.46
PDLIM3-213ENST00000629667 TXNL1O43396 289 aa12.15□□□□□ -0.46
PDLIM3-213ENST00000629667 SAP30O75446 220 aa12.15□□□□□ -0.46
PDLIM3-213ENST00000629667 HTR3BO95264 441 aa12.15□□□□□ -0.46
PDLIM3-213ENST00000629667 GP9P14770 177 aa12.15□□□□□ -0.46
PDLIM3-213ENST00000629667 SPNP16150 400 aa12.15□□□□□ -0.46
PDLIM3-213ENST00000629667 RUNX1Q01196 453 aa12.15□□□□□ -0.46
PDLIM3-213ENST00000629667 FAM53AQ6NSI3 398 aaPredicted RBP12.15□□□□□ -0.46
PDLIM3-213ENST00000629667 PARP16Q8N5Y8 322 aa12.15□□□□□ -0.46
PDLIM3-213ENST00000629667 ZNF491Q8N8L2 437 aa12.15□□□□□ -0.46
PDLIM3-213ENST00000629667 UBALD1Q8TB05 177 aa12.15□□□□□ -0.46
PDLIM3-213ENST00000629667 DCUN1D4Q92564 292 aa12.15□□□□□ -0.46
PDLIM3-213ENST00000629667 PELI1Q96FA3 418 aa12.15□□□□□ -0.46
PDLIM3-213ENST00000629667 C4orf36Q96KX1 117 aa12.15□□□□□ -0.46
PDLIM3-213ENST00000629667 KLK15Q9H2R5 256 aa12.15□□□□□ -0.46
PDLIM3-213ENST00000629667 RIBC2Q9H4K1 309 aa12.15□□□□□ -0.46
PDLIM3-213ENST00000629667 GFOD1Q9NXC2 390 aa12.15□□□□□ -0.46
PDLIM3-213ENST00000629667 IGHV3-43A0A0B4J1X8 118 aa12.14□□□□□ -0.47
PDLIM3-213ENST00000629667 C15orf65H3BRN8 121 aa12.14□□□□□ -0.47
PDLIM3-213ENST00000629667 GABRPO00591 440 aa12.14□□□□□ -0.47
PDLIM3-213ENST00000629667 OR7C1O76099 320 aaPredicted RBP12.14□□□□□ -0.47
PDLIM3-213ENST00000629667 RPSAP08865 295 aaKnown RBP12.14□□□□□ -0.47
PDLIM3-213ENST00000629667 IGHV3-43DP0DP04 118 aa12.14□□□□□ -0.47
PDLIM3-213ENST00000629667 SLC2A2P11168 524 aaPredicted RBP12.14□□□□□ -0.47
PDLIM3-213ENST00000629667 MYF6P23409 242 aa12.14□□□□□ -0.47
PDLIM3-213ENST00000629667 GNB1P62873 340 aa12.14□□□□□ -0.47
PDLIM3-213ENST00000629667 GABPB1Q06547 395 aaPredicted RBP12.14□□□□□ -0.47
PDLIM3-213ENST00000629667 CCDC107Q8WV48 283 aa12.14□□□□□ -0.47
PDLIM3-213ENST00000629667 RBMXL1Q96E39 390 aaKnown RBP12.14□□□□□ -0.47
PDLIM3-213ENST00000629667 GHITMQ9H3K2 345 aa12.14□□□□□ -0.47
PDLIM3-213ENST00000629667 DHDHQ9UQ10 334 aa12.14□□□□□ -0.47
PDLIM3-213ENST00000629667 ST3GAL6Q9Y274 331 aa12.14□□□□□ -0.47
PDLIM3-213ENST00000629667 WSB1Q9Y6I7 421 aa12.14□□□□□ -0.47
PDLIM3-213ENST00000629667 CSMD3Q7Z407 3707 aa12.13□□□□□ -0.47
PDLIM3-213ENST00000629667 STARD9Q9P2P6 4700 aa12.13□□□□□ -0.47
PDLIM3-213ENST00000629667 J3QRE1 110 aa12.13□□□□□ -0.47
PDLIM3-213ENST00000629667 RAB3AP20336 220 aa12.13□□□□□ -0.47
PDLIM3-213ENST00000629667 FASP25445 335 aa12.13□□□□□ -0.47
PDLIM3-213ENST00000629667 PPIFP30405 207 aaKnown RBP12.13□□□□□ -0.47
PDLIM3-213ENST00000629667 KIAA0141Q14154 515 aaPredicted RBP12.13□□□□□ -0.47
PDLIM3-213ENST00000629667 MMDQ15546 238 aa12.13□□□□□ -0.47
PDLIM3-213ENST00000629667 ACBD7Q8N6N7 88 aa12.13□□□□□ -0.47
PDLIM3-213ENST00000629667 OR6Q1Q8NGQ2 317 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms