RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 TMEM127O75204 238 aa16.53■□□□□ 0.24
PTCD3-220ENST00000627371 VENTXO95231 258 aa16.53■□□□□ 0.24
PTCD3-220ENST00000627371 GZMHP20718 246 aa16.53■□□□□ 0.24
PTCD3-220ENST00000627371 GDNFP39905 211 aa16.53■□□□□ 0.24
PTCD3-220ENST00000627371 TMEM50BP56557 158 aa16.53■□□□□ 0.24
PTCD3-220ENST00000627371 SCAND1P57086 179 aa16.53■□□□□ 0.24
PTCD3-220ENST00000627371 NCS1P62166 190 aa16.53■□□□□ 0.24
PTCD3-220ENST00000627371 ZNF626Q68DY1 528 aa16.53■□□□□ 0.24
PTCD3-220ENST00000627371 RTN4RL2Q86UN3 420 aa16.53■□□□□ 0.24
PTCD3-220ENST00000627371 CROCCP3Q8IVE0 287 aa16.53■□□□□ 0.24
PTCD3-220ENST00000627371 OR4K15Q8NH41 348 aa16.53■□□□□ 0.24
PTCD3-220ENST00000627371 MRPL30Q8TCC3 161 aaKnown RBP16.53■□□□□ 0.24
PTCD3-220ENST00000627371 KIRREL1Q96J84 757 aa16.53■□□□□ 0.24
PTCD3-220ENST00000627371 TRAPPC2LQ9UL33 140 aa16.53■□□□□ 0.24
PTCD3-220ENST00000627371 A0A087X0M5 115 aa16.52■□□□□ 0.24
PTCD3-220ENST00000627371 A0A1B0GX30 115 aa16.52■□□□□ 0.24
PTCD3-220ENST00000627371 ODF3BA8MYP8 253 aa16.52■□□□□ 0.24
PTCD3-220ENST00000627371 ORC5O43913 435 aa16.52■□□□□ 0.24
PTCD3-220ENST00000627371 SNRPBP14678 240 aaKnown RBP16.52■□□□□ 0.24
PTCD3-220ENST00000627371 RPS19P39019 145 aaKnown RBP16.52■□□□□ 0.24
PTCD3-220ENST00000627371 VBP1P61758 197 aa16.52■□□□□ 0.24
PTCD3-220ENST00000627371 IDNKQ5T6J7 187 aa16.52■□□□□ 0.24
PTCD3-220ENST00000627371 GPR107Q5VW38 600 aa16.52■□□□□ 0.24
PTCD3-220ENST00000627371 BAIAP2L2Q6UXY1 529 aa16.52■□□□□ 0.24
PTCD3-220ENST00000627371 Q6ZTK2 550 aa16.52■□□□□ 0.24
PTCD3-220ENST00000627371 LGALS14Q8TCE9 139 aa16.52■□□□□ 0.24
PTCD3-220ENST00000627371 ARHGAP5-AS1Q96IT6 56 aa16.52■□□□□ 0.24
PTCD3-220ENST00000627371 CLEC7AQ9BXN2 247 aa16.52■□□□□ 0.24
PTCD3-220ENST00000627371 NAA50Q9GZZ1 169 aaKnown RBP16.52■□□□□ 0.24
PTCD3-220ENST00000627371 ESM1Q9NQ30 184 aa16.52■□□□□ 0.24
PTCD3-220ENST00000627371 IDI2-AS1Q9NZ38 188 aa16.52■□□□□ 0.24
PTCD3-220ENST00000627371 FAM96BQ9Y3D0 163 aa16.52■□□□□ 0.24
PTCD3-220ENST00000627371 METTL21EPA6NDL7 271 aa16.51■□□□□ 0.23
PTCD3-220ENST00000627371 C15orf65H3BRN8 121 aa16.51■□□□□ 0.23
PTCD3-220ENST00000627371 PAHP00439 452 aa16.51■□□□□ 0.23
PTCD3-220ENST00000627371 ARG1P05089 322 aa16.51■□□□□ 0.23
PTCD3-220ENST00000627371 FBP1P09467 338 aa16.51■□□□□ 0.23
PTCD3-220ENST00000627371 CD34P28906 385 aa16.51■□□□□ 0.23
PTCD3-220ENST00000627371 SERPINB10P48595 397 aa16.51■□□□□ 0.23
PTCD3-220ENST00000627371 CTF1Q16619 201 aa16.51■□□□□ 0.23
PTCD3-220ENST00000627371 MOGAT2Q3SYC2 334 aa16.51■□□□□ 0.23
PTCD3-220ENST00000627371 PLAC9Q5JTB6 97 aa16.51■□□□□ 0.23
PTCD3-220ENST00000627371 C6orf183Q5T699 404 aa16.51■□□□□ 0.23
PTCD3-220ENST00000627371 TRAT1Q6PIZ9 186 aa16.51■□□□□ 0.23
PTCD3-220ENST00000627371 Q6YL49 198 aa16.51■□□□□ 0.23
PTCD3-220ENST00000627371 ZDHHC22Q8N966 263 aa16.51■□□□□ 0.23
PTCD3-220ENST00000627371 OR10A7Q8NGE5 316 aa16.51■□□□□ 0.23
PTCD3-220ENST00000627371 ZDHHC16Q969W1 377 aa16.51■□□□□ 0.23
PTCD3-220ENST00000627371 PECRQ9BY49 303 aa16.51■□□□□ 0.23
PTCD3-220ENST00000627371 MBNL3Q9NUK0 354 aaKnown RBP16.51■□□□□ 0.23
PTCD3-220ENST00000627371 ETV7Q9Y603 341 aa16.51■□□□□ 0.23
PTCD3-220ENST00000627371 RAB27BO00194 218 aa16.5■□□□□ 0.23
PTCD3-220ENST00000627371 RCC1P18754 421 aaPredicted RBP16.5■□□□□ 0.23
PTCD3-220ENST00000627371 RPL5P46777 297 aaKnown RBP16.5■□□□□ 0.23
PTCD3-220ENST00000627371 LGALS4P56470 323 aa16.5■□□□□ 0.23
PTCD3-220ENST00000627371 SRSF2Q01130 221 aaKnown RBP16.5■□□□□ 0.23
PTCD3-220ENST00000627371 BAMBIQ13145 260 aa16.5■□□□□ 0.23
PTCD3-220ENST00000627371 LDLRAD3Q86YD5 345 aa16.5■□□□□ 0.23
PTCD3-220ENST00000627371 ABHD12Q8N2K0 398 aa16.5■□□□□ 0.23
PTCD3-220ENST00000627371 OR10R2Q8NGX6 335 aa16.5■□□□□ 0.23
PTCD3-220ENST00000627371 RFESDQ8TAC1 157 aa16.5■□□□□ 0.23
PTCD3-220ENST00000627371 ARL11Q969Q4 196 aa16.5■□□□□ 0.23
PTCD3-220ENST00000627371 SLC25A46Q96AG3 418 aa16.5■□□□□ 0.23
PTCD3-220ENST00000627371 RAB3CQ96E17 227 aa16.5■□□□□ 0.23
PTCD3-220ENST00000627371 AJUBAQ96IF1 538 aa16.5■□□□□ 0.23
PTCD3-220ENST00000627371 ATG5Q9H1Y0 275 aa16.5■□□□□ 0.23
PTCD3-220ENST00000627371 AK3Q9UIJ7 227 aa16.5■□□□□ 0.23
PTCD3-220ENST00000627371 TBL2Q9Y4P3 447 aaKnown RBP16.5■□□□□ 0.23
PTCD3-220ENST00000627371 FAM172BPA6NC97 362 aa16.49■□□□□ 0.23
PTCD3-220ENST00000627371 DNAJC9-AS1A6NH13 148 aa16.49■□□□□ 0.23
PTCD3-220ENST00000627371 C12orf77C9JDV5 145 aa16.49■□□□□ 0.23
PTCD3-220ENST00000627371 NAPSAO96009 420 aa16.49■□□□□ 0.23
PTCD3-220ENST00000627371 MELTFP08582 738 aa16.49■□□□□ 0.23
PTCD3-220ENST00000627371 NFYBP25208 207 aa16.49■□□□□ 0.23
PTCD3-220ENST00000627371 DYNC1I2Q13409 638 aaKnown RBP16.49■□□□□ 0.23
PTCD3-220ENST00000627371 ZNF554Q86TJ5 538 aa16.49■□□□□ 0.23
PTCD3-220ENST00000627371 C17orf50Q8WW18 174 aa16.49■□□□□ 0.23
PTCD3-220ENST00000627371 RIMS4Q9H426 269 aaPredicted RBP16.49■□□□□ 0.23
PTCD3-220ENST00000627371 ZNF286AQ9HBT8 521 aa16.49■□□□□ 0.23
PTCD3-220ENST00000627371 RAB9BQ9NP90 201 aa16.49■□□□□ 0.23
PTCD3-220ENST00000627371 ABRACLQ9P1F3 81 aa16.49■□□□□ 0.23
PTCD3-220ENST00000627371 ZNRD1Q9P1U0 126 aa16.49■□□□□ 0.23
PTCD3-220ENST00000627371 SCOCQ9UIL1 159 aa16.49■□□□□ 0.23
PTCD3-220ENST00000627371 TRBV6-6A0A0A6YYG2 114 aa16.48■□□□□ 0.23
PTCD3-220ENST00000627371 CLDN34H7C241 214 aa16.48■□□□□ 0.23
PTCD3-220ENST00000627371 LTC4SQ16873 150 aa16.48■□□□□ 0.23
PTCD3-220ENST00000627371 BEND2Q8NDZ0 799 aa16.48■□□□□ 0.23
PTCD3-220ENST00000627371 OR5H6Q8NGV6 325 aa16.48■□□□□ 0.23
PTCD3-220ENST00000627371 ZNF596Q8TC21 504 aa16.48■□□□□ 0.23
PTCD3-220ENST00000627371 ZMAT3Q9HA38 289 aaKnown RBP16.48■□□□□ 0.23
PTCD3-220ENST00000627371 CHMP1AQ9HD42 196 aaPredicted RBP16.48■□□□□ 0.23
PTCD3-220ENST00000627371 RHBDL2Q9NX52 303 aa16.48■□□□□ 0.23
PTCD3-220ENST00000627371 SPATA2Q9UM82 520 aa16.48■□□□□ 0.23
PTCD3-220ENST00000627371 KCNK7Q9Y2U2 307 aa16.48■□□□□ 0.23
PTCD3-220ENST00000627371 TRIM77I1YAP6 450 aa16.47■□□□□ 0.23
PTCD3-220ENST00000627371 F2RL2O00254 374 aa16.47■□□□□ 0.23
PTCD3-220ENST00000627371 MFNGO00587 321 aa16.47■□□□□ 0.23
PTCD3-220ENST00000627371 SPINT2O43291 252 aa16.47■□□□□ 0.23
PTCD3-220ENST00000627371 HOXA3O43365 443 aaPredicted RBP16.47■□□□□ 0.23
PTCD3-220ENST00000627371 SCGNO76038 276 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms