RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 CORO2AQ92828 525 aa12.06□□□□□ -0.48
PNKP-221ENST00000627317 CYYR1Q96J86 154 aa12.06□□□□□ -0.48
PNKP-221ENST00000627317 C19orf24Q9BVV8 132 aa12.06□□□□□ -0.48
PNKP-221ENST00000627317 TAS2R3Q9NYW6 316 aa12.06□□□□□ -0.48
PNKP-221ENST00000627317 AK3Q9UIJ7 227 aa12.06□□□□□ -0.48
PNKP-221ENST00000627317 TRAPPC2LQ9UL33 140 aa12.06□□□□□ -0.48
PNKP-221ENST00000627317 TRAV39A0A0B4J263 110 aa12.05□□□□□ -0.48
PNKP-221ENST00000627317 C17orf98A8MV24 154 aa12.05□□□□□ -0.48
PNKP-221ENST00000627317 VENTXO95231 258 aa12.05□□□□□ -0.48
PNKP-221ENST00000627317 CD3GP09693 182 aa12.05□□□□□ -0.48
PNKP-221ENST00000627317 GNB3P16520 340 aa12.05□□□□□ -0.48
PNKP-221ENST00000627317 PRTN3P24158 256 aa12.05□□□□□ -0.48
PNKP-221ENST00000627317 ARL6IP1Q15041 203 aa12.05□□□□□ -0.48
PNKP-221ENST00000627317 KLF17Q5JT82 389 aaPredicted RBP12.05□□□□□ -0.48
PNKP-221ENST00000627317 PLAC9Q5JTB6 97 aa12.05□□□□□ -0.48
PNKP-221ENST00000627317 C6orf183Q5T699 404 aa12.05□□□□□ -0.48
PNKP-221ENST00000627317 PRAMEF5Q5TYX0 476 aa12.05□□□□□ -0.48
PNKP-221ENST00000627317 ZNF782Q6ZMW2 699 aaPredicted RBP12.05□□□□□ -0.48
PNKP-221ENST00000627317 GAPTQ8N292 157 aa12.05□□□□□ -0.48
PNKP-221ENST00000627317 MRPL30Q8TCC3 161 aaKnown RBP12.05□□□□□ -0.48
PNKP-221ENST00000627317 DYNC2LI1Q8TCX1 351 aa12.05□□□□□ -0.48
PNKP-221ENST00000627317 LHX4Q969G2 390 aa12.05□□□□□ -0.48
PNKP-221ENST00000627317 C12orf4Q9NQ89 552 aa12.05□□□□□ -0.48
PNKP-221ENST00000627317 DIABLOQ9NR28 239 aa12.05□□□□□ -0.48
PNKP-221ENST00000627317 CALYQ9NYX4 217 aa12.05□□□□□ -0.48
PNKP-221ENST00000627317 NDUFA13Q9P0J0 144 aa12.05□□□□□ -0.48
PNKP-221ENST00000627317 IGHV3OR16-10A0A075B7F0 116 aa12.04□□□□□ -0.48
PNKP-221ENST00000627317 A0A0A6YYH2 397 aa12.04□□□□□ -0.48
PNKP-221ENST00000627317 A0A0A6YYJ9 748 aa12.04□□□□□ -0.48
PNKP-221ENST00000627317 KBTBD11-OT1A0A1B0GTJ5 212 aa12.04□□□□□ -0.48
PNKP-221ENST00000627317 A6NJ64 397 aa12.04□□□□□ -0.48
PNKP-221ENST00000627317 SERPINE3A8MV23 424 aa12.04□□□□□ -0.48
PNKP-221ENST00000627317 MFNGO00587 321 aa12.04□□□□□ -0.48
PNKP-221ENST00000627317 CDK2P24941 298 aa12.04□□□□□ -0.48
PNKP-221ENST00000627317 DLX1P56177 255 aa12.04□□□□□ -0.48
PNKP-221ENST00000627317 PRB3Q04118 309 aaPredicted RBP12.04□□□□□ -0.48
PNKP-221ENST00000627317 KLRD1Q13241 179 aa12.04□□□□□ -0.48
PNKP-221ENST00000627317 ARFRP1Q13795 201 aa12.04□□□□□ -0.48
PNKP-221ENST00000627317 TRAT1Q6PIZ9 186 aa12.04□□□□□ -0.48
PNKP-221ENST00000627317 MOB1BQ7L9L4 216 aa12.04□□□□□ -0.48
PNKP-221ENST00000627317 SETD6Q8TBK2 473 aa12.04□□□□□ -0.48
PNKP-221ENST00000627317 S100A16Q96FQ6 103 aaKnown RBP12.04□□□□□ -0.48
PNKP-221ENST00000627317 CMSS1Q9BQ75 279 aaKnown RBP12.04□□□□□ -0.48
PNKP-221ENST00000627317 ABCG5Q9H222 651 aa12.04□□□□□ -0.48
PNKP-221ENST00000627317 RIMS4Q9H426 269 aaPredicted RBP12.04□□□□□ -0.48
PNKP-221ENST00000627317 HEXA-AS1Q9H8Q6 139 aa12.04□□□□□ -0.48
PNKP-221ENST00000627317 UNKLQ9H9P5 680 aaKnown RBP12.04□□□□□ -0.48
PNKP-221ENST00000627317 ZMAT3Q9HA38 289 aaKnown RBP12.04□□□□□ -0.48
PNKP-221ENST00000627317 RAB9BQ9NP90 201 aa12.04□□□□□ -0.48
PNKP-221ENST00000627317 SESN1Q9Y6P5 492 aa12.04□□□□□ -0.48
PNKP-221ENST00000627317 DPPA5A6NC42 116 aa12.03□□□□□ -0.48
PNKP-221ENST00000627317 NAPSAO96009 420 aa12.03□□□□□ -0.48
PNKP-221ENST00000627317 APOA1P02647 267 aa12.03□□□□□ -0.48
PNKP-221ENST00000627317 IGHV1-8P0DP01 117 aa12.03□□□□□ -0.48
PNKP-221ENST00000627317 IGHV4-38-2P0DP08 117 aa12.03□□□□□ -0.48
PNKP-221ENST00000627317 GZMHP20718 246 aa12.03□□□□□ -0.48
PNKP-221ENST00000627317 COX7A1P24310 79 aa12.03□□□□□ -0.48
PNKP-221ENST00000627317 SSTR5P35346 364 aa12.03□□□□□ -0.48
PNKP-221ENST00000627317 HILS1P60008 231 aa12.03□□□□□ -0.48
PNKP-221ENST00000627317 GUCA2AQ02747 115 aa12.03□□□□□ -0.48
PNKP-221ENST00000627317 SCGB2A2Q13296 93 aa12.03□□□□□ -0.48
PNKP-221ENST00000627317 CDNFQ49AH0 187 aa12.03□□□□□ -0.48
PNKP-221ENST00000627317 OLFML2AQ68BL7 652 aa12.03□□□□□ -0.48
PNKP-221ENST00000627317 HEPN1Q6WQI6 88 aa12.03□□□□□ -0.48
PNKP-221ENST00000627317 PDZD9Q8IXQ8 264 aa12.03□□□□□ -0.48
PNKP-221ENST00000627317 C11orf42Q8N5U0 333 aa12.03□□□□□ -0.48
PNKP-221ENST00000627317 ARL11Q969Q4 196 aa12.03□□□□□ -0.48
PNKP-221ENST00000627317 HDHD3Q9BSH5 251 aaPredicted RBP12.03□□□□□ -0.48
PNKP-221ENST00000627317 DCUN1D5Q9BTE7 237 aa12.03□□□□□ -0.48
PNKP-221ENST00000627317 KCNIP1Q9NZI2 227 aa12.03□□□□□ -0.48
PNKP-221ENST00000627317 NUP50Q9UKX7 468 aa12.03□□□□□ -0.48
PNKP-221ENST00000627317 TRAV18A0A075B6X5 111 aa12.02□□□□□ -0.49
PNKP-221ENST00000627317 IGHV1-69DA0A0B4J2H0 117 aa12.02□□□□□ -0.49
PNKP-221ENST00000627317 CENPVL3A0A0U1RRI6 287 aa12.02□□□□□ -0.49
PNKP-221ENST00000627317 TMEM235A6NFC5 223 aa12.02□□□□□ -0.49
PNKP-221ENST00000627317 FAM25AB3EWG3 89 aa12.02□□□□□ -0.49
PNKP-221ENST00000627317 FAM25CB3EWG5 89 aa12.02□□□□□ -0.49
PNKP-221ENST00000627317 FAM25GB3EWG6 89 aa12.02□□□□□ -0.49
PNKP-221ENST00000627317 SPINT2O43291 252 aa12.02□□□□□ -0.49
PNKP-221ENST00000627317 ORC5O43913 435 aa12.02□□□□□ -0.49
PNKP-221ENST00000627317 HPGDSO60760 199 aa12.02□□□□□ -0.49
PNKP-221ENST00000627317 IGHV1-69P01742 117 aa12.02□□□□□ -0.49
PNKP-221ENST00000627317 EIF4EP06730 217 aaKnown RBP12.02□□□□□ -0.49
PNKP-221ENST00000627317 GSTP1P09211 210 aaKnown RBP12.02□□□□□ -0.49
PNKP-221ENST00000627317 RCC1P18754 421 aaPredicted RBP12.02□□□□□ -0.49
PNKP-221ENST00000627317 OMGP23515 440 aa12.02□□□□□ -0.49
PNKP-221ENST00000627317 TALDO1P37837 337 aa12.02□□□□□ -0.49
PNKP-221ENST00000627317 GNG2P59768 71 aa12.02□□□□□ -0.49
PNKP-221ENST00000627317 LTC4SQ16873 150 aa12.02□□□□□ -0.49
PNKP-221ENST00000627317 C17orf58Q2M2W7 97 aa12.02□□□□□ -0.49
PNKP-221ENST00000627317 TMEM69Q5SWH9 247 aa12.02□□□□□ -0.49
PNKP-221ENST00000627317 OR52W1Q6IF63 320 aa12.02□□□□□ -0.49
PNKP-221ENST00000627317 PRR18Q8N4B5 295 aa12.02□□□□□ -0.49
PNKP-221ENST00000627317 OR13D1Q8NGV5 346 aa12.02□□□□□ -0.49
PNKP-221ENST00000627317 RFESDQ8TAC1 157 aa12.02□□□□□ -0.49
PNKP-221ENST00000627317 TNFRSF14Q92956 283 aa12.02□□□□□ -0.49
PNKP-221ENST00000627317 CMTM3Q96MX0 182 aa12.02□□□□□ -0.49
PNKP-221ENST00000627317 SLC6A7Q99884 636 aa12.02□□□□□ -0.49
PNKP-221ENST00000627317 SUCNR1Q9BXA5 334 aa12.02□□□□□ -0.49
PNKP-221ENST00000627317 MS4A7Q9GZW8 240 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms