RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 FKBP14Q9NWM8 211 aa8.66□□□□□ -1.02
SSBP4-215ENST00000625926 MRPS28Q9Y2Q9 187 aaKnown RBP8.66□□□□□ -1.02
SSBP4-215ENST00000625926 FAM90A18PA6NE21 464 aa8.65□□□□□ -1.02
SSBP4-215ENST00000625926 FAM90A16PA6NEW6 464 aa8.65□□□□□ -1.02
SSBP4-215ENST00000625926 FAM90A20PA6NIJ5 464 aa8.65□□□□□ -1.02
SSBP4-215ENST00000625926 FAM90A9PA6NNJ1 464 aa8.65□□□□□ -1.02
SSBP4-215ENST00000625926 FAM90A12PA8MX19 464 aa8.65□□□□□ -1.02
SSBP4-215ENST00000625926 FAM90A5PA8MXJ8 464 aa8.65□□□□□ -1.02
SSBP4-215ENST00000625926 MCRIP1C9JLW8 97 aa8.65□□□□□ -1.02
SSBP4-215ENST00000625926 PIN1P1O15428 100 aa8.65□□□□□ -1.02
SSBP4-215ENST00000625926 ORC5O43913 435 aa8.65□□□□□ -1.02
SSBP4-215ENST00000625926 MT-ND4P03905 459 aa8.65□□□□□ -1.02
SSBP4-215ENST00000625926 LPLP06858 475 aa8.65□□□□□ -1.02
SSBP4-215ENST00000625926 FAM90A15PP0C7V4 464 aa8.65□□□□□ -1.02
SSBP4-215ENST00000625926 FAM90A13PP0C7W8 464 aa8.65□□□□□ -1.02
SSBP4-215ENST00000625926 FAM90A14PP0C7W9 464 aa8.65□□□□□ -1.02
SSBP4-215ENST00000625926 FAM90A24PP0C7X0 464 aa8.65□□□□□ -1.02
SSBP4-215ENST00000625926 MAPK3P27361 379 aaPredicted RBP8.65□□□□□ -1.02
SSBP4-215ENST00000625926 GNG10P50151 68 aa8.65□□□□□ -1.02
SSBP4-215ENST00000625926 RAB7AP51149 207 aa8.65□□□□□ -1.02
SSBP4-215ENST00000625926 RNLSQ5VYX0 342 aa8.65□□□□□ -1.02
SSBP4-215ENST00000625926 AWAT2Q6E213 333 aa8.65□□□□□ -1.02
SSBP4-215ENST00000625926 OR4F17Q8NGA8 305 aa8.65□□□□□ -1.02
SSBP4-215ENST00000625926 OR52M1Q8NGK5 317 aa8.65□□□□□ -1.02
SSBP4-215ENST00000625926 OR10X1Q8NGY0 326 aa8.65□□□□□ -1.02
SSBP4-215ENST00000625926 CCDC107Q8WV48 283 aa8.65□□□□□ -1.02
SSBP4-215ENST00000625926 ARL11Q969Q4 196 aa8.65□□□□□ -1.02
SSBP4-215ENST00000625926 R3HDM4Q96D70 268 aa8.65□□□□□ -1.02
SSBP4-215ENST00000625926 DERL3Q96Q80 235 aa8.65□□□□□ -1.02
SSBP4-215ENST00000625926 OR4F4Q96R69 305 aa8.65□□□□□ -1.02
SSBP4-215ENST00000625926 KRTAP17-1Q9BYP8 105 aa8.65□□□□□ -1.02
SSBP4-215ENST00000625926 PTGES3LE9PB15 166 aa8.64□□□□□ -1.03
SSBP4-215ENST00000625926 C15orf65H3BRN8 121 aa8.64□□□□□ -1.03
SSBP4-215ENST00000625926 AIPO00170 330 aa8.64□□□□□ -1.03
SSBP4-215ENST00000625926 SDCBPO00560 298 aaPredicted RBP8.64□□□□□ -1.03
SSBP4-215ENST00000625926 AMY1AP04745 511 aa8.64□□□□□ -1.03
SSBP4-215ENST00000625926 AMY2AP04746 511 aa8.64□□□□□ -1.03
SSBP4-215ENST00000625926 CDK1P06493 297 aa8.64□□□□□ -1.03
SSBP4-215ENST00000625926 SNRNP70P08621 437 aaKnown RBP8.64□□□□□ -1.03
SSBP4-215ENST00000625926 CD83Q01151 205 aa8.64□□□□□ -1.03
SSBP4-215ENST00000625926 HES1Q14469 280 aa8.64□□□□□ -1.03
SSBP4-215ENST00000625926 FBLN7Q53RD9 439 aa8.64□□□□□ -1.03
SSBP4-215ENST00000625926 C6orf141Q5SZD1 244 aa8.64□□□□□ -1.03
SSBP4-215ENST00000625926 RAB12Q6IQ22 244 aa8.64□□□□□ -1.03
SSBP4-215ENST00000625926 ZNF497Q6ZNH5 498 aa8.64□□□□□ -1.03
SSBP4-215ENST00000625926 LYPD6Q86Y78 171 aa8.64□□□□□ -1.03
SSBP4-215ENST00000625926 OR8H3Q8N146 312 aa8.64□□□□□ -1.03
SSBP4-215ENST00000625926 MS4A15Q8N5U1 240 aa8.64□□□□□ -1.03
SSBP4-215ENST00000625926 DRAM1Q8N682 238 aa8.64□□□□□ -1.03
SSBP4-215ENST00000625926 NKAIN3Q8N8D7 197 aa8.64□□□□□ -1.03
SSBP4-215ENST00000625926 OR56B4Q8NH76 319 aa8.64□□□□□ -1.03
SSBP4-215ENST00000625926 MYDGFQ969H8 173 aa8.64□□□□□ -1.03
SSBP4-215ENST00000625926 MND1Q9BWT6 205 aa8.64□□□□□ -1.03
SSBP4-215ENST00000625926 SELENOIQ9C0D9 397 aa8.64□□□□□ -1.03
SSBP4-215ENST00000625926 RAB9BQ9NP90 201 aa8.64□□□□□ -1.03
SSBP4-215ENST00000625926 SCN3BQ9NY72 215 aa8.64□□□□□ -1.03
SSBP4-215ENST00000625926 RCC2Q9P258 522 aaKnown RBP8.64□□□□□ -1.03
SSBP4-215ENST00000625926 GHRLQ9UBU3 117 aa8.64□□□□□ -1.03
SSBP4-215ENST00000625926 TRAPPC2LQ9UL33 140 aa8.64□□□□□ -1.03
SSBP4-215ENST00000625926 MOB4Q9Y3A3 225 aa8.64□□□□□ -1.03
SSBP4-215ENST00000625926 TRRAPQ9Y4A5 3859 aa8.64□□□□□ -1.03
SSBP4-215ENST00000625926 A0A1W2PPE3 182 aa8.63□□□□□ -1.03
SSBP4-215ENST00000625926 A0A1W2PPI3 338 aa8.63□□□□□ -1.03
SSBP4-215ENST00000625926 FAM90A10PA6NDY2 464 aa8.63□□□□□ -1.03
SSBP4-215ENST00000625926 FAM90A7PA6NKC0 464 aa8.63□□□□□ -1.03
SSBP4-215ENST00000625926 SH2D7A6NKC9 451 aaPredicted RBP8.63□□□□□ -1.03
SSBP4-215ENST00000625926 ADARB2-AS1A8MUL3 147 aa8.63□□□□□ -1.03
SSBP4-215ENST00000625926 FAM90A23PA8MXZ1 464 aa8.63□□□□□ -1.03
SSBP4-215ENST00000625926 G3V4G9 280 aa8.63□□□□□ -1.03
SSBP4-215ENST00000625926 SPINT2O43291 252 aa8.63□□□□□ -1.03
SSBP4-215ENST00000625926 CRTAPO75718 401 aaPredicted RBP8.63□□□□□ -1.03
SSBP4-215ENST00000625926 GAPDHP04406 335 aaKnown RBP8.63□□□□□ -1.03
SSBP4-215ENST00000625926 GLAP06280 429 aa8.63□□□□□ -1.03
SSBP4-215ENST00000625926 MGMTP16455 207 aa8.63□□□□□ -1.03
SSBP4-215ENST00000625926 DIAPH2-AS1Q14236 149 aa8.63□□□□□ -1.03
SSBP4-215ENST00000625926 Q3ZCU0 254 aa8.63□□□□□ -1.03
SSBP4-215ENST00000625926 ACSM3Q53FZ2 586 aa8.63□□□□□ -1.03
SSBP4-215ENST00000625926 C9orf152Q5JTZ5 239 aa8.63□□□□□ -1.03
SSBP4-215ENST00000625926 SYT6Q5T7P8 510 aaPredicted RBP8.63□□□□□ -1.03
SSBP4-215ENST00000625926 UNQ9370/PRO34162Q6UXP9 181 aa8.63□□□□□ -1.03
SSBP4-215ENST00000625926 LINC00311Q8N616 119 aa8.63□□□□□ -1.03
SSBP4-215ENST00000625926 C8orf31Q8N9H6 132 aa8.63□□□□□ -1.03
SSBP4-215ENST00000625926 UQCC2Q9BRT2 126 aa8.63□□□□□ -1.03
SSBP4-215ENST00000625926 BANF2Q9H503 90 aa8.63□□□□□ -1.03
SSBP4-215ENST00000625926 GFOD1Q9NXC2 390 aa8.63□□□□□ -1.03
SSBP4-215ENST00000625926 ETAA1Q9NY74 926 aa8.63□□□□□ -1.03
SSBP4-215ENST00000625926 NKX1-2Q9UD57 310 aaPredicted RBP8.63□□□□□ -1.03
SSBP4-215ENST00000625926 PEX16Q9Y5Y5 336 aa8.63□□□□□ -1.03
SSBP4-215ENST00000625926 TCRBV4S1A1TA0A5B7 111 aa8.62□□□□□ -1.03
SSBP4-215ENST00000625926 H0YHG0 523 aa8.62□□□□□ -1.03
SSBP4-215ENST00000625926 CCRL2O00421 344 aa8.62□□□□□ -1.03
SSBP4-215ENST00000625926 HSD17B6O14756 317 aa8.62□□□□□ -1.03
SSBP4-215ENST00000625926 CA11O75493 328 aa8.62□□□□□ -1.03
SSBP4-215ENST00000625926 IGKV1D-33P01593 117 aa8.62□□□□□ -1.03
SSBP4-215ENST00000625926 IGKV1-33P01594 117 aa8.62□□□□□ -1.03
SSBP4-215ENST00000625926 TMEM11P17152 192 aa8.62□□□□□ -1.03
SSBP4-215ENST00000625926 FUT3P21217 361 aa8.62□□□□□ -1.03
SSBP4-215ENST00000625926 IL3RAP26951 378 aa8.62□□□□□ -1.03
SSBP4-215ENST00000625926 LOXL3P58215 753 aa8.62□□□□□ -1.03
SSBP4-215ENST00000625926 GABPB1Q06547 395 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms