RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 M0QZ24 198 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 HYAL3O43820 417 aaPredicted RBP7.83□□□□□ -1.16
VCL-206ENST00000623461 PRDX4Q13162 271 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 WDR25Q64LD2 544 aaPredicted RBP7.83□□□□□ -1.16
VCL-206ENST00000623461 BADQ92934 168 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 GPX7Q96SL4 187 aaPredicted RBP7.83□□□□□ -1.16
VCL-206ENST00000623461 RARRES2Q99969 163 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 C6orf106Q9H6K1 298 aaPredicted RBP7.83□□□□□ -1.16
VCL-206ENST00000623461 MRPS2Q9Y399 296 aaKnown RBP7.83□□□□□ -1.16
VCL-206ENST00000623461 YRDCQ86U90 279 aaKnown RBP7.83□□□□□ -1.16
VCL-206ENST00000623461 ZNF236Q9UL36 1845 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 TRIP12Q14669 1992 aaPredicted RBP7.83□□□□□ -1.16
VCL-206ENST00000623461 PRRG2O14669 202 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 FCGR3BO75015 233 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 OR2J3O76001 311 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 IGHV3-9P01782 118 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 OR1D5P58170 312 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 PSG5Q15238 335 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 DMRTC1Q5HYR2 192 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 CYB5R2Q6BCY4 276 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 WDR74Q6RFH5 385 aaPredicted RBP7.83□□□□□ -1.16
VCL-206ENST00000623461 PDPNQ86YL7 162 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 SOSTQ9BQB4 213 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 PRSS27Q9BQR3 290 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 GREB1LQ9C091 1923 aaPredicted RBP7.83□□□□□ -1.16
VCL-206ENST00000623461 PIKFYVEQ9Y2I7 2098 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 OR2T8A6NH00 312 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 LINC01387J3KSC0 135 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 PRSS1P07477 247 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 RPS11P62280 158 aaKnown RBP eCLIP7.83□□□□□ -1.16
VCL-206ENST00000623461 UBE2L3P68036 154 aaKnown RBP7.83□□□□□ -1.16
VCL-206ENST00000623461 POC1AQ8NBT0 407 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 MENTQ9BUN1 341 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 HES7Q9BYE0 225 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 OR2D2Q9H210 308 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 PEF1Q9UBV8 284 aaKnown RBP7.83□□□□□ -1.16
VCL-206ENST00000623461 SCN9AQ15858 1988 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 ID4P47928 161 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 FDX2Q6P4F2 183 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 VHLLQ6RSH7 139 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 OR52L2PQ8NGH6 319 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 IL19Q9UHD0 177 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 ZSWIM8A7E2V4 1837 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 A0A1W2PN81 502 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 C5orf52A6NGY3 159 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 AGAP20933 346 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 CCR5P51681 352 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 CEACAM16Q2WEN9 425 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 ZNF718Q3SXZ3 478 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 OR4P4Q8NGL7 312 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 ISG15P05161 165 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 ZGLP1P0C6A0 271 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 TMEM11P17152 192 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 ADTRPQ96IZ2 230 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 C12orf49Q9H741 205 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 OR2W1Q9Y3N9 320 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 IGHV3-15A0A0B4J1V0 119 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 RPL36A-HNRNPH2H7BZ11 118 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 MPDU1O75352 247 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 NTN1O95631 604 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 FAM157CP0CG43 387 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 HERVK_113P61574 105 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 CTAG1AP78358 180 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 LSM11P83369 360 aaKnown RBP eCLIP7.82□□□□□ -1.16
VCL-206ENST00000623461 PDCD1Q15116 288 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 MLF2Q15773 248 aaPredicted RBP7.82□□□□□ -1.16
VCL-206ENST00000623461 VMA21Q3ZAQ7 101 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 TGIF2LYQ8IUE0 185 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 OR2T6Q8NHC8 308 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 ZNF296Q8WUU4 475 aaPredicted RBP7.82□□□□□ -1.16
VCL-206ENST00000623461 OR4C12Q96R67 309 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 GAL3ST2Q9H3Q3 398 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 ZNF355PQ9NSJ1 428 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 SNRNP200O75643 2136 aaKnown RBP7.82□□□□□ -1.16
VCL-206ENST00000623461 CXCL13O43927 109 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 LCN2P80188 198 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 ZNF766Q5HY98 468 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 SH3BGRL2Q9UJC5 107 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 NUP214P35658 2090 aaPredicted RBP7.82□□□□□ -1.16
VCL-206ENST00000623461 TRGV10A0A0A0MS01 117 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 CRYAAP02489 173 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 AMY1AP04745 511 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 SOD3P08294 240 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 AESQ08117 197 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 TMEM116Q8NCL8 245 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 R3HDMLQ9H3Y0 253 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 CCL28Q9NRJ3 127 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 THSD7AQ9UPZ6 1657 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 PMS2P1A4D2B8 440 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 TMEM210A6NLX4 147 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 NCBP2LA6PVI3 153 aaKnown RBP7.82□□□□□ -1.16
VCL-206ENST00000623461 VENTXO95231 258 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 BTF3P20290 206 aaKnown RBP7.82□□□□□ -1.16
VCL-206ENST00000623461 PSMB2P49721 201 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 GNB1P62873 340 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 ZNF547Q8IVP9 402 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 MIEN1Q9BRT3 115 aa7.82□□□□□ -1.16
VCL-206ENST00000623461 PDCD11Q14690 1871 aaKnown RBP7.82□□□□□ -1.16
VCL-206ENST00000623461 BGLAPP02818 100 aa7.81□□□□□ -1.16
VCL-206ENST00000623461 CT62P0C5K7 136 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms