RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 UNC119Q13432 240 aa6.5□□□□□ -1.37
TRIM49B-202ENST00000622138 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.5□□□□□ -1.37
TRIM49B-202ENST00000622138 RAET1LQ5VY80 246 aa6.5□□□□□ -1.37
TRIM49B-202ENST00000622138 OR4A47Q6IF82 309 aa6.5□□□□□ -1.37
TRIM49B-202ENST00000622138 BATF2Q8N1L9 274 aa6.5□□□□□ -1.37
TRIM49B-202ENST00000622138 LRTM2Q8N967 370 aa6.5□□□□□ -1.37
TRIM49B-202ENST00000622138 ZNF596Q8TC21 504 aa6.5□□□□□ -1.37
TRIM49B-202ENST00000622138 ADIPOR1Q96A54 375 aa6.5□□□□□ -1.37
TRIM49B-202ENST00000622138 STARD4Q96DR4 205 aa6.5□□□□□ -1.37
TRIM49B-202ENST00000622138 SLC46A1Q96NT5 459 aa6.5□□□□□ -1.37
TRIM49B-202ENST00000622138 SMIM7Q9BQ49 75 aa6.5□□□□□ -1.37
TRIM49B-202ENST00000622138 ZNF586Q9NXT0 402 aa6.5□□□□□ -1.37
TRIM49B-202ENST00000622138 GNG13Q9P2W3 67 aa6.5□□□□□ -1.37
TRIM49B-202ENST00000622138 COLQQ9Y215 455 aaPredicted RBP6.5□□□□□ -1.37
TRIM49B-202ENST00000622138 SLC22A13Q9Y226 551 aa6.5□□□□□ -1.37
TRIM49B-202ENST00000622138 TRAPPC1Q9Y5R8 145 aa6.5□□□□□ -1.37
TRIM49B-202ENST00000622138 SPEGQ15772 3267 aa6.49□□□□□ -1.37
TRIM49B-202ENST00000622138 TRIOO75962 3097 aa6.49□□□□□ -1.37
TRIM49B-202ENST00000622138 DUXBA0A1W2PPF3 345 aa6.49□□□□□ -1.37
TRIM49B-202ENST00000622138 DCDC2BA2VCK2 349 aa6.49□□□□□ -1.37
TRIM49B-202ENST00000622138 ATXN7O15265 892 aaPredicted RBP6.49□□□□□ -1.37
TRIM49B-202ENST00000622138 XRCC2O43543 280 aa6.49□□□□□ -1.37
TRIM49B-202ENST00000622138 CD99P14209 185 aa6.49□□□□□ -1.37
TRIM49B-202ENST00000622138 AADACP22760 399 aa6.49□□□□□ -1.37
TRIM49B-202ENST00000622138 MC5RP33032 325 aa6.49□□□□□ -1.37
TRIM49B-202ENST00000622138 RIPPLY3P57055 190 aa6.49□□□□□ -1.37
TRIM49B-202ENST00000622138 RPL23P62829 140 aaKnown RBP6.49□□□□□ -1.37
TRIM49B-202ENST00000622138 SRPXP78539 464 aa6.49□□□□□ -1.37
TRIM49B-202ENST00000622138 GNMTQ14749 295 aa6.49□□□□□ -1.37
TRIM49B-202ENST00000622138 MSMO1Q15800 293 aa6.49□□□□□ -1.37
TRIM49B-202ENST00000622138 WBP2NLQ6ICG8 309 aa6.49□□□□□ -1.37
TRIM49B-202ENST00000622138 S100A7AQ86SG5 101 aa6.49□□□□□ -1.37
TRIM49B-202ENST00000622138 OOSP2Q86WS3 158 aa6.49□□□□□ -1.37
TRIM49B-202ENST00000622138 PRR22Q8IZ63 422 aa6.49□□□□□ -1.37
TRIM49B-202ENST00000622138 TMEM217Q8N7C4 229 aa6.49□□□□□ -1.37
TRIM49B-202ENST00000622138 Q8N976 141 aa6.49□□□□□ -1.37
TRIM49B-202ENST00000622138 ZNF784Q8NCA9 323 aaPredicted RBP6.49□□□□□ -1.37
TRIM49B-202ENST00000622138 ADOQ96SZ5 270 aa6.49□□□□□ -1.37
TRIM49B-202ENST00000622138 TMEM131Q92545 1883 aa6.49□□□□□ -1.37
TRIM49B-202ENST00000622138 ZNF891A8MT65 544 aaPredicted RBP6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 B4DGG1 531 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 DIRC3C9JPN6 131 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 RBFOX2O43251 390 aaKnown RBP eCLIP6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 NUPR1O60356 82 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 OR7C2O60412 319 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 UTS2O95399 124 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 IGHV4-34P06331 123 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 HIST1H1DP16402 221 aaKnown RBP6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 IL3RAP26951 378 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 GCH1P30793 250 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 LGALS7P47929 136 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 PPP1CBP62140 327 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 HHEXQ03014 270 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 BAXQ07812 192 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 ZNF787Q6DD87 383 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 C1orf122Q6ZSJ8 110 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 Q6ZVH6 145 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 MRGPRGQ86SM5 289 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 VASH2Q86V25 355 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 C17orf78Q8N4C9 275 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 OR2C3Q8N628 320 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 ABHD14BQ96IU4 210 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 NXF5Q9H1B4 397 aaKnown RBP6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 PARLQ9H300 379 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 C11orf1Q9H5F2 150 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 PNO1Q9NRX1 252 aaKnown RBP6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 MRPL22Q9NWU5 206 aaKnown RBP6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 HHLA2Q9UM44 414 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 MRPS28Q9Y2Q9 187 aaKnown RBP6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 ARID1BQ8NFD5 2236 aaPredicted RBP6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 ZFP92A6NM28 416 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 TMEM14DPA8MWL7 114 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 C11orf98E9PRG8 122 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 G3V4G9 280 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 TMEM250H0YL14 139 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 HS3ST1O14792 307 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 VENTXO95231 258 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 ONECUT2O95948 504 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 TNFP01375 233 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 HLA-HP01893 362 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 HPNP05981 417 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 PNMTP11086 282 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 SELENOVP59797 346 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 YPEL3P61236 119 aaPredicted RBP6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 EXT1Q16394 746 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 PLPPR5Q32ZL2 321 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 C1orf140Q5VVS0 124 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 TMEM144Q7Z5S9 345 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 SULF2Q8IWU5 870 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 SAXO1Q8IYX7 474 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 LGI3Q8N145 548 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 MUC15Q8N387 334 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 OTOSQ8NHW6 89 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 MBD3L1Q8WWY6 194 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 TMEM186Q96B77 213 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 PCNX3Q9H6A9 2034 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 FBRSQ9HAH7 460 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 ELOVL3Q9HB03 270 aa6.48□□□□□ -1.37
TRIM49B-202ENST00000622138 CPAMD8Q8IZJ3 1885 aa6.47□□□□□ -1.37
TRIM49B-202ENST00000622138 KIR2DS5A0A0G2JLQ3 304 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 240.2 ms