RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 LGALS14Q8TCE9 139 aa11.65□□□□□ -0.54
CBWD3-217ENST00000621474 CCDC107Q8WV48 283 aa11.65□□□□□ -0.54
CBWD3-217ENST00000621474 ARHGAP5-AS1Q96IT6 56 aa11.65□□□□□ -0.54
CBWD3-217ENST00000621474 KIRREL1Q96J84 757 aa11.65□□□□□ -0.54
CBWD3-217ENST00000621474 NEDD4LQ96PU5 975 aa11.65□□□□□ -0.54
CBWD3-217ENST00000621474 MBNL3Q9NUK0 354 aaKnown RBP11.65□□□□□ -0.54
CBWD3-217ENST00000621474 CALYQ9NYX4 217 aa11.65□□□□□ -0.54
CBWD3-217ENST00000621474 HSF4Q9ULV5 492 aa11.65□□□□□ -0.54
CBWD3-217ENST00000621474 SESN1Q9Y6P5 492 aa11.65□□□□□ -0.54
CBWD3-217ENST00000621474 CA11O75493 328 aa11.64□□□□□ -0.55
CBWD3-217ENST00000621474 VENTXO95231 258 aa11.64□□□□□ -0.55
CBWD3-217ENST00000621474 IFNA2P01563 188 aa11.64□□□□□ -0.55
CBWD3-217ENST00000621474 RCC1P18754 421 aaPredicted RBP11.64□□□□□ -0.55
CBWD3-217ENST00000621474 COX7A1P24310 79 aa11.64□□□□□ -0.55
CBWD3-217ENST00000621474 FPR2P25090 351 aa11.64□□□□□ -0.55
CBWD3-217ENST00000621474 HILS1P60008 231 aa11.64□□□□□ -0.55
CBWD3-217ENST00000621474 SCGB2A2Q13296 93 aa11.64□□□□□ -0.55
CBWD3-217ENST00000621474 OR11H6Q8NGC7 330 aa11.64□□□□□ -0.55
CBWD3-217ENST00000621474 SLC25A46Q96AG3 418 aa11.64□□□□□ -0.55
CBWD3-217ENST00000621474 SLC25A38Q96DW6 304 aa11.64□□□□□ -0.55
CBWD3-217ENST00000621474 TMEM133Q9H2Q1 129 aa11.64□□□□□ -0.55
CBWD3-217ENST00000621474 HEXA-AS1Q9H8Q6 139 aa11.64□□□□□ -0.55
CBWD3-217ENST00000621474 PLEKHJ1Q9NW61 149 aa11.64□□□□□ -0.55
CBWD3-217ENST00000621474 A0A087X0M5 115 aa11.64□□□□□ -0.55
CBWD3-217ENST00000621474 IGHV2-26A0A0B4J1V2 119 aa11.64□□□□□ -0.55
CBWD3-217ENST00000621474 A0A1B0GX30 115 aa11.64□□□□□ -0.55
CBWD3-217ENST00000621474 FAM172BPA6NC97 362 aa11.64□□□□□ -0.55
CBWD3-217ENST00000621474 H3BUI4 141 aa11.64□□□□□ -0.55
CBWD3-217ENST00000621474 NAPSAO96009 420 aa11.64□□□□□ -0.55
CBWD3-217ENST00000621474 RANBP1P43487 201 aa11.64□□□□□ -0.55
CBWD3-217ENST00000621474 RPL5P46777 297 aaKnown RBP11.64□□□□□ -0.55
CBWD3-217ENST00000621474 IDNKQ5T6J7 187 aa11.64□□□□□ -0.55
CBWD3-217ENST00000621474 ZNF626Q68DY1 528 aa11.64□□□□□ -0.55
CBWD3-217ENST00000621474 C5orf24Q7Z6I8 188 aa11.64□□□□□ -0.55
CBWD3-217ENST00000621474 ZDHHC22Q8N966 263 aa11.64□□□□□ -0.55
CBWD3-217ENST00000621474 OR56B1Q8NGI3 324 aa11.64□□□□□ -0.55
CBWD3-217ENST00000621474 RFESDQ8TAC1 157 aa11.64□□□□□ -0.55
CBWD3-217ENST00000621474 HDHD3Q9BSH5 251 aaPredicted RBP11.64□□□□□ -0.55
CBWD3-217ENST00000621474 PECRQ9BY49 303 aa11.64□□□□□ -0.55
CBWD3-217ENST00000621474 AK3Q9UIJ7 227 aa11.64□□□□□ -0.55
CBWD3-217ENST00000621474 TCF21O43680 179 aa11.63□□□□□ -0.55
CBWD3-217ENST00000621474 SERPINB10P48595 397 aa11.63□□□□□ -0.55
CBWD3-217ENST00000621474 SCAND1P57086 179 aa11.63□□□□□ -0.55
CBWD3-217ENST00000621474 FAM53AQ6NSI3 398 aaPredicted RBP11.63□□□□□ -0.55
CBWD3-217ENST00000621474 Q6ZTK2 550 aa11.63□□□□□ -0.55
CBWD3-217ENST00000621474 LHFPL4Q7Z7J7 247 aa11.63□□□□□ -0.55
CBWD3-217ENST00000621474 OR10R2Q8NGX6 335 aa11.63□□□□□ -0.55
CBWD3-217ENST00000621474 UBALD1Q8TB05 177 aa11.63□□□□□ -0.55
CBWD3-217ENST00000621474 NDNFQ8TB73 568 aa11.63□□□□□ -0.55
CBWD3-217ENST00000621474 SUCNR1Q9BXA5 334 aa11.63□□□□□ -0.55
CBWD3-217ENST00000621474 ZNF286AQ9HBT8 521 aa11.63□□□□□ -0.55
CBWD3-217ENST00000621474 MEIOCA2RUB1 952 aa11.62□□□□□ -0.55
CBWD3-217ENST00000621474 C12orf77C9JDV5 145 aa11.62□□□□□ -0.55
CBWD3-217ENST00000621474 MFNGO00587 321 aa11.62□□□□□ -0.55
CBWD3-217ENST00000621474 ORC5O43913 435 aa11.62□□□□□ -0.55
CBWD3-217ENST00000621474 GZMHP20718 246 aa11.62□□□□□ -0.55
CBWD3-217ENST00000621474 PAX6P26367 422 aa11.62□□□□□ -0.55
CBWD3-217ENST00000621474 CD34P28906 385 aa11.62□□□□□ -0.55
CBWD3-217ENST00000621474 LOXL3P58215 753 aa11.62□□□□□ -0.55
CBWD3-217ENST00000621474 MIDNQ504T8 468 aa11.62□□□□□ -0.55
CBWD3-217ENST00000621474 ZNF880Q6PDB4 577 aa11.62□□□□□ -0.55
CBWD3-217ENST00000621474 OR4P4Q8NGL7 312 aa11.62□□□□□ -0.55
CBWD3-217ENST00000621474 OR13D1Q8NGV5 346 aa11.62□□□□□ -0.55
CBWD3-217ENST00000621474 ZNF418Q8TF45 676 aaPredicted RBP11.62□□□□□ -0.55
CBWD3-217ENST00000621474 IDI2-AS1Q9NZ38 188 aa11.62□□□□□ -0.55
CBWD3-217ENST00000621474 ZNRD1Q9P1U0 126 aa11.62□□□□□ -0.55
CBWD3-217ENST00000621474 TRAPPC2LQ9UL33 140 aa11.62□□□□□ -0.55
CBWD3-217ENST00000621474 TMEM127O75204 238 aa11.61□□□□□ -0.55
CBWD3-217ENST00000621474 IGLV1-47P01700 117 aa11.61□□□□□ -0.55
CBWD3-217ENST00000621474 Q6YL49 198 aa11.61□□□□□ -0.55
CBWD3-217ENST00000621474 DYNAPQ8N1N2 210 aa11.61□□□□□ -0.55
CBWD3-217ENST00000621474 ABHD12Q8N2K0 398 aa11.61□□□□□ -0.55
CBWD3-217ENST00000621474 ARL11Q969Q4 196 aa11.61□□□□□ -0.55
CBWD3-217ENST00000621474 RAB3CQ96E17 227 aa11.61□□□□□ -0.55
CBWD3-217ENST00000621474 CLEC7AQ9BXN2 247 aa11.61□□□□□ -0.55
CBWD3-217ENST00000621474 ATG5Q9H1Y0 275 aa11.61□□□□□ -0.55
CBWD3-217ENST00000621474 ZMAT3Q9HA38 289 aaKnown RBP11.61□□□□□ -0.55
CBWD3-217ENST00000621474 RHBDL2Q9NX52 303 aa11.61□□□□□ -0.55
CBWD3-217ENST00000621474 ELF5Q9UKW6 265 aaPredicted RBP11.61□□□□□ -0.55
CBWD3-217ENST00000621474 SPATA2Q9UM82 520 aa11.61□□□□□ -0.55
CBWD3-217ENST00000621474 ETV7Q9Y603 341 aa11.61□□□□□ -0.55
CBWD3-217ENST00000621474 TRBV6-6A0A0A6YYG2 114 aa11.6□□□□□ -0.55
CBWD3-217ENST00000621474 A0A0A6YYJ9 748 aa11.6□□□□□ -0.55
CBWD3-217ENST00000621474 METTL21EPA6NDL7 271 aa11.6□□□□□ -0.55
CBWD3-217ENST00000621474 DNAJC9-AS1A6NH13 148 aa11.6□□□□□ -0.55
CBWD3-217ENST00000621474 F2RL2O00254 374 aa11.6□□□□□ -0.55
CBWD3-217ENST00000621474 ARG1P05089 322 aa11.6□□□□□ -0.55
CBWD3-217ENST00000621474 MELTFP08582 738 aa11.6□□□□□ -0.55
CBWD3-217ENST00000621474 HIST1H1DP16402 221 aaKnown RBP11.6□□□□□ -0.55
CBWD3-217ENST00000621474 GNB3P16520 340 aa11.6□□□□□ -0.55
CBWD3-217ENST00000621474 LTC4SQ16873 150 aa11.6□□□□□ -0.55
CBWD3-217ENST00000621474 KRTAP21-3Q3LHN1 58 aa11.6□□□□□ -0.55
CBWD3-217ENST00000621474 OR52W1Q6IF63 320 aa11.6□□□□□ -0.55
CBWD3-217ENST00000621474 LDLRAD3Q86YD5 345 aa11.6□□□□□ -0.55
CBWD3-217ENST00000621474 CLVS1Q8IUQ0 354 aaPredicted RBP11.6□□□□□ -0.55
CBWD3-217ENST00000621474 CROCCP3Q8IVE0 287 aa11.6□□□□□ -0.55
CBWD3-217ENST00000621474 OR10A7Q8NGE5 316 aa11.6□□□□□ -0.55
CBWD3-217ENST00000621474 OR1L1Q8NH94 360 aa11.6□□□□□ -0.55
CBWD3-217ENST00000621474 LEAP2Q969E1 77 aa11.6□□□□□ -0.55
CBWD3-217ENST00000621474 DUX5Q96PT3 197 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms