RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 CELA3AP09093 270 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 CALCRP30988 508 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 CD80P33681 288 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 ID4P47928 161 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 S100A12P80511 92 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 ERHP84090 104 aaKnown RBP7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 PRB3Q04118 309 aaPredicted RBP7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 UNC119Q13432 240 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 PDZD11Q5EBL8 140 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 MALRD1Q5VYJ5 2156 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 NAA40Q86UY6 237 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 WDFY1Q8IWB7 410 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 OR10P1Q8NGE3 313 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 TMEM171Q8WVE6 324 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 LHX4Q969G2 390 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 RSRP1Q9BUV0 290 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 RAB1BQ9H0U4 201 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 MOB1AQ9H8S9 216 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 KCNK7Q9Y2U2 307 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 LRP5LA4QPB2 252 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 GEMIN2O14893 280 aaKnown RBP7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 ST8SIA5O15466 376 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 DHRS3O75911 302 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 CTRB1P17538 263 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 AKR1C3P42330 323 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 CTRB2Q6GPI1 263 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 SLC25A42Q86VD7 318 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 ZNF441Q8N8Z8 693 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 EDARADDQ8WWZ3 215 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 WNT2BQ93097 391 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 AP1S3Q96PC3 154 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 SOX7Q9BT81 388 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 STARD10Q9Y365 291 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 HILPDAQ9Y5L2 63 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 PRR14LQ5THK1 2151 aa7.2□□□□□ -1.26
PTPDC1-204ENST00000620992 HIST2H3AQ71DI3 136 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 RNF144BQ7Z419 303 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 OR2M3Q8NG83 312 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 MITD1Q8WV92 249 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 OIT3Q8WWZ8 545 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 EAF1Q96JC9 268 aaPredicted RBP7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 NKX6-2Q9C056 277 aaPredicted RBP7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 RAXQ9Y2V3 346 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 IGHV3-35A0A0C4DH35 117 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 RNF222A6NCQ9 220 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 SOCS1O15524 211 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 CD74P04233 296 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 PSMB6P28072 239 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 PAQR4Q8N4S7 273 aaPredicted RBP7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 AQP3Q92482 292 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 TMEM208Q9BTX3 173 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 OR2D2Q9H210 308 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 LRP4O75096 1905 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 PRRC2CQ9Y520 2896 aaKnown RBP7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 TMEM30CPA0ZSE6 113 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 C1orf196B1AJZ1 125 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 GPR31O00270 319 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 TRAF3IP2O43734 574 aaPredicted RBP7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 ADAP1O75689 374 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 LY86O95711 162 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 CD8AP01732 235 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 SLC25A4P12235 298 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 RAB5BP61020 215 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 AESQ08117 197 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 PIGYQ3MUY2 71 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 Q56UQ5 140 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 C1orf100Q5SVJ3 147 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 WFDC3Q8IUB2 231 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 M1APQ8TC57 530 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 ASB13Q8WXK3 278 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 DNASE2BQ8WZ79 361 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 MARC2Q969Z3 335 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 ABHD17AQ96GS6 310 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 CLN8Q9UBY8 286 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 RFPL3SP0C7P2 107 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 NAT2P11245 290 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 MMP16P51512 607 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 SUB1P53999 127 aaKnown RBP eCLIP7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 KIAA0141Q14154 515 aaPredicted RBP7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 RNF133Q8WVZ7 376 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 ADGRG7Q96K78 797 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 KCNK17Q96T54 332 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 HDHD3Q9BSH5 251 aaPredicted RBP7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 F8P00451 2351 aa7.19□□□□□ -1.26
PTPDC1-204ENST00000620992 A0A1B0GTI1 187 aa7.18□□□□□ -1.26
PTPDC1-204ENST00000620992 LDLRAD4O15165 306 aa7.18□□□□□ -1.26
PTPDC1-204ENST00000620992 TO15178 435 aa7.18□□□□□ -1.26
PTPDC1-204ENST00000620992 ISG15P05161 165 aa7.18□□□□□ -1.26
PTPDC1-204ENST00000620992 H2AFB1P0C5Y9 115 aa7.18□□□□□ -1.26
PTPDC1-204ENST00000620992 OPRK1P41145 380 aa7.18□□□□□ -1.26
PTPDC1-204ENST00000620992 PEA15Q15121 130 aa7.18□□□□□ -1.26
PTPDC1-204ENST00000620992 FBXW9Q5XUX1 488 aa7.18□□□□□ -1.26
PTPDC1-204ENST00000620992 TMEM211Q6ICI0 200 aa7.18□□□□□ -1.26
PTPDC1-204ENST00000620992 DPF1Q92782 380 aa7.18□□□□□ -1.26
PTPDC1-204ENST00000620992 CYYR1Q96J86 154 aa7.18□□□□□ -1.26
PTPDC1-204ENST00000620992 TAF9BQ9HBM6 251 aa7.18□□□□□ -1.26
PTPDC1-204ENST00000620992 GPR35Q9HC97 309 aa7.18□□□□□ -1.26
PTPDC1-204ENST00000620992 HES4Q9HCC6 221 aa7.18□□□□□ -1.26
PTPDC1-204ENST00000620992 FAM206AQ9NX38 181 aa7.18□□□□□ -1.26
PTPDC1-204ENST00000620992 WIPF3A6NGB9 483 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms