RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 IFNL4K9M1U5 179 aa9.91□□□□□ -0.82
CLIP1-219ENST00000620786 CEACAM1P13688 526 aa9.91□□□□□ -0.82
CLIP1-219ENST00000620786 RPL13AP40429 203 aaKnown RBP9.91□□□□□ -0.82
CLIP1-219ENST00000620786 SUMO1P63165 101 aaKnown RBP9.91□□□□□ -0.82
CLIP1-219ENST00000620786 INPP5JQ15735 1006 aaPredicted RBP9.91□□□□□ -0.82
CLIP1-219ENST00000620786 TMEM167BQ9NRX6 74 aa9.91□□□□□ -0.82
CLIP1-219ENST00000620786 MED19A0JLT2 244 aaPredicted RBP9.91□□□□□ -0.82
CLIP1-219ENST00000620786 CYB5R3P00387 301 aaPredicted RBP9.91□□□□□ -0.82
CLIP1-219ENST00000620786 ST3GAL2Q16842 350 aa9.91□□□□□ -0.82
CLIP1-219ENST00000620786 NUP37Q8NFH4 326 aa9.91□□□□□ -0.82
CLIP1-219ENST00000620786 STARD4Q96DR4 205 aa9.91□□□□□ -0.82
CLIP1-219ENST00000620786 CCL27Q9Y4X3 112 aa9.91□□□□□ -0.82
CLIP1-219ENST00000620786 RAB29O14966 203 aa9.9□□□□□ -0.82
CLIP1-219ENST00000620786 PMCHP20382 165 aa9.9□□□□□ -0.82
CLIP1-219ENST00000620786 GALR1P47211 349 aa9.9□□□□□ -0.82
CLIP1-219ENST00000620786 TFPI2P48307 235 aa9.9□□□□□ -0.82
CLIP1-219ENST00000620786 ZNF273Q14593 569 aa9.9□□□□□ -0.82
CLIP1-219ENST00000620786 GUK1Q16774 197 aa9.9□□□□□ -0.82
CLIP1-219ENST00000620786 CEACAM21Q3KPI0 293 aa9.9□□□□□ -0.82
CLIP1-219ENST00000620786 C16orf82Q7Z2V1 217 aa9.9□□□□□ -0.82
CLIP1-219ENST00000620786 PERPQ96FX8 193 aa9.9□□□□□ -0.82
CLIP1-219ENST00000620786 TDRD15B5MCY1 1934 aaKnown RBP9.9□□□□□ -0.82
CLIP1-219ENST00000620786 MYO16Q9Y6X6 1858 aa9.9□□□□□ -0.82
CLIP1-219ENST00000620786 CA11O75493 328 aa9.9□□□□□ -0.82
CLIP1-219ENST00000620786 ORM1P02763 201 aa9.9□□□□□ -0.82
CLIP1-219ENST00000620786 MGPP08493 103 aa9.9□□□□□ -0.82
CLIP1-219ENST00000620786 MVDP53602 400 aa9.9□□□□□ -0.82
CLIP1-219ENST00000620786 IL24Q13007 206 aa9.9□□□□□ -0.82
CLIP1-219ENST00000620786 TUSC1Q2TAM9 212 aa9.9□□□□□ -0.82
CLIP1-219ENST00000620786 TPRX1Q8N7U7 411 aa9.9□□□□□ -0.82
CLIP1-219ENST00000620786 LINC01560Q8TB33 94 aa9.9□□□□□ -0.82
CLIP1-219ENST00000620786 SSMEM1Q8WWF3 244 aa9.9□□□□□ -0.82
CLIP1-219ENST00000620786 INHBBP09529 407 aa9.9□□□□□ -0.82
CLIP1-219ENST00000620786 HIST1H1EP10412 219 aaKnown RBP9.9□□□□□ -0.82
CLIP1-219ENST00000620786 ADAT3Q96EY9 351 aaPredicted RBP9.9□□□□□ -0.82
CLIP1-219ENST00000620786 NPAS1Q99742 590 aa9.9□□□□□ -0.82
CLIP1-219ENST00000620786 OR2T8A6NH00 312 aa9.9□□□□□ -0.83
CLIP1-219ENST00000620786 LY6EQ16553 131 aa9.9□□□□□ -0.83
CLIP1-219ENST00000620786 C5orf17Q8NAS9 161 aa9.9□□□□□ -0.83
CLIP1-219ENST00000620786 ZBTB34Q8NCN2 500 aa9.9□□□□□ -0.83
CLIP1-219ENST00000620786 FDCSPQ8NFU4 85 aa9.9□□□□□ -0.83
CLIP1-219ENST00000620786 ZPLD1Q8TCW7 415 aa9.9□□□□□ -0.83
CLIP1-219ENST00000620786 FAM222BQ8WU58 562 aa9.9□□□□□ -0.83
CLIP1-219ENST00000620786 MRGPRFQ96AM1 343 aa9.9□□□□□ -0.83
CLIP1-219ENST00000620786 MMP24Q9Y5R2 645 aa9.9□□□□□ -0.83
CLIP1-219ENST00000620786 IGHV3-72A0A0B4J1Y9 119 aa9.89□□□□□ -0.83
CLIP1-219ENST00000620786 GREM1O60565 184 aa9.89□□□□□ -0.83
CLIP1-219ENST00000620786 RBM11P57052 281 aaKnown RBP9.89□□□□□ -0.83
CLIP1-219ENST00000620786 PCOLCEQ15113 449 aa9.89□□□□□ -0.83
CLIP1-219ENST00000620786 PSG5Q15238 335 aa9.89□□□□□ -0.83
CLIP1-219ENST00000620786 OR4P4Q8NGL7 312 aa9.89□□□□□ -0.83
CLIP1-219ENST00000620786 NAT8BQ9UHF3 227 aa9.89□□□□□ -0.83
CLIP1-219ENST00000620786 HSBP1O75506 76 aa9.89□□□□□ -0.83
CLIP1-219ENST00000620786 FAM87AP0C7U9 286 aa9.89□□□□□ -0.83
CLIP1-219ENST00000620786 PGA4P0DJD7 388 aa9.89□□□□□ -0.83
CLIP1-219ENST00000620786 PRSS3P2Q8NHM4 247 aa9.89□□□□□ -0.83
CLIP1-219ENST00000620786 WDFY2Q96P53 400 aa9.89□□□□□ -0.83
CLIP1-219ENST00000620786 PSG2P11465 335 aa9.89□□□□□ -0.83
CLIP1-219ENST00000620786 MGAT2Q10469 447 aa9.89□□□□□ -0.83
CLIP1-219ENST00000620786 ZNF154Q13106 437 aa9.89□□□□□ -0.83
CLIP1-219ENST00000620786 XAF1Q6GPH4 301 aa9.89□□□□□ -0.83
CLIP1-219ENST00000620786 CLEC9AQ6UXN8 241 aa9.89□□□□□ -0.83
CLIP1-219ENST00000620786 EAF1Q96JC9 268 aaPredicted RBP9.89□□□□□ -0.83
CLIP1-219ENST00000620786 A0A1W2PR77 199 aa9.89□□□□□ -0.83
CLIP1-219ENST00000620786 CHST1O43916 411 aa9.89□□□□□ -0.83
CLIP1-219ENST00000620786 CPN1P15169 458 aa9.89□□□□□ -0.83
CLIP1-219ENST00000620786 HLA-GP17693 338 aa9.89□□□□□ -0.83
CLIP1-219ENST00000620786 TMEM241Q24JQ0 296 aa9.89□□□□□ -0.83
CLIP1-219ENST00000620786 PRSS54Q6PEW0 395 aa9.89□□□□□ -0.83
CLIP1-219ENST00000620786 ELOVL5Q9NYP7 299 aa9.89□□□□□ -0.83
CLIP1-219ENST00000620786 METTL1Q9UBP6 276 aaKnown RBP9.89□□□□□ -0.83
CLIP1-219ENST00000620786 MIOXQ9UGB7 285 aa9.89□□□□□ -0.83
CLIP1-219ENST00000620786 MGST3O14880 152 aa9.89□□□□□ -0.83
CLIP1-219ENST00000620786 MPC2O95563 127 aa9.89□□□□□ -0.83
CLIP1-219ENST00000620786 EIF4EBP2Q13542 120 aaPredicted RBP9.89□□□□□ -0.83
CLIP1-219ENST00000620786 SURF2Q15527 256 aaPredicted RBP9.89□□□□□ -0.83
CLIP1-219ENST00000620786 GCSAMQ8N6F7 178 aa9.89□□□□□ -0.83
CLIP1-219ENST00000620786 PRDM14Q9GZV8 571 aa9.89□□□□□ -0.83
CLIP1-219ENST00000620786 TRPM6Q9BX84 2022 aa9.88□□□□□ -0.83
CLIP1-219ENST00000620786 J3QR06 171 aa9.88□□□□□ -0.83
CLIP1-219ENST00000620786 CLEC18BQ6UXF7 455 aa9.88□□□□□ -0.83
CLIP1-219ENST00000620786 COMMD1Q8N668 190 aa9.88□□□□□ -0.83
CLIP1-219ENST00000620786 BVESQ8NE79 360 aa9.88□□□□□ -0.83
CLIP1-219ENST00000620786 TO15178 435 aa9.88□□□□□ -0.83
CLIP1-219ENST00000620786 ASAH2BP0C7U1 165 aa9.88□□□□□ -0.83
CLIP1-219ENST00000620786 ERGP11308 486 aa9.88□□□□□ -0.83
CLIP1-219ENST00000620786 P2RY1P47900 373 aa9.88□□□□□ -0.83
CLIP1-219ENST00000620786 FAM78BQ5VT40 261 aa9.88□□□□□ -0.83
CLIP1-219ENST00000620786 OR4C45A6NMZ5 311 aa9.88□□□□□ -0.83
CLIP1-219ENST00000620786 DXOO77932 396 aaKnown RBP9.88□□□□□ -0.83
CLIP1-219ENST00000620786 SLC6A1P30531 599 aa9.88□□□□□ -0.83
CLIP1-219ENST00000620786 TMEM18Q96B42 140 aa9.88□□□□□ -0.83
CLIP1-219ENST00000620786 FBXL17Q9UF56 701 aa9.88□□□□□ -0.83
CLIP1-219ENST00000620786 IGHV3OR16-10A0A075B7F0 116 aa9.88□□□□□ -0.83
CLIP1-219ENST00000620786 ADAP1O75689 374 aa9.88□□□□□ -0.83
CLIP1-219ENST00000620786 RNFT1Q5M7Z0 435 aa9.88□□□□□ -0.83
CLIP1-219ENST00000620786 EBLN2Q6P2I7 272 aa9.88□□□□□ -0.83
CLIP1-219ENST00000620786 DCTN5Q9BTE1 182 aa9.88□□□□□ -0.83
CLIP1-219ENST00000620786 SRXN1Q9BYN0 137 aa9.88□□□□□ -0.83
CLIP1-219ENST00000620786 GHITMQ9H3K2 345 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms