RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 UNQ9370/PRO34162Q6UXP9 181 aa9.45□□□□□ -0.9
UPF3B-204ENST00000619445 SLC35E3Q7Z769 313 aa9.45□□□□□ -0.9
UPF3B-204ENST00000619445 TGIF2LXQ8IUE1 241 aa9.45□□□□□ -0.9
UPF3B-204ENST00000619445 IZUMO1Q8IYV9 350 aa9.45□□□□□ -0.9
UPF3B-204ENST00000619445 PQLC1Q8N2U9 271 aa9.45□□□□□ -0.9
UPF3B-204ENST00000619445 LINC00482Q8N8I6 264 aa9.45□□□□□ -0.9
UPF3B-204ENST00000619445 SUMF2Q8NBJ7 301 aa9.45□□□□□ -0.9
UPF3B-204ENST00000619445 RFESDQ8TAC1 157 aa9.45□□□□□ -0.9
UPF3B-204ENST00000619445 THRSPQ92748 146 aa9.45□□□□□ -0.9
UPF3B-204ENST00000619445 SMIM19Q96E16 107 aa9.45□□□□□ -0.9
UPF3B-204ENST00000619445 C8orf4Q9NR00 106 aa9.45□□□□□ -0.9
UPF3B-204ENST00000619445 TAS2R4Q9NYW5 299 aa9.45□□□□□ -0.9
UPF3B-204ENST00000619445 EXOSC1Q9Y3B2 195 aaKnown RBP9.45□□□□□ -0.9
UPF3B-204ENST00000619445 NUDT19A8MXV4 375 aa9.44□□□□□ -0.9
UPF3B-204ENST00000619445 RRP9O43818 475 aaKnown RBP9.44□□□□□ -0.9
UPF3B-204ENST00000619445 CA11O75493 328 aa9.44□□□□□ -0.9
UPF3B-204ENST00000619445 IGKV1D-33P01593 117 aa9.44□□□□□ -0.9
UPF3B-204ENST00000619445 IGKV1-33P01594 117 aa9.44□□□□□ -0.9
UPF3B-204ENST00000619445 SSTR5P35346 364 aa9.44□□□□□ -0.9
UPF3B-204ENST00000619445 MYCNOSP40205 109 aa9.44□□□□□ -0.9
UPF3B-204ENST00000619445 THBS3P49746 956 aa9.44□□□□□ -0.9
UPF3B-204ENST00000619445 RIPK1Q13546 671 aa9.44□□□□□ -0.9
UPF3B-204ENST00000619445 STEAP3Q658P3 488 aa9.44□□□□□ -0.9
UPF3B-204ENST00000619445 TEX38Q6PEX7 206 aa9.44□□□□□ -0.9
UPF3B-204ENST00000619445 CDH26Q8IXH8 852 aa9.44□□□□□ -0.9
UPF3B-204ENST00000619445 OR2T10Q8NGZ9 312 aa9.44□□□□□ -0.9
UPF3B-204ENST00000619445 PLPPR1Q8TBJ4 325 aa9.44□□□□□ -0.9
UPF3B-204ENST00000619445 S100A14Q9HCY8 104 aa9.44□□□□□ -0.9
UPF3B-204ENST00000619445 LIN7CQ9NUP9 197 aaKnown RBP9.44□□□□□ -0.9
UPF3B-204ENST00000619445 BABAM2Q9NXR7 383 aa9.44□□□□□ -0.9
UPF3B-204ENST00000619445 SMPD3Q9NY59 655 aaPredicted RBP9.44□□□□□ -0.9
UPF3B-204ENST00000619445 ING4Q9UNL4 249 aa9.44□□□□□ -0.9
UPF3B-204ENST00000619445 IGHV1-3A0A0C4DH29 117 aa9.43□□□□□ -0.9
UPF3B-204ENST00000619445 OGG1O15527 345 aa9.43□□□□□ -0.9
UPF3B-204ENST00000619445 SPINT2O43291 252 aa9.43□□□□□ -0.9
UPF3B-204ENST00000619445 GPX5O75715 221 aa9.43□□□□□ -0.9
UPF3B-204ENST00000619445 CDRT1O95170 752 aa9.43□□□□□ -0.9
UPF3B-204ENST00000619445 CD1BP29016 333 aa9.43□□□□□ -0.9
UPF3B-204ENST00000619445 GNG10P50151 68 aa9.43□□□□□ -0.9
UPF3B-204ENST00000619445 GTF2A1P52655 376 aaPredicted RBP9.43□□□□□ -0.9
UPF3B-204ENST00000619445 TAS2R43P59537 309 aa9.43□□□□□ -0.9
UPF3B-204ENST00000619445 LTC4SQ16873 150 aa9.43□□□□□ -0.9
UPF3B-204ENST00000619445 Q499Y3 187 aa9.43□□□□□ -0.9
UPF3B-204ENST00000619445 YIF1BQ5BJH7 314 aa9.43□□□□□ -0.9
UPF3B-204ENST00000619445 VAX1Q5SQQ9 334 aa9.43□□□□□ -0.9
UPF3B-204ENST00000619445 C6orf183Q5T699 404 aa9.43□□□□□ -0.9
UPF3B-204ENST00000619445 OR2W3Q7Z3T1 314 aa9.43□□□□□ -0.9
UPF3B-204ENST00000619445 MOB3BQ86TA1 216 aa9.43□□□□□ -0.9
UPF3B-204ENST00000619445 MRPL41Q8IXM3 137 aaKnown RBP9.43□□□□□ -0.9
UPF3B-204ENST00000619445 SETD9Q8NE22 299 aa9.43□□□□□ -0.9
UPF3B-204ENST00000619445 OR10K1Q8NGX5 313 aa9.43□□□□□ -0.9
UPF3B-204ENST00000619445 NEK7Q8TDX7 302 aa9.43□□□□□ -0.9
UPF3B-204ENST00000619445 RGP1Q92546 391 aaPredicted RBP9.43□□□□□ -0.9
UPF3B-204ENST00000619445 LEAP2Q969E1 77 aa9.43□□□□□ -0.9
UPF3B-204ENST00000619445 ARL11Q969Q4 196 aa9.43□□□□□ -0.9
UPF3B-204ENST00000619445 SLC29A1Q99808 456 aa9.43□□□□□ -0.9
UPF3B-204ENST00000619445 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.43□□□□□ -0.9
UPF3B-204ENST00000619445 AASSQ9UDR5 926 aa9.43□□□□□ -0.9
UPF3B-204ENST00000619445 DIMT1Q9UNQ2 313 aaKnown RBP9.43□□□□□ -0.9
UPF3B-204ENST00000619445 TENM3Q9P273 2699 aa9.43□□□□□ -0.9
UPF3B-204ENST00000619445 FAM90A10PA6NDY2 464 aa9.42□□□□□ -0.9
UPF3B-204ENST00000619445 FAM90A7PA6NKC0 464 aa9.42□□□□□ -0.9
UPF3B-204ENST00000619445 SH2D7A6NKC9 451 aaPredicted RBP9.42□□□□□ -0.9
UPF3B-204ENST00000619445 FAM90A23PA8MXZ1 464 aa9.42□□□□□ -0.9
UPF3B-204ENST00000619445 MCRIP1C9JLW8 97 aa9.42□□□□□ -0.9
UPF3B-204ENST00000619445 K7EIL1 84 aa9.42□□□□□ -0.9
UPF3B-204ENST00000619445 SDCBPO00560 298 aaPredicted RBP9.42□□□□□ -0.9
UPF3B-204ENST00000619445 GEMIN2O14893 280 aaKnown RBP9.42□□□□□ -0.9
UPF3B-204ENST00000619445 MOSP00540 346 aa9.42□□□□□ -0.9
UPF3B-204ENST00000619445 GLAP06280 429 aa9.42□□□□□ -0.9
UPF3B-204ENST00000619445 SERPINA2P20848 420 aa9.42□□□□□ -0.9
UPF3B-204ENST00000619445 PNLIPRP3Q17RR3 467 aa9.42□□□□□ -0.9
UPF3B-204ENST00000619445 CXorf66Q5JRM2 361 aaPredicted RBP9.42□□□□□ -0.9
UPF3B-204ENST00000619445 ATAD3CQ5T2N8 411 aa9.42□□□□□ -0.9
UPF3B-204ENST00000619445 TTC23Q5W5X9 447 aa9.42□□□□□ -0.9
UPF3B-204ENST00000619445 ZNF497Q6ZNH5 498 aa9.42□□□□□ -0.9
UPF3B-204ENST00000619445 ZNF554Q86TJ5 538 aa9.42□□□□□ -0.9
UPF3B-204ENST00000619445 ZNF329Q86UD4 541 aa9.42□□□□□ -0.9
UPF3B-204ENST00000619445 ZNF695Q8IW36 515 aa9.42□□□□□ -0.9
UPF3B-204ENST00000619445 STPG2Q8N412 459 aa9.42□□□□□ -0.9
UPF3B-204ENST00000619445 APH1BQ8WW43 257 aa9.42□□□□□ -0.9
UPF3B-204ENST00000619445 EAF1Q96JC9 268 aaPredicted RBP9.42□□□□□ -0.9
UPF3B-204ENST00000619445 ZNF184Q99676 751 aaPredicted RBP9.42□□□□□ -0.9
UPF3B-204ENST00000619445 CHCHD6Q9BRQ6 235 aa9.42□□□□□ -0.9
UPF3B-204ENST00000619445 ABCG5Q9H222 651 aa9.42□□□□□ -0.9
UPF3B-204ENST00000619445 GFOD1Q9NXC2 390 aa9.42□□□□□ -0.9
UPF3B-204ENST00000619445 SIRT4Q9Y6E7 314 aaPredicted RBP9.42□□□□□ -0.9
UPF3B-204ENST00000619445 TRBV5-5A0A0J9YX44 114 aa9.41□□□□□ -0.9
UPF3B-204ENST00000619445 NCBP2LA6PVI3 153 aaKnown RBP9.41□□□□□ -0.9
UPF3B-204ENST00000619445 C15orf65H3BRN8 121 aa9.41□□□□□ -0.9
UPF3B-204ENST00000619445 AIPO00170 330 aa9.41□□□□□ -0.9
UPF3B-204ENST00000619445 RAMP3O60896 148 aa9.41□□□□□ -0.9
UPF3B-204ENST00000619445 WBP4O75554 376 aaKnown RBP9.41□□□□□ -0.9
UPF3B-204ENST00000619445 IGHV3-7P01780 117 aa9.41□□□□□ -0.9
UPF3B-204ENST00000619445 MT-ND4P03905 459 aa9.41□□□□□ -0.9
UPF3B-204ENST00000619445 ELANEP08246 267 aa9.41□□□□□ -0.9
UPF3B-204ENST00000619445 OR5H8P0DN80 308 aa9.41□□□□□ -0.9
UPF3B-204ENST00000619445 IGFBP3P17936 291 aaPredicted RBP9.41□□□□□ -0.9
UPF3B-204ENST00000619445 FSTP19883 344 aa9.41□□□□□ -0.9
UPF3B-204ENST00000619445 ETV1P50549 477 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms