RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 HIST1H1CP16403 213 aaKnown RBP7.11□□□□□ -1.27
GPC6-202ENST00000617456 ZNF823P16415 610 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 CPEP16870 476 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 HLA-GP17693 338 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 S100A2P29034 98 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 GNRHRP30968 328 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 KRTAP10-3P60369 221 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 PPP3R1P63098 170 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 MZT1Q08AG7 82 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 ARL6IP1Q15041 203 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 FCN2Q15485 313 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 RSPO1Q2MKA7 263 aaPredicted RBP7.11□□□□□ -1.27
GPC6-202ENST00000617456 KLHL22Q53GT1 634 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 ARSJQ5FYB0 599 aaPredicted RBP7.11□□□□□ -1.27
GPC6-202ENST00000617456 ZNF770Q6IQ21 691 aaPredicted RBP7.11□□□□□ -1.27
GPC6-202ENST00000617456 PGBD2Q6P3X8 592 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 DRAM2Q6UX65 266 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 C9orf139Q6ZV77 190 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 LYG2Q86SG7 212 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 CATSPERDQ86XM0 798 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 ZDHHC21Q8IVQ6 265 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 BAP18Q8IXM2 172 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 RNF148Q8N7C7 305 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 CCDC71LQ8N9Z2 235 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 OR10S1Q8NGN2 331 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 OR4Q3Q8NH05 313 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 GHSRQ92847 366 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 SPTSSAQ969W0 71 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 SPSB4Q96A44 273 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 NMNAT3Q96T66 252 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 PHB2Q99623 299 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 PITX2Q99697 317 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 ATF6BQ99941 703 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 ALG8Q9BVK2 526 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 SNHG12Q9BXW3 62 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 PKIBQ9C010 78 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 RGCCQ9H4X1 137 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 DUSP21Q9H596 190 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 RBFOX1Q9NWB1 397 aaKnown RBP7.11□□□□□ -1.27
GPC6-202ENST00000617456 GAR1Q9NY12 217 aaKnown RBP7.11□□□□□ -1.27
GPC6-202ENST00000617456 SCN3BQ9NY72 215 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 VNN3Q9NY84 501 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 RASL12Q9NYN1 266 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 C1RLQ9NZP8 487 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 POLR1DQ9Y2S0 133 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 TNFRSF18Q9Y5U5 241 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 CDH10Q9Y6N8 788 aa7.11□□□□□ -1.27
GPC6-202ENST00000617456 A0A1W2PRV1 198 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 ARRDC5A6NEK1 342 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 SLC22A31A6NKX4 558 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 CEACAM18A8MTB9 384 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 SRRM5B3KS81 715 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 SEC14L6B5MCN3 397 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 TNFRSF11BO00300 401 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 DIRAS1O95057 198 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 ZNF205O95201 554 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 TSPAN15O95858 294 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 WNT2P09544 360 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 NPY4RP50391 375 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 SLC25A1P53007 311 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 PTTG1IPP53801 180 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 RELBQ01201 579 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 DEFA5Q01523 94 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 PEA15Q15121 130 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 ASPHD2Q6ICH7 369 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 LCN8Q6JVE9 175 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 COMMD2Q86X83 199 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 FAM58AQ8N1B3 248 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 CBR4Q8N4T8 237 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 OR2T33Q8NG76 320 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 OR51D1Q8NGF3 324 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 OR4K13Q8NH42 304 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 OR1S1Q8NH92 325 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 C2CD4CQ8TF44 421 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 ORAOV1Q8WV07 137 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 ITLN1Q8WWA0 313 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 ASB13Q8WXK3 278 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 RGP1Q92546 391 aaPredicted RBP7.1□□□□□ -1.27
GPC6-202ENST00000617456 UPRTQ96BW1 309 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 SAT2Q96F10 170 aaPredicted RBP7.1□□□□□ -1.27
GPC6-202ENST00000617456 TSSK2Q96PF2 358 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 THAP7Q9BT49 309 aaPredicted RBP7.1□□□□□ -1.27
GPC6-202ENST00000617456 SSBP3Q9BWW4 388 aaPredicted RBP7.1□□□□□ -1.27
GPC6-202ENST00000617456 CHIAQ9BZP6 476 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 RERGLQ9H628 205 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 PNRC2Q9NPJ4 139 aaKnown RBP7.1□□□□□ -1.27
GPC6-202ENST00000617456 SMCO4Q9NRQ5 59 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 MRPL15Q9P015 296 aaKnown RBP7.1□□□□□ -1.27
GPC6-202ENST00000617456 GSKIPQ9P0R6 139 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 MGAT4CQ9UBM8 478 aa7.1□□□□□ -1.27
GPC6-202ENST00000617456 IGHV2-70DA0A0C4DH43 119 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 FAM230AA0A1W2PPH8 454 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 M0R135 149 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 EREGO14944 169 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 NDUFA7O95182 113 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 FADS2O95864 444 aaKnown RBP7.09□□□□□ -1.27
GPC6-202ENST00000617456 SERPINA3P01011 423 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 DBHP09172 617 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 CALCBP10092 127 aa7.09□□□□□ -1.27
GPC6-202ENST00000617456 GTF2F2P13984 249 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms