RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 TINAGL1Q9GZM7 467 aaPredicted RBP6.64□□□□□ -1.35
PCDH9-205ENST00000614931 CHMP1AQ9HD42 196 aaPredicted RBP6.64□□□□□ -1.35
PCDH9-205ENST00000614931 YAE1D1Q9NRH1 226 aa6.64□□□□□ -1.35
PCDH9-205ENST00000614931 C19orf12Q9NSK7 152 aa6.64□□□□□ -1.35
PCDH9-205ENST00000614931 MBNL3Q9NUK0 354 aaKnown RBP6.64□□□□□ -1.35
PCDH9-205ENST00000614931 SLC25A10Q9UBX3 287 aaPredicted RBP6.64□□□□□ -1.35
PCDH9-205ENST00000614931 MEIKINA0A087WXM9 373 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 IGHV4-61A0A0C4DH41 118 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 IGKV1-6A0A0C4DH72 117 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 ODAMA1E959 279 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 A8MV72 311 aaPredicted RBP6.63□□□□□ -1.35
PCDH9-205ENST00000614931 C22orf46C9J442 243 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 H3BUI4 141 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 M0QYG6 137 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 NDUFA2O43678 99 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 RBBP9O75884 186 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 CD74P04233 296 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 CD3DP04234 171 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 ZNF735P0CB33 412 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 GSTT2P0CG29 244 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 GSTT2BP0CG30 244 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 CGB3P0DN86 165 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 CGB7P0DN87 165 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 IGHV4-31P0DP07 118 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 NDUFB7P17568 137 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 HLA-DMAP28067 261 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 ERP29P30040 261 aaKnown RBP6.63□□□□□ -1.35
PCDH9-205ENST00000614931 HIVEP2P31629 2446 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 GLP1RP43220 463 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 CBX5P45973 191 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 KCNJ3P48549 501 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 EDDM3BP56851 147 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 HLA-DRB3P79483 266 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 DCTN2Q13561 401 aaKnown RBP6.63□□□□□ -1.35
PCDH9-205ENST00000614931 ZNF273Q14593 569 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 HMGN3Q15651 99 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 UTF1Q5T230 341 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 WDR25Q64LD2 544 aaPredicted RBP6.63□□□□□ -1.35
PCDH9-205ENST00000614931 ZNF57Q68EA5 555 aaPredicted RBP6.63□□□□□ -1.35
PCDH9-205ENST00000614931 CYB5R2Q6BCY4 276 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 Q6ZS49 121 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 SPICQ8N5J4 248 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 TMEM229BQ8NBD8 167 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 BEST4Q8NFU0 473 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 OR4C16Q8NGL9 310 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 OR1L1Q8NH94 360 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 PPP1R35Q8TAP8 253 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 MRGPRDQ8TDS7 321 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 ZFAND2BQ8WV99 257 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 NEIL1Q96FI4 390 aaPredicted RBP6.63□□□□□ -1.35
PCDH9-205ENST00000614931 PIMREGQ9BSJ6 248 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 C11orf54Q9H0W9 315 aaPredicted RBP6.63□□□□□ -1.35
PCDH9-205ENST00000614931 FAM234AQ9H0X4 552 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 IFT46Q9NQC8 304 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 MIOXQ9UGB7 285 aa6.63□□□□□ -1.35
PCDH9-205ENST00000614931 CSPG4Q6UVK1 2322 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 C12orf77C9JDV5 145 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 C15orf65H3BRN8 121 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 SDCBPO00560 298 aaPredicted RBP6.62□□□□□ -1.35
PCDH9-205ENST00000614931 PHF1O43189 567 aaPredicted RBP6.62□□□□□ -1.35
PCDH9-205ENST00000614931 NDUFB3O43676 98 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 PMP2P02689 132 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 SCTP09683 121 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 SPNP16150 400 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 CCL3L1P16619 93 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 ZFP36P26651 326 aaKnown RBP6.62□□□□□ -1.35
PCDH9-205ENST00000614931 SSTR5P35346 364 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 HRH1P35367 487 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 DLX6P56179 175 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 ERVFRD-1P60508 538 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 ACTBP60709 375 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 ACTG1P63261 375 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 SSBP1Q04837 148 aaKnown RBP6.62□□□□□ -1.35
PCDH9-205ENST00000614931 ASAH1Q13510 395 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 KCNJ8Q15842 424 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 C17orf58Q2M2W7 97 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 LRRC10Q5BKY1 277 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 IGSF11Q5DX21 431 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 C16orf87Q6PH81 154 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 GDPD3Q7L5L3 318 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 MOB1BQ7L9L4 216 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 GLCCI1Q86VQ1 547 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 TOMM5Q8N4H5 51 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 OR8B3Q8NGG8 313 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 OR5D13Q8NGL4 314 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 OR56B4Q8NH76 319 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 H1FXQ92522 213 aaKnown RBP6.62□□□□□ -1.35
PCDH9-205ENST00000614931 DACT3Q96B18 629 aaPredicted RBP6.62□□□□□ -1.35
PCDH9-205ENST00000614931 OR8B2Q96RD0 313 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 MDFIQ99750 246 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 SLC6A7Q99884 636 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 CABLES2Q9BTV7 478 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 NCOR1P1Q9H4R4 102 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 ZNF286AQ9HBT8 521 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 HRASLSQ9HDD0 168 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 PALMDQ9NP74 551 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 TMEM160Q9NX00 188 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 TRAPPC2LQ9UL33 140 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 NAV3Q8IVL0 2385 aa6.62□□□□□ -1.35
PCDH9-205ENST00000614931 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms