RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 HSD17B10Q99714 261 aaKnown RBP7.78□□□□□ -1.16
TTC28-208ENST00000612946 QTRT1Q9BXR0 403 aaKnown RBP7.78□□□□□ -1.16
TTC28-208ENST00000612946 LINC00597Q9H2U6 94 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 VSIG4Q9Y279 399 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 MYADML2A6NDP7 307 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 ATP6V0CP27449 155 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 HSF5Q4G112 596 aaPredicted RBP7.78□□□□□ -1.16
TTC28-208ENST00000612946 LY75O60449 1722 aa7.77□□□□□ -1.16
TTC28-208ENST00000612946 HCRTO43612 131 aa7.77□□□□□ -1.16
TTC28-208ENST00000612946 COL8A1P27658 744 aa7.77□□□□□ -1.16
TTC28-208ENST00000612946 ROM1Q03395 351 aa7.77□□□□□ -1.16
TTC28-208ENST00000612946 CIRBPQ14011 172 aaKnown RBP7.77□□□□□ -1.16
TTC28-208ENST00000612946 SFXN3Q9BWM7 321 aa7.77□□□□□ -1.16
TTC28-208ENST00000612946 PARLQ9H300 379 aa7.77□□□□□ -1.16
TTC28-208ENST00000612946 LOC285556D6RIA3 1793 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 LOC107984156A0A0G2JMH3 177 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 OOEPA6NGQ2 149 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 AKR7A3O95154 331 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 CFDP00746 253 aaPredicted RBP7.77□□□□□ -1.17
TTC28-208ENST00000612946 RPL30P62888 115 aaKnown RBP7.77□□□□□ -1.17
TTC28-208ENST00000612946 WDR25Q64LD2 544 aaPredicted RBP7.77□□□□□ -1.17
TTC28-208ENST00000612946 ARL17AQ8IVW1 177 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 TNFRSF14Q92956 283 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 SLC52A3Q9NQ40 469 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 THYN1Q9P016 225 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 CYSLTR1Q9Y271 337 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 MEX3AA1L020 520 aaKnown RBP7.77□□□□□ -1.17
TTC28-208ENST00000612946 SBK3P0C264 359 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 TNFSF10P50591 281 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 PRICKLE4Q2TBC4 344 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 THOC3Q96J01 351 aaKnown RBP7.77□□□□□ -1.17
TTC28-208ENST00000612946 SMIM8Q96KF7 97 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 MRPL16Q9NX20 251 aaKnown RBP7.77□□□□□ -1.17
TTC28-208ENST00000612946 TRGV10A0A0A0MS01 117 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 A0A0A6YYD5 115 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 HS3ST1O14792 307 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 ENSAO43768 121 aaKnown RBP7.77□□□□□ -1.17
TTC28-208ENST00000612946 TRGC1P0CF51 173 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 FGF5P12034 268 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 SRSF4Q08170 494 aaKnown RBP7.77□□□□□ -1.17
TTC28-208ENST00000612946 MESTQ5EB52 335 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 PQLC2Q6ZP29 291 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 NT5CQ8TCD5 201 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 THAP3Q8WTV1 239 aaPredicted RBP7.77□□□□□ -1.17
TTC28-208ENST00000612946 GTF3AQ92664 365 aaKnown RBP7.77□□□□□ -1.17
TTC28-208ENST00000612946 PCGF1Q9BSM1 259 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 APOOQ9BUR5 198 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 RNF224P0DH78 156 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 PRNDQ9UKY0 176 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 ALKAL1Q6UXT8 129 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 STARD5Q9NSY2 213 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 NCKAP5O14513 1909 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 A0A0A6YYC8 382 aaPredicted RBP7.77□□□□□ -1.17
TTC28-208ENST00000612946 I3L1I5 382 aaPredicted RBP7.77□□□□□ -1.17
TTC28-208ENST00000612946 DLEU1O43261 78 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 TCF24Q7RTU0 167 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 PRDM13Q9H4Q3 707 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 MFAP2P55001 183 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 MRGPREQ86SM8 312 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 PHF3Q92576 2039 aaKnown RBP7.77□□□□□ -1.17
TTC28-208ENST00000612946 CREBBPQ92793 2442 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 GHRHP01286 108 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 OR4A8P0C604 315 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 RTN4RL1Q86UN2 441 aaPredicted RBP7.77□□□□□ -1.17
TTC28-208ENST00000612946 DUSP13Q9UII6 198 aa7.77□□□□□ -1.17
TTC28-208ENST00000612946 OR2J3O76001 311 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 TM4SF1P30408 202 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 LPAR6P43657 344 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 SELENOTP62341 195 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 SSX8Q7RTT4 187 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 GBGT1Q8N5D6 347 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 ICAM5Q9UMF0 924 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 OR4C45A6NMZ5 311 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 CD46P15529 392 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 C5orf17Q8NAS9 161 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 RELTQ969Z4 430 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 MMP25Q9NPA2 562 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 TBL2Q9Y4P3 447 aaKnown RBP7.76□□□□□ -1.17
TTC28-208ENST00000612946 CD74P04233 296 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 OR1F12Q8NHA8 337 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 SNRNP40Q96DI7 357 aaKnown RBP7.76□□□□□ -1.17
TTC28-208ENST00000612946 PTGESO14684 152 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 ITGB1BP1O14713 200 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 PSME4Q14997 1843 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 C7orf71A4D174 169 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 CD1BP29016 333 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 TBC1D26Q86UD7 250 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 ZNF257Q9Y2Q1 563 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 OR4C46A6NHA9 309 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 DNASE2O00115 360 aaPredicted RBP7.76□□□□□ -1.17
TTC28-208ENST00000612946 PMELP40967 661 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 SRYQ05066 204 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 DENND4AQ7Z401 1863 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 KCNMB1Q16558 191 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 Q6AWC8 147 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 FBXL14Q8N1E6 418 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 OR10V1Q8NGI7 309 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 PPP2CAP67775 309 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 C11orf40Q8WZ69 217 aa7.76□□□□□ -1.17
TTC28-208ENST00000612946 GRAMD2BQ96HH9 432 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms