RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 BAG2O95816 211 aa14.03□□□□□ -0.16
SSBP1-215ENST00000612337 RBM11P57052 281 aaKnown RBP14.03□□□□□ -0.16
SSBP1-215ENST00000612337 SLC35B1P78383 322 aa14.03□□□□□ -0.16
SSBP1-215ENST00000612337 C18orf65Q6ZTR6 163 aa14.03□□□□□ -0.16
SSBP1-215ENST00000612337 C8orf86Q6ZUL3 223 aa14.03□□□□□ -0.16
SSBP1-215ENST00000612337 SLC35E3Q7Z769 313 aa14.03□□□□□ -0.16
SSBP1-215ENST00000612337 LINC00596Q86U02 117 aa14.03□□□□□ -0.16
SSBP1-215ENST00000612337 FOXRED2Q8IWF2 684 aa14.03□□□□□ -0.16
SSBP1-215ENST00000612337 OR52M1Q8NGK5 317 aa14.03□□□□□ -0.16
SSBP1-215ENST00000612337 MCRIP2Q9BUT9 160 aaKnown RBP14.03□□□□□ -0.16
SSBP1-215ENST00000612337 TMEM138Q9NPI0 162 aa14.03□□□□□ -0.16
SSBP1-215ENST00000612337 LINC00527Q9UJ94 153 aa14.03□□□□□ -0.16
SSBP1-215ENST00000612337 ING4Q9UNL4 249 aa14.03□□□□□ -0.16
SSBP1-215ENST00000612337 IGHV1-3A0A0C4DH29 117 aa14.02□□□□□ -0.17
SSBP1-215ENST00000612337 C15orf65H3BRN8 121 aa14.02□□□□□ -0.17
SSBP1-215ENST00000612337 CCRL2O00421 344 aa14.02□□□□□ -0.17
SSBP1-215ENST00000612337 GEMIN2O14893 280 aaKnown RBP14.02□□□□□ -0.17
SSBP1-215ENST00000612337 CSTBP04080 98 aaKnown RBP14.02□□□□□ -0.17
SSBP1-215ENST00000612337 GAPDHP04406 335 aaKnown RBP14.02□□□□□ -0.17
SSBP1-215ENST00000612337 ZNF93P35789 620 aaPredicted RBP14.02□□□□□ -0.17
SSBP1-215ENST00000612337 MYCNOSP40205 109 aa14.02□□□□□ -0.17
SSBP1-215ENST00000612337 PPP3R1P63098 170 aa14.02□□□□□ -0.17
SSBP1-215ENST00000612337 DDI2Q5TDH0 399 aa14.02□□□□□ -0.17
SSBP1-215ENST00000612337 XAF1Q6GPH4 301 aa14.02□□□□□ -0.17
SSBP1-215ENST00000612337 IZUMO1Q8IYV9 350 aa14.02□□□□□ -0.17
SSBP1-215ENST00000612337 STPG2Q8N412 459 aa14.02□□□□□ -0.17
SSBP1-215ENST00000612337 LINC00311Q8N616 119 aa14.02□□□□□ -0.17
SSBP1-215ENST00000612337 C8orf31Q8N9H6 132 aa14.02□□□□□ -0.17
SSBP1-215ENST00000612337 OR52N1Q8NH53 320 aa14.02□□□□□ -0.17
SSBP1-215ENST00000612337 P2RX4Q99571 388 aa14.02□□□□□ -0.17
SSBP1-215ENST00000612337 S100A13Q99584 98 aa14.02□□□□□ -0.17
SSBP1-215ENST00000612337 PAK1IP1Q9NWT1 392 aaPredicted RBP14.02□□□□□ -0.17
SSBP1-215ENST00000612337 NUDT19A8MXV4 375 aa14.01□□□□□ -0.17
SSBP1-215ENST00000612337 ZNF780AO75290 641 aaPredicted RBP14.01□□□□□ -0.17
SSBP1-215ENST00000612337 BDKRB2P30411 391 aa14.01□□□□□ -0.17
SSBP1-215ENST00000612337 MPV17LQ2QL34 196 aa14.01□□□□□ -0.17
SSBP1-215ENST00000612337 MOB3BQ86TA1 216 aa14.01□□□□□ -0.17
SSBP1-215ENST00000612337 TGIF2LXQ8IUE1 241 aa14.01□□□□□ -0.17
SSBP1-215ENST00000612337 Q8N6K4 173 aa14.01□□□□□ -0.17
SSBP1-215ENST00000612337 KLHL30-AS1Q8NEE0 82 aa14.01□□□□□ -0.17
SSBP1-215ENST00000612337 ARL11Q969Q4 196 aa14.01□□□□□ -0.17
SSBP1-215ENST00000612337 EAF1Q96JC9 268 aaPredicted RBP14.01□□□□□ -0.17
SSBP1-215ENST00000612337 GFOD1Q9NXC2 390 aa14.01□□□□□ -0.17
SSBP1-215ENST00000612337 NCBP2LA6PVI3 153 aaKnown RBP14□□□□□ -0.17
SSBP1-215ENST00000612337 AP4M1O00189 453 aa14□□□□□ -0.17
SSBP1-215ENST00000612337 SDCBPO00560 298 aaPredicted RBP14□□□□□ -0.17
SSBP1-215ENST00000612337 ORC5O43913 435 aa14□□□□□ -0.17
SSBP1-215ENST00000612337 WBP4O75554 376 aaKnown RBP14□□□□□ -0.17
SSBP1-215ENST00000612337 SERPINA2P20848 420 aa14□□□□□ -0.17
SSBP1-215ENST00000612337 DCKP27707 260 aa14□□□□□ -0.17
SSBP1-215ENST00000612337 REG1BP48304 166 aa14□□□□□ -0.17
SSBP1-215ENST00000612337 ETV1P50549 477 aa14□□□□□ -0.17
SSBP1-215ENST00000612337 SMN1Q16637 294 aaKnown RBP14□□□□□ -0.17
SSBP1-215ENST00000612337 C11orf87Q6NUJ2 197 aa14□□□□□ -0.17
SSBP1-215ENST00000612337 TMPRSS11AQ6ZMR5 421 aa14□□□□□ -0.17
SSBP1-215ENST00000612337 ZNF695Q8IW36 515 aa14□□□□□ -0.17
SSBP1-215ENST00000612337 OR2T10Q8NGZ9 312 aa14□□□□□ -0.17
SSBP1-215ENST00000612337 RDH12Q96NR8 316 aa14□□□□□ -0.17
SSBP1-215ENST00000612337 LIN7CQ9NUP9 197 aaKnown RBP14□□□□□ -0.17
SSBP1-215ENST00000612337 IGHV3-72A0A0B4J1Y9 119 aa13.99□□□□□ -0.17
SSBP1-215ENST00000612337 LINC01548A6NM66 108 aa13.99□□□□□ -0.17
SSBP1-215ENST00000612337 OGG1O15527 345 aa13.99□□□□□ -0.17
SSBP1-215ENST00000612337 IL3RAP26951 378 aa13.99□□□□□ -0.17
SSBP1-215ENST00000612337 GPR12P47775 334 aa13.99□□□□□ -0.17
SSBP1-215ENST00000612337 Q3ZCU0 254 aa13.99□□□□□ -0.17
SSBP1-215ENST00000612337 ATAD3CQ5T2N8 411 aa13.99□□□□□ -0.17
SSBP1-215ENST00000612337 OR2G6Q5TZ20 316 aa13.99□□□□□ -0.17
SSBP1-215ENST00000612337 TEX38Q6PEX7 206 aa13.99□□□□□ -0.17
SSBP1-215ENST00000612337 ZNF497Q6ZNH5 498 aa13.99□□□□□ -0.17
SSBP1-215ENST00000612337 CCDC107Q8WV48 283 aa13.99□□□□□ -0.17
SSBP1-215ENST00000612337 ST6GALNAC6Q969X2 333 aa13.99□□□□□ -0.17
SSBP1-215ENST00000612337 SMIM19Q96E16 107 aa13.99□□□□□ -0.17
SSBP1-215ENST00000612337 ABCG5Q9H222 651 aa13.99□□□□□ -0.17
SSBP1-215ENST00000612337 SMPD3Q9NY59 655 aaPredicted RBP13.99□□□□□ -0.17
SSBP1-215ENST00000612337 ZMAT5Q9UDW3 170 aaKnown RBP13.99□□□□□ -0.17
SSBP1-215ENST00000612337 SIRT4Q9Y6E7 314 aaPredicted RBP13.99□□□□□ -0.17
SSBP1-215ENST00000612337 H0YHG0 523 aa13.98□□□□□ -0.17
SSBP1-215ENST00000612337 MT-ND4P03905 459 aa13.98□□□□□ -0.17
SSBP1-215ENST00000612337 GTF2F2P13984 249 aa13.98□□□□□ -0.17
SSBP1-215ENST00000612337 IGFBP3P17936 291 aaPredicted RBP13.98□□□□□ -0.17
SSBP1-215ENST00000612337 CD1BP29016 333 aa13.98□□□□□ -0.17
SSBP1-215ENST00000612337 CD69Q07108 199 aa13.98□□□□□ -0.17
SSBP1-215ENST00000612337 RIPK1Q13546 671 aa13.98□□□□□ -0.17
SSBP1-215ENST00000612337 DCTN2Q13561 401 aaKnown RBP13.98□□□□□ -0.17
SSBP1-215ENST00000612337 PNLIPRP3Q17RR3 467 aa13.98□□□□□ -0.17
SSBP1-215ENST00000612337 SLC22A6Q4U2R8 563 aa13.98□□□□□ -0.17
SSBP1-215ENST00000612337 UNQ9370/PRO34162Q6UXP9 181 aa13.98□□□□□ -0.17
SSBP1-215ENST00000612337 Q8N9W7 124 aa13.98□□□□□ -0.17
SSBP1-215ENST00000612337 TMEM104Q8NE00 496 aa13.98□□□□□ -0.17
SSBP1-215ENST00000612337 ZNF555Q8NEP9 628 aa13.98□□□□□ -0.17
SSBP1-215ENST00000612337 UBALD1Q8TB05 177 aa13.98□□□□□ -0.17
SSBP1-215ENST00000612337 NEK7Q8TDX7 302 aa13.98□□□□□ -0.17
SSBP1-215ENST00000612337 RTN4IP1Q8WWV3 396 aaPredicted RBP13.98□□□□□ -0.17
SSBP1-215ENST00000612337 ORAI1Q96D31 301 aa13.98□□□□□ -0.17
SSBP1-215ENST00000612337 ZNF184Q99676 751 aaPredicted RBP13.98□□□□□ -0.17
SSBP1-215ENST00000612337 B9D2Q9BPU9 175 aa13.98□□□□□ -0.17
SSBP1-215ENST00000612337 GON7Q9BXV9 100 aa13.98□□□□□ -0.17
SSBP1-215ENST00000612337 BABAM2Q9NXR7 383 aa13.98□□□□□ -0.17
SSBP1-215ENST00000612337 IGHV3-43A0A0B4J1X8 118 aa13.97□□□□□ -0.17
SSBP1-215ENST00000612337 TRBV5-5A0A0J9YX44 114 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms