RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 USP9XQ93008 2570 aaPredicted RBP10.28□□□□□ -0.76
CBWD1-220ENST00000612045 MEIKINA0A087WXM9 373 aa10.28□□□□□ -0.76
CBWD1-220ENST00000612045 TRBV6-7A0A0A0MS04 114 aa10.28□□□□□ -0.76
CBWD1-220ENST00000612045 C9orf170A2RU37 121 aa10.28□□□□□ -0.76
CBWD1-220ENST00000612045 TMEM178BH3BS89 294 aa10.28□□□□□ -0.76
CBWD1-220ENST00000612045 K7N7A8 449 aa10.28□□□□□ -0.76
CBWD1-220ENST00000612045 PPYP01298 95 aa10.28□□□□□ -0.76
CBWD1-220ENST00000612045 CTSDP07339 412 aaPredicted RBP10.28□□□□□ -0.76
CBWD1-220ENST00000612045 ZNF728P0DKX0 622 aa10.28□□□□□ -0.76
CBWD1-220ENST00000612045 GLIPR1P48060 266 aa10.28□□□□□ -0.76
CBWD1-220ENST00000612045 EIF2B2P49770 351 aaKnown RBP10.28□□□□□ -0.76
CBWD1-220ENST00000612045 HERV-K104P61576 105 aa10.28□□□□□ -0.76
CBWD1-220ENST00000612045 IL13RA1P78552 427 aa10.28□□□□□ -0.76
CBWD1-220ENST00000612045 HMGN3Q15651 99 aa10.28□□□□□ -0.76
CBWD1-220ENST00000612045 LYG2Q86SG7 212 aa10.28□□□□□ -0.76
CBWD1-220ENST00000612045 ZNF561Q8N587 486 aa10.28□□□□□ -0.76
CBWD1-220ENST00000612045 SPICQ8N5J4 248 aa10.28□□□□□ -0.76
CBWD1-220ENST00000612045 UXS1Q8NBZ7 420 aa10.28□□□□□ -0.76
CBWD1-220ENST00000612045 ZNRF1Q8ND25 227 aa10.28□□□□□ -0.76
CBWD1-220ENST00000612045 TOMM40LQ969M1 308 aa10.28□□□□□ -0.76
CBWD1-220ENST00000612045 SDSLQ96GA7 329 aa10.28□□□□□ -0.76
CBWD1-220ENST00000612045 VRK1Q99986 396 aaPredicted RBP10.28□□□□□ -0.76
CBWD1-220ENST00000612045 TAF9BQ9HBM6 251 aa10.28□□□□□ -0.76
CBWD1-220ENST00000612045 TMEM106BQ9NUM4 274 aa10.28□□□□□ -0.76
CBWD1-220ENST00000612045 C14orf166Q9Y224 244 aaKnown RBP10.28□□□□□ -0.76
CBWD1-220ENST00000612045 KIAA2026Q5HYC2 2103 aa10.27□□□□□ -0.76
CBWD1-220ENST00000612045 MGST3O14880 152 aa10.27□□□□□ -0.77
CBWD1-220ENST00000612045 TUSC2O75896 110 aa10.27□□□□□ -0.77
CBWD1-220ENST00000612045 DIRAS3O95661 229 aa10.27□□□□□ -0.77
CBWD1-220ENST00000612045 GYPAP02724 150 aa10.27□□□□□ -0.77
CBWD1-220ENST00000612045 VAMP1P23763 118 aa10.27□□□□□ -0.77
CBWD1-220ENST00000612045 PPOXP50336 477 aa10.27□□□□□ -0.77
CBWD1-220ENST00000612045 UCP3P55916 312 aa10.27□□□□□ -0.77
CBWD1-220ENST00000612045 EDDM3AQ14507 147 aa10.27□□□□□ -0.77
CBWD1-220ENST00000612045 PRR18Q8N4B5 295 aa10.27□□□□□ -0.77
CBWD1-220ENST00000612045 C12orf45Q8N5I9 185 aaPredicted RBP10.27□□□□□ -0.77
CBWD1-220ENST00000612045 TPRX1Q8N7U7 411 aa10.27□□□□□ -0.77
CBWD1-220ENST00000612045 OR2AK2Q8NG84 335 aa10.27□□□□□ -0.77
CBWD1-220ENST00000612045 OR10J5Q8NHC4 309 aa10.27□□□□□ -0.77
CBWD1-220ENST00000612045 ZFAND1Q8TCF1 268 aa10.27□□□□□ -0.77
CBWD1-220ENST00000612045 IL1F10Q8WWZ1 152 aa10.27□□□□□ -0.77
CBWD1-220ENST00000612045 CBLN4Q9NTU7 201 aa10.27□□□□□ -0.77
CBWD1-220ENST00000612045 KCNIP1Q9NZI2 227 aa10.27□□□□□ -0.77
CBWD1-220ENST00000612045 MGAT4CQ9UBM8 478 aa10.27□□□□□ -0.77
CBWD1-220ENST00000612045 TRAV38-1A0A0B4J264 116 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 IGHV1-69-2A0A0G2JMI3 117 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 A0A1W2PPR1 153 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 FAM172BPA6NC97 362 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 NPIPB11E5RHQ5 1161 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 LGALS8O00214 317 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 ANXA3P12429 323 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 ZNF788Q6ZQV5 615 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 SLC38A6Q8IZM9 456 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 MITD1Q8WV92 249 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 GAFA1Q96PS6 74 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 CCL13Q99616 98 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 ZNF436Q9C0F3 470 aaPredicted RBP10.26□□□□□ -0.77
CBWD1-220ENST00000612045 ZNF665Q9H7R5 613 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 FBXO9Q9UK97 447 aaPredicted RBP10.26□□□□□ -0.77
CBWD1-220ENST00000612045 DCHS2Q6V1P9 2916 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 SPTAN1Q13813 2472 aaKnown RBP10.26□□□□□ -0.77
CBWD1-220ENST00000612045 PPIAL4EA0A075B759 164 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 A0A1B0GW55 424 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 ODAMA1E959 279 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 C12orf77C9JDV5 145 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 PPIAL4DF5H284 164 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 DUS4LO95620 317 aaKnown RBP10.26□□□□□ -0.77
CBWD1-220ENST00000612045 CD8AP01732 235 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 SOD3P08294 240 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 DANCRP0C864 163 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 DUX4L2P0CJ85 424 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 DUX4L3P0CJ86 424 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 DUX4L4P0CJ87 422 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 DUX4L5P0CJ88 424 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 DUX4L6P0CJ89 424 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 DUX4L7P0CJ90 424 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 PPIAL4FP0DN26 164 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 SELLP14151 372 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 RPS2P15880 293 aaKnown RBP10.26□□□□□ -0.77
CBWD1-220ENST00000612045 CD34P28906 385 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 SUPT4H1P63272 117 aaKnown RBP10.26□□□□□ -0.77
CBWD1-220ENST00000612045 C2orf68Q2NKX9 166 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 ZFP69Q49AA0 526 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 C6orf183Q5T699 404 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 C11orf71Q6IPW1 123 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 DUX4L9Q6RFH8 374 aaPredicted RBP10.26□□□□□ -0.77
CBWD1-220ENST00000612045 OR5D13Q8NGL4 314 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 OR13A1Q8NGR1 328 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 UBALD1Q8TB05 177 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 MRGPRDQ8TDS7 321 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 PHB2Q99623 299 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 OR1A1Q9P1Q5 309 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 DUX4Q9UBX2 424 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 PPIAL4AQ9Y536 164 aa10.26□□□□□ -0.77
CBWD1-220ENST00000612045 TANC2Q9HCD6 1990 aa10.25□□□□□ -0.77
CBWD1-220ENST00000612045 RAI1Q7Z5J4 1906 aaPredicted RBP10.25□□□□□ -0.77
CBWD1-220ENST00000612045 SFT2D2O95562 160 aa10.25□□□□□ -0.77
CBWD1-220ENST00000612045 RNF224P0DH78 156 aa10.25□□□□□ -0.77
CBWD1-220ENST00000612045 P2RX3P56373 397 aa10.25□□□□□ -0.77
CBWD1-220ENST00000612045 PIGPP57054 158 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms