RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 PEX11BO96011 259 aa11.51□□□□□ -0.57
USP6NL-205ENST00000609104 VSTM2LQ96N03 204 aa11.51□□□□□ -0.57
USP6NL-205ENST00000609104 PPYP01298 95 aa11.51□□□□□ -0.57
USP6NL-205ENST00000609104 BTF3P20290 206 aaKnown RBP11.51□□□□□ -0.57
USP6NL-205ENST00000609104 EWSR1Q01844 656 aaKnown RBP eCLIP11.51□□□□□ -0.57
USP6NL-205ENST00000609104 OR8I2Q8N0Y5 310 aa11.51□□□□□ -0.57
USP6NL-205ENST00000609104 V9GYH0 126 aa11.51□□□□□ -0.57
USP6NL-205ENST00000609104 CCL28Q9NRJ3 127 aa11.51□□□□□ -0.57
USP6NL-205ENST00000609104 TPRP12270 2363 aaKnown RBP11.51□□□□□ -0.57
USP6NL-205ENST00000609104 NKX2-6A6NCS4 301 aa11.5□□□□□ -0.57
USP6NL-205ENST00000609104 M0R296 226 aa11.5□□□□□ -0.57
USP6NL-205ENST00000609104 SRSF5Q13243 272 aaKnown RBP11.5□□□□□ -0.57
USP6NL-205ENST00000609104 FAHD2BQ6P2I3 314 aaPredicted RBP11.5□□□□□ -0.57
USP6NL-205ENST00000609104 FAHD2AQ96GK7 314 aa11.5□□□□□ -0.57
USP6NL-205ENST00000609104 HMGA2P52926 109 aa11.5□□□□□ -0.57
USP6NL-205ENST00000609104 OR4A47Q6IF82 309 aa11.5□□□□□ -0.57
USP6NL-205ENST00000609104 SLC23A3Q6PIS1 610 aa11.5□□□□□ -0.57
USP6NL-205ENST00000609104 EAF1Q96JC9 268 aaPredicted RBP11.5□□□□□ -0.57
USP6NL-205ENST00000609104 OGG1O15527 345 aa11.5□□□□□ -0.57
USP6NL-205ENST00000609104 OR4D9Q8NGE8 314 aa11.5□□□□□ -0.57
USP6NL-205ENST00000609104 PITPNC1Q9UKF7 332 aa11.5□□□□□ -0.57
USP6NL-205ENST00000609104 SLC35B1P78383 322 aa11.5□□□□□ -0.57
USP6NL-205ENST00000609104 GPR61Q9BZJ8 451 aa11.5□□□□□ -0.57
USP6NL-205ENST00000609104 UQCRFS1P47985 274 aa11.5□□□□□ -0.57
USP6NL-205ENST00000609104 SKP2Q13309 424 aa11.5□□□□□ -0.57
USP6NL-205ENST00000609104 TMUB1Q9BVT8 246 aa11.5□□□□□ -0.57
USP6NL-205ENST00000609104 DMKNQ6E0U4 476 aaPredicted RBP11.5□□□□□ -0.57
USP6NL-205ENST00000609104 UBTD1Q9HAC8 227 aa11.5□□□□□ -0.57
USP6NL-205ENST00000609104 ZFP64Q9NPA5 681 aa11.5□□□□□ -0.57
USP6NL-205ENST00000609104 SLC52A3Q9NQ40 469 aa11.5□□□□□ -0.57
USP6NL-205ENST00000609104 CDIPTO14735 213 aa11.5□□□□□ -0.57
USP6NL-205ENST00000609104 CA2P00918 260 aa11.5□□□□□ -0.57
USP6NL-205ENST00000609104 SMIM6P0DI80 62 aa11.5□□□□□ -0.57
USP6NL-205ENST00000609104 CD99P14209 185 aa11.5□□□□□ -0.57
USP6NL-205ENST00000609104 SOX8P57073 446 aa11.5□□□□□ -0.57
USP6NL-205ENST00000609104 MRGPRGQ86SM5 289 aa11.5□□□□□ -0.57
USP6NL-205ENST00000609104 LSMEM1Q8N8F7 131 aa11.5□□□□□ -0.57
USP6NL-205ENST00000609104 SPANXN1Q5VSR9 72 aa11.5□□□□□ -0.57
USP6NL-205ENST00000609104 FSCN3Q9NQT6 498 aa11.5□□□□□ -0.57
USP6NL-205ENST00000609104 SIRT7Q9NRC8 400 aa11.5□□□□□ -0.57
USP6NL-205ENST00000609104 DIRC3C9JPN6 131 aa11.49□□□□□ -0.57
USP6NL-205ENST00000609104 CD226Q15762 336 aa11.49□□□□□ -0.57
USP6NL-205ENST00000609104 SMUG1Q53HV7 270 aa11.49□□□□□ -0.57
USP6NL-205ENST00000609104 GBGT1Q8N5D6 347 aa11.49□□□□□ -0.57
USP6NL-205ENST00000609104 VSTM2AQ8TAG5 236 aa11.49□□□□□ -0.57
USP6NL-205ENST00000609104 FAM222BQ8WU58 562 aa11.49□□□□□ -0.57
USP6NL-205ENST00000609104 MPC1Q9Y5U8 109 aa11.49□□□□□ -0.57
USP6NL-205ENST00000609104 F12P00748 615 aaPredicted RBP11.49□□□□□ -0.57
USP6NL-205ENST00000609104 ABLIM2Q6H8Q1 611 aa11.49□□□□□ -0.57
USP6NL-205ENST00000609104 ALS2Q96Q42 1657 aa11.49□□□□□ -0.57
USP6NL-205ENST00000609104 RCC1P18754 421 aaPredicted RBP11.49□□□□□ -0.57
USP6NL-205ENST00000609104 SRD5A2P31213 254 aa11.49□□□□□ -0.57
USP6NL-205ENST00000609104 PMELP40967 661 aa11.49□□□□□ -0.57
USP6NL-205ENST00000609104 COL19A1Q14993 1142 aa11.49□□□□□ -0.57
USP6NL-205ENST00000609104 OR8B3Q8NGG8 313 aa11.49□□□□□ -0.57
USP6NL-205ENST00000609104 OR4D11Q8NGI4 311 aa11.49□□□□□ -0.57
USP6NL-205ENST00000609104 MRPL24Q96A35 216 aaKnown RBP11.49□□□□□ -0.57
USP6NL-205ENST00000609104 OR8B2Q96RD0 313 aa11.49□□□□□ -0.57
USP6NL-205ENST00000609104 CLN8Q9UBY8 286 aa11.49□□□□□ -0.57
USP6NL-205ENST00000609104 RNASE1P07998 156 aaKnown RBP11.49□□□□□ -0.57
USP6NL-205ENST00000609104 HIST1H1EP10412 219 aaKnown RBP11.49□□□□□ -0.57
USP6NL-205ENST00000609104 PSG2P11465 335 aa11.49□□□□□ -0.57
USP6NL-205ENST00000609104 TMEM50BP56557 158 aa11.49□□□□□ -0.57
USP6NL-205ENST00000609104 SNRNP40Q96DI7 357 aaKnown RBP11.49□□□□□ -0.57
USP6NL-205ENST00000609104 IGLV3-16A0A075B6K0 115 aa11.49□□□□□ -0.57
USP6NL-205ENST00000609104 F2RL2O00254 374 aa11.49□□□□□ -0.57
USP6NL-205ENST00000609104 ZNF250P15622 560 aa11.49□□□□□ -0.57
USP6NL-205ENST00000609104 BRS3P32247 399 aa11.49□□□□□ -0.57
USP6NL-205ENST00000609104 MOGAT3Q86VF5 341 aa11.49□□□□□ -0.57
USP6NL-205ENST00000609104 TRA2AQ13595 282 aaKnown RBP eCLIP11.49□□□□□ -0.57
USP6NL-205ENST00000609104 MESTQ5EB52 335 aa11.49□□□□□ -0.57
USP6NL-205ENST00000609104 CDX4O14627 284 aaPredicted RBP11.49□□□□□ -0.57
USP6NL-205ENST00000609104 TAS2R60P59551 318 aa11.49□□□□□ -0.57
USP6NL-205ENST00000609104 ASB5Q8WWX0 329 aa11.49□□□□□ -0.57
USP6NL-205ENST00000609104 HARBI1Q96MB7 349 aa11.49□□□□□ -0.57
USP6NL-205ENST00000609104 COL22A1Q8NFW1 1626 aaPredicted RBP11.49□□□□□ -0.57
USP6NL-205ENST00000609104 AESQ08117 197 aa11.49□□□□□ -0.57
USP6NL-205ENST00000609104 NTN1O95631 604 aa11.48□□□□□ -0.57
USP6NL-205ENST00000609104 DEFB124Q8NES8 71 aa11.48□□□□□ -0.57
USP6NL-205ENST00000609104 RAB1CQ92928 201 aa11.48□□□□□ -0.57
USP6NL-205ENST00000609104 MMP9P14780 707 aa11.48□□□□□ -0.57
USP6NL-205ENST00000609104 RNFT1Q5M7Z0 435 aa11.48□□□□□ -0.57
USP6NL-205ENST00000609104 FFAR1O14842 300 aa11.48□□□□□ -0.57
USP6NL-205ENST00000609104 MGAT2Q10469 447 aa11.48□□□□□ -0.57
USP6NL-205ENST00000609104 DYNLRB2Q8TF09 96 aa11.48□□□□□ -0.57
USP6NL-205ENST00000609104 PTP4A1Q93096 173 aa11.48□□□□□ -0.57
USP6NL-205ENST00000609104 RBM38Q9H0Z9 239 aaKnown RBP11.48□□□□□ -0.57
USP6NL-205ENST00000609104 COMPP49747 757 aaPredicted RBP11.48□□□□□ -0.57
USP6NL-205ENST00000609104 RAC3P60763 192 aa11.48□□□□□ -0.57
USP6NL-205ENST00000609104 MIXL1Q9H2W2 232 aa11.48□□□□□ -0.57
USP6NL-205ENST00000609104 FAM74A7A6NL05 159 aa11.48□□□□□ -0.57
USP6NL-205ENST00000609104 UBE2V2Q15819 145 aa11.48□□□□□ -0.57
USP6NL-205ENST00000609104 CADM4Q8NFZ8 388 aa11.48□□□□□ -0.57
USP6NL-205ENST00000609104 FAM60AQ9NP50 221 aa11.48□□□□□ -0.57
USP6NL-205ENST00000609104 SAP30LQ9HAJ7 183 aa11.48□□□□□ -0.57
USP6NL-205ENST00000609104 VDAC1P21796 283 aa11.48□□□□□ -0.57
USP6NL-205ENST00000609104 ADIPOQQ15848 244 aa11.48□□□□□ -0.57
USP6NL-205ENST00000609104 TEPPQ6URK8 271 aa11.48□□□□□ -0.57
USP6NL-205ENST00000609104 C1QL3Q5VWW1 255 aa11.48□□□□□ -0.57
USP6NL-205ENST00000609104 ZNF343Q6P1L6 599 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms