RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 KLHL22Q53GT1 634 aa10.54□□□□□ -0.72
POLR2J3-219ENST00000608621 ZNF695Q8IW36 515 aa10.54□□□□□ -0.72
POLR2J3-219ENST00000608621 UBALD1Q8TB05 177 aa10.54□□□□□ -0.72
POLR2J3-219ENST00000608621 CCDC107Q8WV48 283 aa10.54□□□□□ -0.72
POLR2J3-219ENST00000608621 ARL11Q969Q4 196 aa10.54□□□□□ -0.72
POLR2J3-219ENST00000608621 METTL9Q9H1A3 318 aa10.54□□□□□ -0.72
POLR2J3-219ENST00000608621 MRPS18AQ9NVS2 196 aaKnown RBP10.54□□□□□ -0.72
POLR2J3-219ENST00000608621 LOC100130705A0A1B0GUX0 176 aa10.53□□□□□ -0.72
POLR2J3-219ENST00000608621 GEMIN2O14893 280 aaKnown RBP10.53□□□□□ -0.72
POLR2J3-219ENST00000608621 OR7C1O76099 320 aaPredicted RBP10.53□□□□□ -0.72
POLR2J3-219ENST00000608621 CSTBP04080 98 aaKnown RBP10.53□□□□□ -0.72
POLR2J3-219ENST00000608621 CD2P06729 351 aa10.53□□□□□ -0.72
POLR2J3-219ENST00000608621 LIMS3P0CW19 117 aa10.53□□□□□ -0.72
POLR2J3-219ENST00000608621 LIMS4P0CW20 117 aa10.53□□□□□ -0.72
POLR2J3-219ENST00000608621 PNLIPRP3Q17RR3 467 aa10.53□□□□□ -0.72
POLR2J3-219ENST00000608621 XAF1Q6GPH4 301 aa10.53□□□□□ -0.72
POLR2J3-219ENST00000608621 FAM53AQ6NSI3 398 aaPredicted RBP10.53□□□□□ -0.72
POLR2J3-219ENST00000608621 TEX38Q6PEX7 206 aa10.53□□□□□ -0.72
POLR2J3-219ENST00000608621 LINC00311Q8N616 119 aa10.53□□□□□ -0.72
POLR2J3-219ENST00000608621 OR52M1Q8NGK5 317 aa10.53□□□□□ -0.72
POLR2J3-219ENST00000608621 OR2T10Q8NGZ9 312 aa10.53□□□□□ -0.72
POLR2J3-219ENST00000608621 OR52N1Q8NH53 320 aa10.53□□□□□ -0.72
POLR2J3-219ENST00000608621 GPR148Q8TDV2 347 aa10.53□□□□□ -0.72
POLR2J3-219ENST00000608621 ORAI1Q96D31 301 aa10.53□□□□□ -0.72
POLR2J3-219ENST00000608621 RAX2Q96IS3 184 aa10.53□□□□□ -0.72
POLR2J3-219ENST00000608621 SLC29A1Q99808 456 aa10.53□□□□□ -0.72
POLR2J3-219ENST00000608621 ABCG5Q9H222 651 aa10.53□□□□□ -0.72
POLR2J3-219ENST00000608621 IFT22Q9H7X7 185 aa10.53□□□□□ -0.72
POLR2J3-219ENST00000608621 DCLRE1BQ9H816 532 aa10.53□□□□□ -0.72
POLR2J3-219ENST00000608621 RPL36Q9Y3U8 105 aaKnown RBP10.53□□□□□ -0.72
POLR2J3-219ENST00000608621 TENM3Q9P273 2699 aa10.52□□□□□ -0.72
POLR2J3-219ENST00000608621 IGHV3-43A0A0B4J1X8 118 aa10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 TMEM30CPA0ZSE6 113 aa10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 H0YHG0 523 aa10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 C15orf65H3BRN8 121 aa10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 CCL24O00175 119 aa10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 AP4M1O00189 453 aa10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 SDCBPO00560 298 aaPredicted RBP10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 RPLP1P05386 114 aaKnown RBP10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 IGHV3-43DP0DP04 118 aa10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 SERPINA2P20848 420 aa10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 ZNF93P35789 620 aaPredicted RBP10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 GPR12P47775 334 aa10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 RBM11P57052 281 aaKnown RBP10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 RAB25P57735 213 aa10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 DGCR2P98153 550 aa10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 NHLRC3Q5JS37 347 aa10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 ATAD3CQ5T2N8 411 aa10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 ZFP1Q6P2D0 407 aa10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 RPL22L1Q6P5R6 122 aaKnown RBP10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 LCNL1Q6ZST4 164 aa10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 TGIF2LXQ8IUE1 241 aa10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 Q8N6K4 173 aa10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 Q8N9W7 124 aa10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 TFAP2CQ92754 450 aa10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 TMEM106AQ96A25 262 aa10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 WWC2-AS2Q96NR7 200 aa10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 S100A13Q99584 98 aa10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 TMEM138Q9NPI0 162 aa10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 PLSCR3Q9NRY6 295 aa10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 LIN7CQ9NUP9 197 aaKnown RBP10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 IL36GQ9NZH8 169 aa10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 ZMAT5Q9UDW3 170 aaKnown RBP10.52□□□□□ -0.73
POLR2J3-219ENST00000608621 ZNF736B4DX44 427 aaPredicted RBP10.51□□□□□ -0.73
POLR2J3-219ENST00000608621 ORC5O43913 435 aa10.51□□□□□ -0.73
POLR2J3-219ENST00000608621 MT-ND4P03905 459 aa10.51□□□□□ -0.73
POLR2J3-219ENST00000608621 CD1BP29016 333 aa10.51□□□□□ -0.73
POLR2J3-219ENST00000608621 BDKRB2P30411 391 aa10.51□□□□□ -0.73
POLR2J3-219ENST00000608621 ETV1P50549 477 aa10.51□□□□□ -0.73
POLR2J3-219ENST00000608621 GPR50Q13585 617 aa10.51□□□□□ -0.73
POLR2J3-219ENST00000608621 CCDC58Q4VC31 144 aa10.51□□□□□ -0.73
POLR2J3-219ENST00000608621 DDI2Q5TDH0 399 aa10.51□□□□□ -0.73
POLR2J3-219ENST00000608621 IZUMO1Q8IYV9 350 aa10.51□□□□□ -0.73
POLR2J3-219ENST00000608621 NEK7Q8TDX7 302 aa10.51□□□□□ -0.73
POLR2J3-219ENST00000608621 APH1BQ8WW43 257 aa10.51□□□□□ -0.73
POLR2J3-219ENST00000608621 RTN4IP1Q8WWV3 396 aaPredicted RBP10.51□□□□□ -0.73
POLR2J3-219ENST00000608621 ST6GALNAC6Q969X2 333 aa10.51□□□□□ -0.73
POLR2J3-219ENST00000608621 RBMXL1Q96E39 390 aaKnown RBP10.51□□□□□ -0.73
POLR2J3-219ENST00000608621 C9orf16Q9BUW7 83 aa10.51□□□□□ -0.73
POLR2J3-219ENST00000608621 FGF20Q9NP95 211 aaPredicted RBP10.51□□□□□ -0.73
POLR2J3-219ENST00000608621 GFOD1Q9NXC2 390 aa10.51□□□□□ -0.73
POLR2J3-219ENST00000608621 SIRT4Q9Y6E7 314 aaPredicted RBP10.51□□□□□ -0.73
POLR2J3-219ENST00000608621 KMT2CQ8NEZ4 4911 aaKnown RBP10.51□□□□□ -0.73
POLR2J3-219ENST00000608621 A0A1W2PP11 408 aa10.5□□□□□ -0.73
POLR2J3-219ENST00000608621 RAMP3O60896 148 aa10.5□□□□□ -0.73
POLR2J3-219ENST00000608621 IL3RAP26951 378 aa10.5□□□□□ -0.73
POLR2J3-219ENST00000608621 CDX1P47902 265 aaPredicted RBP10.5□□□□□ -0.73
POLR2J3-219ENST00000608621 GP2P55259 537 aaKnown RBP10.5□□□□□ -0.73
POLR2J3-219ENST00000608621 PPP3R1P63098 170 aa10.5□□□□□ -0.73
POLR2J3-219ENST00000608621 DCTN2Q13561 401 aaKnown RBP10.5□□□□□ -0.73
POLR2J3-219ENST00000608621 KIR2DS1Q14954 304 aa10.5□□□□□ -0.73
POLR2J3-219ENST00000608621 SMN1Q16637 294 aaKnown RBP10.5□□□□□ -0.73
POLR2J3-219ENST00000608621 MPV17LQ2QL34 196 aa10.5□□□□□ -0.73
POLR2J3-219ENST00000608621 DEFB136Q30KP8 78 aa10.5□□□□□ -0.73
POLR2J3-219ENST00000608621 SLC22A6Q4U2R8 563 aa10.5□□□□□ -0.73
POLR2J3-219ENST00000608621 CXorf66Q5JRM2 361 aaPredicted RBP10.5□□□□□ -0.73
POLR2J3-219ENST00000608621 OR2G6Q5TZ20 316 aa10.5□□□□□ -0.73
POLR2J3-219ENST00000608621 ZNF497Q6ZNH5 498 aa10.5□□□□□ -0.73
POLR2J3-219ENST00000608621 LINC00596Q86U02 117 aa10.5□□□□□ -0.73
POLR2J3-219ENST00000608621 C8orf31Q8N9H6 132 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms