RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 OR4K15Q8NH41 348 aa13.05□□□□□ -0.32
PPFIA3-213ENST00000602905 ZNF596Q8TC21 504 aa13.05□□□□□ -0.32
PPFIA3-213ENST00000602905 SSMEM1Q8WWF3 244 aa13.05□□□□□ -0.32
PPFIA3-213ENST00000602905 ARL11Q969Q4 196 aa13.05□□□□□ -0.32
PPFIA3-213ENST00000602905 PTX4Q96A99 478 aa13.05□□□□□ -0.32
PPFIA3-213ENST00000602905 FAAP24Q9BTP7 215 aa13.05□□□□□ -0.32
PPFIA3-213ENST00000602905 FUNDC2Q9BWH2 189 aa13.05□□□□□ -0.32
PPFIA3-213ENST00000602905 DPAGT1Q9H3H5 408 aa13.05□□□□□ -0.32
PPFIA3-213ENST00000602905 PRDM13Q9H4Q3 707 aa13.05□□□□□ -0.32
PPFIA3-213ENST00000602905 CHMP1AQ9HD42 196 aaPredicted RBP13.05□□□□□ -0.32
PPFIA3-213ENST00000602905 TBL2Q9Y4P3 447 aaKnown RBP13.05□□□□□ -0.32
PPFIA3-213ENST00000602905 ATRQ13535 2644 aa13.05□□□□□ -0.32
PPFIA3-213ENST00000602905 TRAV39A0A0B4J263 110 aa13.04□□□□□ -0.32
PPFIA3-213ENST00000602905 DNAJC9-AS1A6NH13 148 aa13.04□□□□□ -0.32
PPFIA3-213ENST00000602905 LDLRAD4O15165 306 aa13.04□□□□□ -0.32
PPFIA3-213ENST00000602905 SOCS1O15524 211 aa13.04□□□□□ -0.32
PPFIA3-213ENST00000602905 SPINT2O43291 252 aa13.04□□□□□ -0.32
PPFIA3-213ENST00000602905 HOXA3O43365 443 aaPredicted RBP13.04□□□□□ -0.32
PPFIA3-213ENST00000602905 TMEM127O75204 238 aa13.04□□□□□ -0.32
PPFIA3-213ENST00000602905 MMP23AO75900 390 aa13.04□□□□□ -0.32
PPFIA3-213ENST00000602905 CGB3P0DN86 165 aa13.04□□□□□ -0.32
PPFIA3-213ENST00000602905 CGB7P0DN87 165 aa13.04□□□□□ -0.32
PPFIA3-213ENST00000602905 SLC2A2P11168 524 aaPredicted RBP13.04□□□□□ -0.32
PPFIA3-213ENST00000602905 MRPS15P82914 257 aaKnown RBP13.04□□□□□ -0.32
PPFIA3-213ENST00000602905 SRSF2Q01130 221 aaKnown RBP13.04□□□□□ -0.32
PPFIA3-213ENST00000602905 LTC4SQ16873 150 aa13.04□□□□□ -0.32
PPFIA3-213ENST00000602905 IDNKQ5T6J7 187 aa13.04□□□□□ -0.32
PPFIA3-213ENST00000602905 ZNF626Q68DY1 528 aa13.04□□□□□ -0.32
PPFIA3-213ENST00000602905 GPR141Q7Z602 305 aa13.04□□□□□ -0.32
PPFIA3-213ENST00000602905 NR2C2APQ86WQ0 139 aa13.04□□□□□ -0.32
PPFIA3-213ENST00000602905 TMEM86BQ8N661 226 aa13.04□□□□□ -0.32
PPFIA3-213ENST00000602905 ZDHHC22Q8N966 263 aa13.04□□□□□ -0.32
PPFIA3-213ENST00000602905 NDNFQ8TB73 568 aa13.04□□□□□ -0.32
PPFIA3-213ENST00000602905 SULT4A1Q9BR01 284 aa13.04□□□□□ -0.32
PPFIA3-213ENST00000602905 RIMS4Q9H426 269 aaPredicted RBP13.04□□□□□ -0.32
PPFIA3-213ENST00000602905 HSF4Q9ULV5 492 aa13.04□□□□□ -0.32
PPFIA3-213ENST00000602905 POMT1Q9Y6A1 747 aa13.04□□□□□ -0.32
PPFIA3-213ENST00000602905 A0A0A6YYD4 124 aa13.03□□□□□ -0.32
PPFIA3-213ENST00000602905 A0A0B4J203 849 aa13.03□□□□□ -0.32
PPFIA3-213ENST00000602905 NPIPB11E5RHQ5 1161 aa13.03□□□□□ -0.32
PPFIA3-213ENST00000602905 MELTFP08582 738 aa13.03□□□□□ -0.32
PPFIA3-213ENST00000602905 CLEC2LP0C7M8 214 aa13.03□□□□□ -0.32
PPFIA3-213ENST00000602905 SSTR5P35346 364 aa13.03□□□□□ -0.32
PPFIA3-213ENST00000602905 UBA52P62987 128 aaKnown RBP13.03□□□□□ -0.32
PPFIA3-213ENST00000602905 SLC9A3R2Q15599 337 aa13.03□□□□□ -0.32
PPFIA3-213ENST00000602905 MINOS1Q5TGZ0 78 aa13.03□□□□□ -0.32
PPFIA3-213ENST00000602905 LDLRAD3Q86YD5 345 aa13.03□□□□□ -0.32
PPFIA3-213ENST00000602905 BEND2Q8NDZ0 799 aa13.03□□□□□ -0.32
PPFIA3-213ENST00000602905 RFESDQ8TAC1 157 aa13.03□□□□□ -0.32
PPFIA3-213ENST00000602905 FAM216AQ8WUB2 273 aa13.03□□□□□ -0.32
PPFIA3-213ENST00000602905 DYRK2Q92630 601 aa13.03□□□□□ -0.32
PPFIA3-213ENST00000602905 CREB3L1Q96BA8 519 aa13.03□□□□□ -0.32
PPFIA3-213ENST00000602905 MALSU1Q96EH3 234 aa13.03□□□□□ -0.32
PPFIA3-213ENST00000602905 KIRREL1Q96J84 757 aa13.03□□□□□ -0.32
PPFIA3-213ENST00000602905 DUX5Q96PT3 197 aa13.03□□□□□ -0.32
PPFIA3-213ENST00000602905 ATG5Q9H1Y0 275 aa13.03□□□□□ -0.32
PPFIA3-213ENST00000602905 LINC00574Q9H8X3 128 aa13.03□□□□□ -0.32
PPFIA3-213ENST00000602905 ESM1Q9NQ30 184 aa13.03□□□□□ -0.32
PPFIA3-213ENST00000602905 MINOS1-NBL1R4GNA1 71 aa13.03□□□□□ -0.32
PPFIA3-213ENST00000602905 CUBNO60494 3623 aa13.02□□□□□ -0.33
PPFIA3-213ENST00000602905 FAM172BPA6NC97 362 aa13.02□□□□□ -0.33
PPFIA3-213ENST00000602905 ODF3BA8MYP8 253 aa13.02□□□□□ -0.33
PPFIA3-213ENST00000602905 CLDN34H7C241 214 aa13.02□□□□□ -0.33
PPFIA3-213ENST00000602905 SCGNO76038 276 aa13.02□□□□□ -0.33
PPFIA3-213ENST00000602905 HTR1DP28221 377 aa13.02□□□□□ -0.33
PPFIA3-213ENST00000602905 CD34P28906 385 aa13.02□□□□□ -0.33
PPFIA3-213ENST00000602905 SCAND1P57086 179 aa13.02□□□□□ -0.33
PPFIA3-213ENST00000602905 ARL6IP1Q15041 203 aa13.02□□□□□ -0.33
PPFIA3-213ENST00000602905 TMEM30BQ3MIR4 351 aa13.02□□□□□ -0.33
PPFIA3-213ENST00000602905 SLC16A12Q6ZSM3 486 aa13.02□□□□□ -0.33
PPFIA3-213ENST00000602905 ZNF554Q86TJ5 538 aa13.02□□□□□ -0.33
PPFIA3-213ENST00000602905 GAPTQ8N292 157 aa13.02□□□□□ -0.33
PPFIA3-213ENST00000602905 OR9G1Q8NH87 305 aa13.02□□□□□ -0.33
PPFIA3-213ENST00000602905 SETD6Q8TBK2 473 aa13.02□□□□□ -0.33
PPFIA3-213ENST00000602905 MRPL30Q8TCC3 161 aaKnown RBP13.02□□□□□ -0.33
PPFIA3-213ENST00000602905 PHF21AQ96BD5 680 aa13.02□□□□□ -0.33
PPFIA3-213ENST00000602905 RAB3CQ96E17 227 aa13.02□□□□□ -0.33
PPFIA3-213ENST00000602905 ARHGAP5-AS1Q96IT6 56 aa13.02□□□□□ -0.33
PPFIA3-213ENST00000602905 PECRQ9BY49 303 aa13.02□□□□□ -0.33
PPFIA3-213ENST00000602905 TNFRSF19Q9NS68 423 aa13.02□□□□□ -0.33
PPFIA3-213ENST00000602905 ZNRD1Q9P1U0 126 aa13.02□□□□□ -0.33
PPFIA3-213ENST00000602905 AMMECR1Q9Y4X0 333 aaPredicted RBP13.02□□□□□ -0.33
PPFIA3-213ENST00000602905 A0A087X0M5 115 aa13.01□□□□□ -0.33
PPFIA3-213ENST00000602905 A0A1B0GX30 115 aa13.01□□□□□ -0.33
PPFIA3-213ENST00000602905 SDCBPO00560 298 aaPredicted RBP13.01□□□□□ -0.33
PPFIA3-213ENST00000602905 SNRPBP14678 240 aaKnown RBP13.01□□□□□ -0.33
PPFIA3-213ENST00000602905 GDNFP39905 211 aa13.01□□□□□ -0.33
PPFIA3-213ENST00000602905 CEACAM3P40198 252 aa13.01□□□□□ -0.33
PPFIA3-213ENST00000602905 IER3P46695 156 aa13.01□□□□□ -0.33
PPFIA3-213ENST00000602905 SERPINB10P48595 397 aa13.01□□□□□ -0.33
PPFIA3-213ENST00000602905 ARHGDIBP52566 201 aa13.01□□□□□ -0.33
PPFIA3-213ENST00000602905 KRTAP24-1Q3LI83 254 aa13.01□□□□□ -0.33
PPFIA3-213ENST00000602905 MOB1BQ7L9L4 216 aa13.01□□□□□ -0.33
PPFIA3-213ENST00000602905 LHFPL4Q7Z7J7 247 aa13.01□□□□□ -0.33
PPFIA3-213ENST00000602905 ANKRD13BQ86YJ7 626 aa13.01□□□□□ -0.33
PPFIA3-213ENST00000602905 PRR18Q8N4B5 295 aa13.01□□□□□ -0.33
PPFIA3-213ENST00000602905 OR52M1Q8NGK5 317 aa13.01□□□□□ -0.33
PPFIA3-213ENST00000602905 OR10R2Q8NGX6 335 aa13.01□□□□□ -0.33
PPFIA3-213ENST00000602905 OR5R1Q8NH85 324 aa13.01□□□□□ -0.33
PPFIA3-213ENST00000602905 CMSS1Q9BQ75 279 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms