RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 F8P00451 2351 aa8.41□□□□□ -1.06
UPF1-213ENST00000601981 A0A096LNT2 108 aa8.4□□□□□ -1.06
UPF1-213ENST00000601981 OR2AT4A6NND4 320 aa8.4□□□□□ -1.06
UPF1-213ENST00000601981 CEACAM18A8MTB9 384 aa8.4□□□□□ -1.06
UPF1-213ENST00000601981 B4DSR2 109 aa8.4□□□□□ -1.06
UPF1-213ENST00000601981 ADAM20O43506 726 aa8.4□□□□□ -1.06
UPF1-213ENST00000601981 FOXH1O75593 365 aa8.4□□□□□ -1.06
UPF1-213ENST00000601981 PMP2P02689 132 aa8.4□□□□□ -1.06
UPF1-213ENST00000601981 FCGR3AP08637 254 aa8.4□□□□□ -1.06
UPF1-213ENST00000601981 EGR1P18146 543 aa8.4□□□□□ -1.06
UPF1-213ENST00000601981 ANXA7P20073 488 aaKnown RBP8.4□□□□□ -1.06
UPF1-213ENST00000601981 GNB2P62879 340 aa8.4□□□□□ -1.06
UPF1-213ENST00000601981 IKZF1Q13422 519 aa8.4□□□□□ -1.06
UPF1-213ENST00000601981 SRSF7Q16629 238 aaKnown RBP eCLIP8.4□□□□□ -1.06
UPF1-213ENST00000601981 SCGB2B2Q4G0G5 96 aa8.4□□□□□ -1.06
UPF1-213ENST00000601981 FAM201AQ5SY85 155 aa8.4□□□□□ -1.06
UPF1-213ENST00000601981 ATAD3CQ5T2N8 411 aa8.4□□□□□ -1.06
UPF1-213ENST00000601981 CYB5R2Q6BCY4 276 aa8.4□□□□□ -1.06
UPF1-213ENST00000601981 ACP7Q6ZNF0 438 aa8.4□□□□□ -1.06
UPF1-213ENST00000601981 TMEM17Q86X19 198 aa8.4□□□□□ -1.06
UPF1-213ENST00000601981 TCTE3Q8IZS6 198 aa8.4□□□□□ -1.06
UPF1-213ENST00000601981 LINC01356Q8N9X3 169 aa8.4□□□□□ -1.06
UPF1-213ENST00000601981 MAPK1IP1LQ8NDC0 245 aa8.4□□□□□ -1.06
UPF1-213ENST00000601981 OR5AP2Q8NGF4 316 aa8.4□□□□□ -1.06
UPF1-213ENST00000601981 CCDC107Q8WV48 283 aa8.4□□□□□ -1.06
UPF1-213ENST00000601981 DACT3Q96B18 629 aaPredicted RBP8.4□□□□□ -1.06
UPF1-213ENST00000601981 CYYR1Q96J86 154 aa8.4□□□□□ -1.06
UPF1-213ENST00000601981 ZNF488Q96MN9 340 aa8.4□□□□□ -1.06
UPF1-213ENST00000601981 ST6GALNAC5Q9BVH7 336 aa8.4□□□□□ -1.06
UPF1-213ENST00000601981 CLN8Q9UBY8 286 aa8.4□□□□□ -1.06
UPF1-213ENST00000601981 ACANP16112 2415 aa8.4□□□□□ -1.07
UPF1-213ENST00000601981 MALRD1Q5VYJ5 2156 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 IGHV3OR15-7A0A075B7D8 119 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 TMEM82A0PJX8 343 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 WNT9BO14905 357 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 TMPRSS2O15393 492 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 CREBL2O60519 120 aaPredicted RBP8.39□□□□□ -1.07
UPF1-213ENST00000601981 KNG1P01042 644 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 GYPAP02724 150 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 RLN1P04808 185 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 CSN2P05814 226 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 GABRA2P47869 451 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 OR3A3P47888 321 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 EIF2B2P49770 351 aaKnown RBP8.39□□□□□ -1.07
UPF1-213ENST00000601981 LMO4P61968 165 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 IL13RA1P78552 427 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 CBX3Q13185 183 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 CDK10Q15131 360 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 FCN2Q15485 313 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 GRK1Q15835 563 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 CHRFAM7AQ494W8 412 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 LRRC10Q5BKY1 277 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 SPIN3Q5JUX0 258 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 ATPAF1Q5TC12 328 aaPredicted RBP8.39□□□□□ -1.07
UPF1-213ENST00000601981 ZNF626Q68DY1 528 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 STUMQ69YW2 141 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 Q6ZS49 121 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 OVCH2Q7RTZ1 564 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 LHFPL1Q86WI0 220 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 BATF2Q8N1L9 274 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 CIARTQ8N365 385 aaPredicted RBP8.39□□□□□ -1.07
UPF1-213ENST00000601981 HDHD3Q9BSH5 251 aaPredicted RBP8.39□□□□□ -1.07
UPF1-213ENST00000601981 SSBP3Q9BWW4 388 aaPredicted RBP8.39□□□□□ -1.07
UPF1-213ENST00000601981 BEX2Q9BXY8 128 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 WDR13Q9H1Z4 485 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 PPA2Q9H2U2 334 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 RIMS4Q9H426 269 aaPredicted RBP8.39□□□□□ -1.07
UPF1-213ENST00000601981 BEX1Q9HBH7 125 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 ZNF286AQ9HBT8 521 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 HES4Q9HCC6 221 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 ING3Q9NXR8 418 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 IL36RNQ9UBH0 155 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 KAAG1Q9UBP8 84 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 OR14J1Q9UGF5 321 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 ZNF230Q9UIE0 474 aaPredicted RBP8.39□□□□□ -1.07
UPF1-213ENST00000601981 ANXA10Q9UJ72 324 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 ABCA2Q9BZC7 2435 aa8.39□□□□□ -1.07
UPF1-213ENST00000601981 TRBV6-6A0A0A6YYG2 114 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 UBE2QL1A1L167 161 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 POM121CA8CG34 1229 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 MCRIP1C9JLW8 97 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 F5H0A9 414 aaPredicted RBP8.38□□□□□ -1.07
UPF1-213ENST00000601981 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.38□□□□□ -1.07
UPF1-213ENST00000601981 GPR37O15354 613 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 NDUFB3O43676 98 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 SSNA1O43805 119 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 CD5LO43866 347 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 NAPSAO96009 420 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 MSMBP08118 114 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 SULT1A3P0DMM9 295 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 SULT1A4P0DMN0 295 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 IGHV4-31P0DP07 118 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 VSIG10L2P0DP72 767 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 FPR2P25090 351 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 ECI1P42126 302 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 ARPC4P59998 168 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 CD83Q01151 205 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 RBM39Q14498 530 aaKnown RBP8.38□□□□□ -1.07
UPF1-213ENST00000601981 ZNF146Q15072 292 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 PDCD1Q15116 288 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms