RNA–Protein interactions for RNA: ENST00000601849.1

VRK3-224, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-224ENST00000601849 PARP16Q8N5Y8 322 aa7.54□□□□□ -1.2
VRK3-224ENST00000601849 Q8NFD4 153 aa7.54□□□□□ -1.2
VRK3-224ENST00000601849 OR51A4Q8NGJ6 313 aa7.54□□□□□ -1.2
VRK3-224ENST00000601849 ARL11Q969Q4 196 aa7.54□□□□□ -1.2
VRK3-224ENST00000601849 SLC7A6OSQ96CW6 309 aaPredicted RBP7.54□□□□□ -1.2
VRK3-224ENST00000601849 PELI1Q96FA3 418 aa7.54□□□□□ -1.2
VRK3-224ENST00000601849 DUX3Q96PT4 197 aa7.54□□□□□ -1.2
VRK3-224ENST00000601849 DPCDQ9BVM2 203 aaPredicted RBP7.54□□□□□ -1.2
VRK3-224ENST00000601849 METTL9Q9H1A3 318 aa7.54□□□□□ -1.2
VRK3-224ENST00000601849 ING4Q9UNL4 249 aa7.54□□□□□ -1.2
VRK3-224ENST00000601849 ST3GAL6Q9Y274 331 aa7.54□□□□□ -1.2
VRK3-224ENST00000601849 ERGIC3Q9Y282 383 aa7.54□□□□□ -1.2
VRK3-224ENST00000601849 LSM4Q9Y4Z0 139 aaKnown RBP7.54□□□□□ -1.2
VRK3-224ENST00000601849 TMEM30CPA0ZSE6 113 aa7.53□□□□□ -1.2
VRK3-224ENST00000601849 OR4C45A6NMZ5 311 aa7.53□□□□□ -1.2
VRK3-224ENST00000601849 SPINT2O43291 252 aa7.53□□□□□ -1.2
VRK3-224ENST00000601849 ORC5O43913 435 aa7.53□□□□□ -1.2
VRK3-224ENST00000601849 ATP5HO75947 161 aa7.53□□□□□ -1.2
VRK3-224ENST00000601849 CHATP28329 748 aa7.53□□□□□ -1.2
VRK3-224ENST00000601849 REG1BP48304 166 aa7.53□□□□□ -1.2
VRK3-224ENST00000601849 ZP1P60852 638 aa7.53□□□□□ -1.2
VRK3-224ENST00000601849 SNRPGP62308 76 aaKnown RBP7.53□□□□□ -1.2
VRK3-224ENST00000601849 PPP3R1P63098 170 aa7.53□□□□□ -1.2
VRK3-224ENST00000601849 DIAPH2-AS1Q14236 149 aa7.53□□□□□ -1.2
VRK3-224ENST00000601849 GALEQ14376 348 aa7.53□□□□□ -1.2
VRK3-224ENST00000601849 ZNF260Q3ZCT1 412 aa7.53□□□□□ -1.2
VRK3-224ENST00000601849 ATAD3CQ5T2N8 411 aa7.53□□□□□ -1.2
VRK3-224ENST00000601849 RSBN1Q5VWQ0 802 aaPredicted RBP7.53□□□□□ -1.2
VRK3-224ENST00000601849 C18orf65Q6ZTR6 163 aa7.53□□□□□ -1.2
VRK3-224ENST00000601849 LHFPL3Q86UP9 236 aa7.53□□□□□ -1.2
VRK3-224ENST00000601849 IZUMO1Q8IYV9 350 aa7.53□□□□□ -1.2
VRK3-224ENST00000601849 SYS1Q8N2H4 156 aa7.53□□□□□ -1.2
VRK3-224ENST00000601849 LINC00311Q8N616 119 aa7.53□□□□□ -1.2
VRK3-224ENST00000601849 C8orf31Q8N9H6 132 aa7.53□□□□□ -1.2
VRK3-224ENST00000601849 NEK7Q8TDX7 302 aa7.53□□□□□ -1.2
VRK3-224ENST00000601849 S1PR3Q99500 378 aa7.53□□□□□ -1.2
VRK3-224ENST00000601849 ALG8Q9BVK2 526 aa7.53□□□□□ -1.2
VRK3-224ENST00000601849 SPACA1Q9HBV2 294 aa7.53□□□□□ -1.2
VRK3-224ENST00000601849 OAZ3Q9UMX2 235 aa7.53□□□□□ -1.2
VRK3-224ENST00000601849 EXOGQ9Y2C4 368 aaKnown RBP7.53□□□□□ -1.2
VRK3-224ENST00000601849 ZNF256Q9Y2P7 627 aaPredicted RBP7.53□□□□□ -1.2
VRK3-224ENST00000601849 SMAD5-AS1Q9Y6J3 95 aa7.53□□□□□ -1.2
VRK3-224ENST00000601849 IGHV3-72A0A0B4J1Y9 119 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 A0A1W2PPE3 182 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 J3QRE1 110 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 CIB2O75838 187 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 IGHG4P01861 327 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 OR8U8P0C7N1 319 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 SSTR5P35346 364 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 LUMP51884 338 aaPredicted RBP7.52□□□□□ -1.21
VRK3-224ENST00000601849 DOC2BQ14184 412 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 GPR176Q14439 515 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 ZSCAN26Q16670 478 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 MPV17LQ2QL34 196 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 TMEM30BQ3MIR4 351 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 Q3ZCU0 254 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 LPCAT4Q643R3 524 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 ZNF429Q86V71 674 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 RNF152Q8N8N0 203 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 Q8N9W7 124 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 SUMF2Q8NBJ7 301 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 OR11H1Q8NG94 326 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 OR10AC1Q8NH08 325 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 OR52N1Q8NH53 320 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 GPR148Q8TDV2 347 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 C4orf3Q8WVX3 66 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 RTN4IP1Q8WWV3 396 aaPredicted RBP7.52□□□□□ -1.21
VRK3-224ENST00000601849 RNF166Q96A37 237 aaPredicted RBP7.52□□□□□ -1.21
VRK3-224ENST00000601849 PRR25Q96S07 402 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 ASCL2Q99929 193 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 GHITMQ9H3K2 345 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 IFT22Q9H7X7 185 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 ZMAT4Q9H898 229 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 PALMDQ9NP74 551 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 TRAPPC2LQ9UL33 140 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 KIAA2026Q5HYC2 2103 aa7.52□□□□□ -1.21
VRK3-224ENST00000601849 LINC01548A6NM66 108 aa7.51□□□□□ -1.21
VRK3-224ENST00000601849 MCRIP1C9JLW8 97 aa7.51□□□□□ -1.21
VRK3-224ENST00000601849 GABRPO00591 440 aa7.51□□□□□ -1.21
VRK3-224ENST00000601849 IGF1P05019 195 aa7.51□□□□□ -1.21
VRK3-224ENST00000601849 GTF2F2P13984 249 aa7.51□□□□□ -1.21
VRK3-224ENST00000601849 ZNF93P35789 620 aaPredicted RBP7.51□□□□□ -1.21
VRK3-224ENST00000601849 DEFB136Q30KP8 78 aa7.51□□□□□ -1.21
VRK3-224ENST00000601849 PIGYQ3MUY2 71 aa7.51□□□□□ -1.21
VRK3-224ENST00000601849 NHLRC3Q5JS37 347 aa7.51□□□□□ -1.21
VRK3-224ENST00000601849 UTF1Q5T230 341 aa7.51□□□□□ -1.21
VRK3-224ENST00000601849 C6orf183Q5T699 404 aa7.51□□□□□ -1.21
VRK3-224ENST00000601849 STEAP3Q658P3 488 aa7.51□□□□□ -1.21
VRK3-224ENST00000601849 TRAT1Q6PIZ9 186 aa7.51□□□□□ -1.21
VRK3-224ENST00000601849 C10orf67Q8IYJ2 551 aa7.51□□□□□ -1.21
VRK3-224ENST00000601849 OR1N2Q8NGR9 330 aa7.51□□□□□ -1.21
VRK3-224ENST00000601849 PLPPR1Q8TBJ4 325 aa7.51□□□□□ -1.21
VRK3-224ENST00000601849 CCDC107Q8WV48 283 aa7.51□□□□□ -1.21
VRK3-224ENST00000601849 UBE2E2Q96LR5 201 aa7.51□□□□□ -1.21
VRK3-224ENST00000601849 TMEM138Q9NPI0 162 aa7.51□□□□□ -1.21
VRK3-224ENST00000601849 GFOD1Q9NXC2 390 aa7.51□□□□□ -1.21
VRK3-224ENST00000601849 GNG12Q9UBI6 72 aa7.51□□□□□ -1.21
VRK3-224ENST00000601849 CKLFQ9UBR5 152 aa7.51□□□□□ -1.21
VRK3-224ENST00000601849 ZNF107Q9UII5 783 aaPredicted RBP7.51□□□□□ -1.21
VRK3-224ENST00000601849 VSIG4Q9Y279 399 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms