RNA–Protein interactions for RNA: ENST00000600648.1

FARP1-231, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-231ENST00000600648 FAM53AQ6NSI3 398 aaPredicted RBP17.1■□□□□ 0.33
FARP1-231ENST00000600648 GHSRQ92847 366 aa17.1■□□□□ 0.33
FARP1-231ENST00000600648 ZNF184Q99676 751 aaPredicted RBP17.1■□□□□ 0.33
FARP1-231ENST00000600648 IL36GQ9NZH8 169 aa17.1■□□□□ 0.33
FARP1-231ENST00000600648 LINC00527Q9UJ94 153 aa17.1■□□□□ 0.33
FARP1-231ENST00000600648 EXOSC1Q9Y3B2 195 aaKnown RBP17.1■□□□□ 0.33
FARP1-231ENST00000600648 EBAG9O00559 213 aa17.09■□□□□ 0.33
FARP1-231ENST00000600648 SLC35A2P78381 396 aa17.09■□□□□ 0.33
FARP1-231ENST00000600648 MOB3BQ86TA1 216 aa17.09■□□□□ 0.33
FARP1-231ENST00000600648 OR8H3Q8N146 312 aa17.09■□□□□ 0.33
FARP1-231ENST00000600648 C5orf56Q8N8D9 126 aa17.09■□□□□ 0.33
FARP1-231ENST00000600648 OR10A7Q8NGE5 316 aa17.09■□□□□ 0.33
FARP1-231ENST00000600648 ARL11Q969Q4 196 aa17.09■□□□□ 0.33
FARP1-231ENST00000600648 RDH12Q96NR8 316 aa17.09■□□□□ 0.33
FARP1-231ENST00000600648 DIMT1Q9UNQ2 313 aaKnown RBP17.09■□□□□ 0.33
FARP1-231ENST00000600648 IGHV3-43A0A0B4J1X8 118 aa17.08■□□□□ 0.32
FARP1-231ENST00000600648 PNMA8CA0A1B0GUJ8 204 aa17.08■□□□□ 0.32
FARP1-231ENST00000600648 A0A1W2PPK0 400 aa17.08■□□□□ 0.32
FARP1-231ENST00000600648 IRGMA1A4Y4 181 aa17.08■□□□□ 0.32
FARP1-231ENST00000600648 SERPINE3A8MV23 424 aa17.08■□□□□ 0.32
FARP1-231ENST00000600648 CCRL2O00421 344 aa17.08■□□□□ 0.32
FARP1-231ENST00000600648 HSD17B6O14756 317 aa17.08■□□□□ 0.32
FARP1-231ENST00000600648 IGHV3-43DP0DP04 118 aa17.08■□□□□ 0.32
FARP1-231ENST00000600648 NHLRC3Q5JS37 347 aa17.08■□□□□ 0.32
FARP1-231ENST00000600648 IFT22Q9H7X7 185 aa17.08■□□□□ 0.32
FARP1-231ENST00000600648 PAK1IP1Q9NWT1 392 aaPredicted RBP17.08■□□□□ 0.32
FARP1-231ENST00000600648 CHCHD3Q9NX63 227 aaKnown RBP17.08■□□□□ 0.32
FARP1-231ENST00000600648 TRAV8-7A0A075B6U6 113 aa17.07■□□□□ 0.32
FARP1-231ENST00000600648 TRBV5-5A0A0J9YX44 114 aa17.07■□□□□ 0.32
FARP1-231ENST00000600648 SDCBPO00560 298 aaPredicted RBP17.07■□□□□ 0.32
FARP1-231ENST00000600648 IGFBP3P17936 291 aaPredicted RBP17.07■□□□□ 0.32
FARP1-231ENST00000600648 GZMHP20718 246 aa17.07■□□□□ 0.32
FARP1-231ENST00000600648 DMKNQ6E0U4 476 aaPredicted RBP17.07■□□□□ 0.32
FARP1-231ENST00000600648 SLC16A12Q6ZSM3 486 aa17.07■□□□□ 0.32
FARP1-231ENST00000600648 C18orf65Q6ZTR6 163 aa17.07■□□□□ 0.32
FARP1-231ENST00000600648 MUL1Q969V5 352 aa17.07■□□□□ 0.32
FARP1-231ENST00000600648 TMEM80Q96HE8 168 aa17.07■□□□□ 0.32
FARP1-231ENST00000600648 CKLFQ9UBR5 152 aa17.07■□□□□ 0.32
FARP1-231ENST00000600648 IGHV1-3A0A0C4DH29 117 aa17.06■□□□□ 0.32
FARP1-231ENST00000600648 C15orf65H3BRN8 121 aa17.06■□□□□ 0.32
FARP1-231ENST00000600648 GTF2F2P13984 249 aa17.06■□□□□ 0.32
FARP1-231ENST00000600648 MPV17LQ2QL34 196 aa17.06■□□□□ 0.32
FARP1-231ENST00000600648 Q499Y3 187 aa17.06■□□□□ 0.32
FARP1-231ENST00000600648 LINC00596Q86U02 117 aa17.06■□□□□ 0.32
FARP1-231ENST00000600648 JAGN1Q8N5M9 183 aa17.06■□□□□ 0.32
FARP1-231ENST00000600648 RCC1LQ96I51 464 aaKnown RBP17.06■□□□□ 0.32
FARP1-231ENST00000600648 NCBP2LA6PVI3 153 aaKnown RBP17.05■□□□□ 0.32
FARP1-231ENST00000600648 AIPO00170 330 aa17.05■□□□□ 0.32
FARP1-231ENST00000600648 FGF16O43320 207 aa17.05■□□□□ 0.32
FARP1-231ENST00000600648 ZNF780AO75290 641 aaPredicted RBP17.05■□□□□ 0.32
FARP1-231ENST00000600648 MT-ND4P03905 459 aa17.05■□□□□ 0.32
FARP1-231ENST00000600648 GAPDHP04406 335 aaKnown RBP17.05■□□□□ 0.32
FARP1-231ENST00000600648 HOXD3P31249 432 aaPredicted RBP17.05■□□□□ 0.32
FARP1-231ENST00000600648 RPS11P62280 158 aaKnown RBP eCLIP17.05■□□□□ 0.32
FARP1-231ENST00000600648 MED21Q13503 144 aa17.05■□□□□ 0.32
FARP1-231ENST00000600648 ZNF497Q6ZNH5 498 aa17.05■□□□□ 0.32
FARP1-231ENST00000600648 SLC35E3Q7Z769 313 aa17.05■□□□□ 0.32
FARP1-231ENST00000600648 CHPT1Q8WUD6 406 aa17.05■□□□□ 0.32
FARP1-231ENST00000600648 GGHQ92820 318 aa17.05■□□□□ 0.32
FARP1-231ENST00000600648 RBMXL1Q96E39 390 aaKnown RBP17.05■□□□□ 0.32
FARP1-231ENST00000600648 OR14A2Q96R54 314 aa17.05■□□□□ 0.32
FARP1-231ENST00000600648 GFOD1Q9NXC2 390 aa17.05■□□□□ 0.32
FARP1-231ENST00000600648 MRPS28Q9Y2Q9 187 aaKnown RBP17.05■□□□□ 0.32
FARP1-231ENST00000600648 LINC01548A6NM66 108 aa17.04■□□□□ 0.32
FARP1-231ENST00000600648 NUDT19A8MXV4 375 aa17.04■□□□□ 0.32
FARP1-231ENST00000600648 K7EIL1 84 aa17.04■□□□□ 0.32
FARP1-231ENST00000600648 KRTAP10-11P60412 298 aa17.04■□□□□ 0.32
FARP1-231ENST00000600648 RPL23AP62750 156 aaKnown RBP17.04■□□□□ 0.32
FARP1-231ENST00000600648 ZNF816Q0VGE8 651 aaPredicted RBP17.04■□□□□ 0.32
FARP1-231ENST00000600648 YIF1BQ5BJH7 314 aa17.04■□□□□ 0.32
FARP1-231ENST00000600648 TTC23Q5W5X9 447 aa17.04■□□□□ 0.32
FARP1-231ENST00000600648 GLIPR1L1Q6UWM5 242 aa17.04■□□□□ 0.32
FARP1-231ENST00000600648 ETV3LQ6ZN32 361 aa17.04■□□□□ 0.32
FARP1-231ENST00000600648 STX19Q8N4C7 294 aa17.04■□□□□ 0.32
FARP1-231ENST00000600648 LINC00482Q8N8I6 264 aa17.04■□□□□ 0.32
FARP1-231ENST00000600648 EAF1Q96JC9 268 aaPredicted RBP17.04■□□□□ 0.32
FARP1-231ENST00000600648 PGLYRP3Q96LB9 341 aa17.04■□□□□ 0.32
FARP1-231ENST00000600648 SLC31A2O15432 143 aa17.03■□□□□ 0.32
FARP1-231ENST00000600648 ST3GAL4Q11206 333 aa17.03■□□□□ 0.32
FARP1-231ENST00000600648 C8orf86Q6ZUL3 223 aa17.03■□□□□ 0.32
FARP1-231ENST00000600648 OR2W3Q7Z3T1 314 aa17.03■□□□□ 0.32
FARP1-231ENST00000600648 MRPL41Q8IXM3 137 aaKnown RBP17.03■□□□□ 0.32
FARP1-231ENST00000600648 PRR18Q8N4B5 295 aa17.03■□□□□ 0.32
FARP1-231ENST00000600648 DHRSXQ8N5I4 330 aa17.03■□□□□ 0.32
FARP1-231ENST00000600648 ZNF485Q8NCK3 441 aa17.03■□□□□ 0.32
FARP1-231ENST00000600648 SETD9Q8NE22 299 aa17.03■□□□□ 0.32
FARP1-231ENST00000600648 OR10V1Q8NGI7 309 aa17.03■□□□□ 0.32
FARP1-231ENST00000600648 OR52M1Q8NGK5 317 aa17.03■□□□□ 0.32
FARP1-231ENST00000600648 OR4K15Q8NH41 348 aa17.03■□□□□ 0.32
FARP1-231ENST00000600648 CYYR1Q96J86 154 aa17.03■□□□□ 0.32
FARP1-231ENST00000600648 BANF2Q9H503 90 aa17.03■□□□□ 0.32
FARP1-231ENST00000600648 ETAA1Q9NY74 926 aa17.03■□□□□ 0.32
FARP1-231ENST00000600648 TRAPPC2LQ9UL33 140 aa17.03■□□□□ 0.32
FARP1-231ENST00000600648 TRBV5-7A0A0A0MS05 114 aa17.02■□□□□ 0.32
FARP1-231ENST00000600648 WI2-2373I1.2A0A1W2PRP0 233 aa17.02■□□□□ 0.32
FARP1-231ENST00000600648 C12orf77C9JDV5 145 aa17.02■□□□□ 0.32
FARP1-231ENST00000600648 MCRIP1C9JLW8 97 aa17.02■□□□□ 0.32
FARP1-231ENST00000600648 ORC5O43913 435 aa17.02■□□□□ 0.32
FARP1-231ENST00000600648 GPX5O75715 221 aa17.02■□□□□ 0.32
FARP1-231ENST00000600648 IGHG2P01859 326 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms