RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 SMIM30A4D0T7 59 aa10.61□□□□□ -0.71
SRRM1-223ENST00000600523 CLDN34H7C241 214 aa10.61□□□□□ -0.71
SRRM1-223ENST00000600523 CRYBA1P05813 215 aa10.61□□□□□ -0.71
SRRM1-223ENST00000600523 OMGP23515 440 aa10.61□□□□□ -0.71
SRRM1-223ENST00000600523 DLX1P56177 255 aa10.61□□□□□ -0.71
SRRM1-223ENST00000600523 LSM3P62310 102 aaKnown RBP10.61□□□□□ -0.71
SRRM1-223ENST00000600523 IDNKQ5T6J7 187 aa10.61□□□□□ -0.71
SRRM1-223ENST00000600523 MINOS1Q5TGZ0 78 aa10.61□□□□□ -0.71
SRRM1-223ENST00000600523 ZNF626Q68DY1 528 aa10.61□□□□□ -0.71
SRRM1-223ENST00000600523 Q6YL49 198 aa10.61□□□□□ -0.71
SRRM1-223ENST00000600523 SLC16A12Q6ZSM3 486 aa10.61□□□□□ -0.71
SRRM1-223ENST00000600523 C6orf201Q7Z4U5 140 aa10.61□□□□□ -0.71
SRRM1-223ENST00000600523 ABHD12Q8N2K0 398 aa10.61□□□□□ -0.71
SRRM1-223ENST00000600523 FAM89BQ8N5H3 189 aa10.61□□□□□ -0.71
SRRM1-223ENST00000600523 OR5R1Q8NH85 324 aa10.61□□□□□ -0.71
SRRM1-223ENST00000600523 RAB3CQ96E17 227 aa10.61□□□□□ -0.71
SRRM1-223ENST00000600523 NICN1Q9BSH3 213 aa10.61□□□□□ -0.71
SRRM1-223ENST00000600523 FUNDC2Q9BWH2 189 aa10.61□□□□□ -0.71
SRRM1-223ENST00000600523 ATG5Q9H1Y0 275 aa10.61□□□□□ -0.71
SRRM1-223ENST00000600523 ABCB10Q9NRK6 738 aa10.61□□□□□ -0.71
SRRM1-223ENST00000600523 ZNF581Q9P0T4 197 aa10.61□□□□□ -0.71
SRRM1-223ENST00000600523 AMMECR1Q9Y4X0 333 aaPredicted RBP10.61□□□□□ -0.71
SRRM1-223ENST00000600523 ETV7Q9Y603 341 aa10.61□□□□□ -0.71
SRRM1-223ENST00000600523 MINOS1-NBL1R4GNA1 71 aa10.61□□□□□ -0.71
SRRM1-223ENST00000600523 ANK3Q12955 4377 aaKnown RBP10.61□□□□□ -0.71
SRRM1-223ENST00000600523 DNAJC9-AS1A6NH13 148 aa10.6□□□□□ -0.71
SRRM1-223ENST00000600523 POM121CA8CG34 1229 aa10.6□□□□□ -0.71
SRRM1-223ENST00000600523 SDCBPO00560 298 aaPredicted RBP10.6□□□□□ -0.71
SRRM1-223ENST00000600523 HOXA3O43365 443 aaPredicted RBP10.6□□□□□ -0.71
SRRM1-223ENST00000600523 NOL3O60936 208 aaKnown RBP10.6□□□□□ -0.71
SRRM1-223ENST00000600523 VENTXO95231 258 aa10.6□□□□□ -0.71
SRRM1-223ENST00000600523 SMIM18P0DKX4 95 aa10.6□□□□□ -0.71
SRRM1-223ENST00000600523 SLC2A2P11168 524 aaPredicted RBP10.6□□□□□ -0.71
SRRM1-223ENST00000600523 HTR1DP28221 377 aa10.6□□□□□ -0.71
SRRM1-223ENST00000600523 ACTG1P63261 375 aa10.6□□□□□ -0.71
SRRM1-223ENST00000600523 LTC4SQ16873 150 aa10.6□□□□□ -0.71
SRRM1-223ENST00000600523 C17orf58Q2M2W7 97 aa10.6□□□□□ -0.71
SRRM1-223ENST00000600523 SIGIRRQ6IA17 410 aa10.6□□□□□ -0.71
SRRM1-223ENST00000600523 MOB1BQ7L9L4 216 aa10.6□□□□□ -0.71
SRRM1-223ENST00000600523 LDLRAD3Q86YD5 345 aa10.6□□□□□ -0.71
SRRM1-223ENST00000600523 PRR18Q8N4B5 295 aa10.6□□□□□ -0.71
SRRM1-223ENST00000600523 BEND2Q8NDZ0 799 aa10.6□□□□□ -0.71
SRRM1-223ENST00000600523 OR13F1Q8NGS4 319 aa10.6□□□□□ -0.71
SRRM1-223ENST00000600523 OR4K15Q8NH41 348 aa10.6□□□□□ -0.71
SRRM1-223ENST00000600523 OR9G1Q8NH87 305 aa10.6□□□□□ -0.71
SRRM1-223ENST00000600523 RFESDQ8TAC1 157 aa10.6□□□□□ -0.71
SRRM1-223ENST00000600523 SETD6Q8TBK2 473 aa10.6□□□□□ -0.71
SRRM1-223ENST00000600523 FAM216AQ8WUB2 273 aa10.6□□□□□ -0.71
SRRM1-223ENST00000600523 MALSU1Q96EH3 234 aa10.6□□□□□ -0.71
SRRM1-223ENST00000600523 KIRREL1Q96J84 757 aa10.6□□□□□ -0.71
SRRM1-223ENST00000600523 ZNF48Q96MX3 618 aaPredicted RBP10.6□□□□□ -0.71
SRRM1-223ENST00000600523 SULT4A1Q9BR01 284 aa10.6□□□□□ -0.71
SRRM1-223ENST00000600523 FAAP24Q9BTP7 215 aa10.6□□□□□ -0.71
SRRM1-223ENST00000600523 PRDM13Q9H4Q3 707 aa10.6□□□□□ -0.71
SRRM1-223ENST00000600523 LINC00574Q9H8X3 128 aa10.6□□□□□ -0.71
SRRM1-223ENST00000600523 C12orf4Q9NQ89 552 aa10.6□□□□□ -0.71
SRRM1-223ENST00000600523 GNG12Q9UBI6 72 aa10.6□□□□□ -0.71
SRRM1-223ENST00000600523 SCOCQ9UIL1 159 aa10.6□□□□□ -0.71
SRRM1-223ENST00000600523 ZFHX3Q15911 3703 aa10.6□□□□□ -0.71
SRRM1-223ENST00000600523 MDFIC2A0A1B0GVS7 189 aa10.59□□□□□ -0.71
SRRM1-223ENST00000600523 LEUTXA8MZ59 168 aa10.59□□□□□ -0.71
SRRM1-223ENST00000600523 NPIPB11E5RHQ5 1161 aa10.59□□□□□ -0.71
SRRM1-223ENST00000600523 LDLRAD4O15165 306 aa10.59□□□□□ -0.71
SRRM1-223ENST00000600523 SOCS1O15524 211 aa10.59□□□□□ -0.71
SRRM1-223ENST00000600523 RNASE1P07998 156 aaKnown RBP10.59□□□□□ -0.71
SRRM1-223ENST00000600523 MELTFP08582 738 aa10.59□□□□□ -0.71
SRRM1-223ENST00000600523 CD3GP09693 182 aa10.59□□□□□ -0.71
SRRM1-223ENST00000600523 CD34P28906 385 aa10.59□□□□□ -0.71
SRRM1-223ENST00000600523 SSTR5P35346 364 aa10.59□□□□□ -0.71
SRRM1-223ENST00000600523 TALDO1P37837 337 aa10.59□□□□□ -0.71
SRRM1-223ENST00000600523 SERPINB10P48595 397 aa10.59□□□□□ -0.71
SRRM1-223ENST00000600523 UBA52P62987 128 aaKnown RBP10.59□□□□□ -0.71
SRRM1-223ENST00000600523 LRRC75BQ2VPJ9 315 aa10.59□□□□□ -0.71
SRRM1-223ENST00000600523 HCP5Q6MZN7 132 aa10.59□□□□□ -0.71
SRRM1-223ENST00000600523 CCDC144NLQ6NUI1 221 aa10.59□□□□□ -0.71
SRRM1-223ENST00000600523 GAPTQ8N292 157 aa10.59□□□□□ -0.71
SRRM1-223ENST00000600523 OR52M1Q8NGK5 317 aa10.59□□□□□ -0.71
SRRM1-223ENST00000600523 OR10R2Q8NGX6 335 aa10.59□□□□□ -0.71
SRRM1-223ENST00000600523 OR10X1Q8NGY0 326 aa10.59□□□□□ -0.71
SRRM1-223ENST00000600523 ARHGAP5-AS1Q96IT6 56 aa10.59□□□□□ -0.71
SRRM1-223ENST00000600523 CMSS1Q9BQ75 279 aaKnown RBP10.59□□□□□ -0.71
SRRM1-223ENST00000600523 RNF167Q9H6Y7 350 aa10.59□□□□□ -0.71
SRRM1-223ENST00000600523 ZNRD1Q9P1U0 126 aa10.59□□□□□ -0.71
SRRM1-223ENST00000600523 A0A087X0M5 115 aa10.58□□□□□ -0.72
SRRM1-223ENST00000600523 TRAV39A0A0B4J263 110 aa10.58□□□□□ -0.72
SRRM1-223ENST00000600523 A0A1B0GX30 115 aa10.58□□□□□ -0.72
SRRM1-223ENST00000600523 FAM172BPA6NC97 362 aa10.58□□□□□ -0.72
SRRM1-223ENST00000600523 SERPINE3A8MV23 424 aa10.58□□□□□ -0.72
SRRM1-223ENST00000600523 ODF3BA8MYP8 253 aa10.58□□□□□ -0.72
SRRM1-223ENST00000600523 RGS11O94810 467 aa10.58□□□□□ -0.72
SRRM1-223ENST00000600523 LPLP06858 475 aa10.58□□□□□ -0.72
SRRM1-223ENST00000600523 CGB3P0DN86 165 aa10.58□□□□□ -0.72
SRRM1-223ENST00000600523 CGB7P0DN87 165 aa10.58□□□□□ -0.72
SRRM1-223ENST00000600523 IL3RAP26951 378 aa10.58□□□□□ -0.72
SRRM1-223ENST00000600523 IER3P46695 156 aa10.58□□□□□ -0.72
SRRM1-223ENST00000600523 ARFRP1Q13795 201 aa10.58□□□□□ -0.72
SRRM1-223ENST00000600523 SLC9A3R2Q15599 337 aa10.58□□□□□ -0.72
SRRM1-223ENST00000600523 SSX2Q16385 188 aa10.58□□□□□ -0.72
SRRM1-223ENST00000600523 AANATQ16613 207 aa10.58□□□□□ -0.72
SRRM1-223ENST00000600523 TUSC1Q2TAM9 212 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms