RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 OR4A4PQ8NGN8 299 aa12.73□□□□□ -0.37
HIF3A-218ENST00000600383 TAF9BQ9HBM6 251 aa12.73□□□□□ -0.37
HIF3A-218ENST00000600383 SLC2A9Q9NRM0 540 aa12.73□□□□□ -0.37
HIF3A-218ENST00000600383 PPP1R3CQ9UQK1 317 aa12.73□□□□□ -0.37
HIF3A-218ENST00000600383 KCNIP3Q9Y2W7 256 aa12.73□□□□□ -0.37
HIF3A-218ENST00000600383 IGKV1D-17A0A075B6S4 117 aa12.73□□□□□ -0.37
HIF3A-218ENST00000600383 TMEM30CPA0ZSE6 113 aa12.73□□□□□ -0.37
HIF3A-218ENST00000600383 IFNL4K9M1U5 179 aa12.73□□□□□ -0.37
HIF3A-218ENST00000600383 M0R233 179 aa12.73□□□□□ -0.37
HIF3A-218ENST00000600383 HSPA12AO43301 675 aa12.73□□□□□ -0.37
HIF3A-218ENST00000600383 PLAUP00749 431 aa12.73□□□□□ -0.37
HIF3A-218ENST00000600383 CFHR2P36980 270 aa12.73□□□□□ -0.37
HIF3A-218ENST00000600383 LGALSLQ3ZCW2 172 aaPredicted RBP12.73□□□□□ -0.37
HIF3A-218ENST00000600383 DMRTC2Q8IXT2 367 aaPredicted RBP12.73□□□□□ -0.37
HIF3A-218ENST00000600383 DEFB108BQ8NET1 73 aa12.73□□□□□ -0.37
HIF3A-218ENST00000600383 OR1A1Q9P1Q5 309 aa12.73□□□□□ -0.37
HIF3A-218ENST00000600383 RNF7Q9UBF6 113 aa12.73□□□□□ -0.37
HIF3A-218ENST00000600383 PCDHB10Q9UN67 800 aa12.73□□□□□ -0.37
HIF3A-218ENST00000600383 SPTBN1Q01082 2364 aaKnown RBP12.72□□□□□ -0.37
HIF3A-218ENST00000600383 CRYM-AS1A6NIL9 109 aa12.72□□□□□ -0.37
HIF3A-218ENST00000600383 C17orf100A8MU93 164 aa12.72□□□□□ -0.37
HIF3A-218ENST00000600383 LHBP01229 141 aa12.72□□□□□ -0.37
HIF3A-218ENST00000600383 HOXB5P09067 269 aa12.72□□□□□ -0.37
HIF3A-218ENST00000600383 CD80P33681 288 aa12.72□□□□□ -0.37
HIF3A-218ENST00000600383 GATA4P43694 442 aa12.72□□□□□ -0.37
HIF3A-218ENST00000600383 OR3A1P47881 315 aa12.72□□□□□ -0.37
HIF3A-218ENST00000600383 UQCRFS1P47985 274 aa12.72□□□□□ -0.37
HIF3A-218ENST00000600383 GLIPR1P48060 266 aa12.72□□□□□ -0.37
HIF3A-218ENST00000600383 EDDM3AQ14507 147 aa12.72□□□□□ -0.37
HIF3A-218ENST00000600383 KRBOX4Q5JUW0 171 aa12.72□□□□□ -0.37
HIF3A-218ENST00000600383 SHARPINQ9H0F6 387 aa12.72□□□□□ -0.37
HIF3A-218ENST00000600383 KCNIP1Q9NZI2 227 aa12.72□□□□□ -0.37
HIF3A-218ENST00000600383 ANKHD1Q8IWZ3 2542 aaKnown RBP12.72□□□□□ -0.37
HIF3A-218ENST00000600383 FXYD6-FXYD2A0A087WZ82 144 aa12.71□□□□□ -0.37
HIF3A-218ENST00000600383 IGKV1D-13A0A0B4J2D9 117 aa12.71□□□□□ -0.37
HIF3A-218ENST00000600383 DBX1A6NMT0 343 aa12.71□□□□□ -0.37
HIF3A-218ENST00000600383 HSD17B6O14756 317 aa12.71□□□□□ -0.37
HIF3A-218ENST00000600383 IGKV1-13P0DP09 117 aa12.71□□□□□ -0.37
HIF3A-218ENST00000600383 S100A1P23297 94 aa12.71□□□□□ -0.37
HIF3A-218ENST00000600383 GNRHRP30968 328 aa12.71□□□□□ -0.37
HIF3A-218ENST00000600383 UCP3P55916 312 aa12.71□□□□□ -0.37
HIF3A-218ENST00000600383 LPCAT3Q6P1A2 487 aa12.71□□□□□ -0.37
HIF3A-218ENST00000600383 MOB1BQ7L9L4 216 aa12.71□□□□□ -0.37
HIF3A-218ENST00000600383 ZNRF1Q8ND25 227 aa12.71□□□□□ -0.37
HIF3A-218ENST00000600383 PIK3IP1Q96FE7 263 aa12.71□□□□□ -0.37
HIF3A-218ENST00000600383 COQ2Q96H96 371 aa12.71□□□□□ -0.37
HIF3A-218ENST00000600383 GPHA2Q96T91 129 aa12.71□□□□□ -0.37
HIF3A-218ENST00000600383 SLC5A7Q9GZV3 580 aa12.71□□□□□ -0.37
HIF3A-218ENST00000600383 CACNA1BQ00975 2339 aa12.71□□□□□ -0.37
HIF3A-218ENST00000600383 HIVEP3Q5T1R4 2406 aa12.71□□□□□ -0.37
HIF3A-218ENST00000600383 TRBV6-7A0A0A0MS04 114 aa12.71□□□□□ -0.38
HIF3A-218ENST00000600383 MPTX1A8MV57 137 aa12.71□□□□□ -0.38
HIF3A-218ENST00000600383 OR5AC1P0C628 307 aa12.71□□□□□ -0.38
HIF3A-218ENST00000600383 IRF2P14316 349 aa12.71□□□□□ -0.38
HIF3A-218ENST00000600383 GSG1LQ6UXU4 331 aa12.71□□□□□ -0.38
HIF3A-218ENST00000600383 GAPTQ8N292 157 aa12.71□□□□□ -0.38
HIF3A-218ENST00000600383 MRGPRDQ8TDS7 321 aa12.71□□□□□ -0.38
HIF3A-218ENST00000600383 RSRP1Q9BUV0 290 aa12.71□□□□□ -0.38
HIF3A-218ENST00000600383 CCL28Q9NRJ3 127 aa12.71□□□□□ -0.38
HIF3A-218ENST00000600383 DCAF16Q9NXF7 216 aa12.71□□□□□ -0.38
HIF3A-218ENST00000600383 CISD1Q9NZ45 108 aaKnown RBP12.71□□□□□ -0.38
HIF3A-218ENST00000600383 COMMD9Q9P000 198 aa12.71□□□□□ -0.38
HIF3A-218ENST00000600383 ARID1AO14497 2285 aa12.7□□□□□ -0.38
HIF3A-218ENST00000600383 ABCA4P78363 2273 aa12.7□□□□□ -0.38
HIF3A-218ENST00000600383 ARPC5O15511 151 aa12.7□□□□□ -0.38
HIF3A-218ENST00000600383 HLA-GP17693 338 aa12.7□□□□□ -0.38
HIF3A-218ENST00000600383 TNFRSF1AP19438 455 aa12.7□□□□□ -0.38
HIF3A-218ENST00000600383 GNLYP22749 145 aa12.7□□□□□ -0.38
HIF3A-218ENST00000600383 CEACAM6P40199 344 aa12.7□□□□□ -0.38
HIF3A-218ENST00000600383 NDUFA5Q16718 116 aa12.7□□□□□ -0.38
HIF3A-218ENST00000600383 SLC35E4Q6ICL7 350 aa12.7□□□□□ -0.38
HIF3A-218ENST00000600383 ZNF818PQ6ZRF7 136 aa12.7□□□□□ -0.38
HIF3A-218ENST00000600383 PPP1R1CQ8WVI7 109 aa12.7□□□□□ -0.38
HIF3A-218ENST00000600383 NAA60Q9H7X0 242 aa12.7□□□□□ -0.38
HIF3A-218ENST00000600383 DYNLRB1Q9NP97 96 aa12.7□□□□□ -0.38
HIF3A-218ENST00000600383 MBNL3Q9NUK0 354 aaKnown RBP12.7□□□□□ -0.38
HIF3A-218ENST00000600383 OR2W1Q9Y3N9 320 aa12.7□□□□□ -0.38
HIF3A-218ENST00000600383 RBM7Q9Y580 266 aaKnown RBP12.7□□□□□ -0.38
HIF3A-218ENST00000600383 DYSFO75923 2080 aa12.7□□□□□ -0.38
HIF3A-218ENST00000600383 TUSC2O75896 110 aa12.7□□□□□ -0.38
HIF3A-218ENST00000600383 RGS11O94810 467 aa12.7□□□□□ -0.38
HIF3A-218ENST00000600383 APOBEC3AP31941 199 aaPredicted RBP12.7□□□□□ -0.38
HIF3A-218ENST00000600383 FAM90A1Q86YD7 464 aa12.7□□□□□ -0.38
HIF3A-218ENST00000600383 SAP30LQ9HAJ7 183 aa12.7□□□□□ -0.38
HIF3A-218ENST00000600383 RDH8Q9NYR8 311 aa12.7□□□□□ -0.38
HIF3A-218ENST00000600383 RNF115Q9Y4L5 304 aa12.7□□□□□ -0.38
HIF3A-218ENST00000600383 SIAH2O43255 324 aa12.69□□□□□ -0.38
HIF3A-218ENST00000600383 TNFSF12O43508 249 aa12.69□□□□□ -0.38
HIF3A-218ENST00000600383 ZNF737O75373 536 aa12.69□□□□□ -0.38
HIF3A-218ENST00000600383 H1FOOQ8IZA3 346 aaPredicted RBP12.69□□□□□ -0.38
HIF3A-218ENST00000600383 CCDC71LQ8N9Z2 235 aa12.69□□□□□ -0.38
HIF3A-218ENST00000600383 OR1L1Q8NH94 360 aa12.69□□□□□ -0.38
HIF3A-218ENST00000600383 RFESDQ8TAC1 157 aa12.69□□□□□ -0.38
HIF3A-218ENST00000600383 GALMQ96C23 342 aa12.69□□□□□ -0.38
HIF3A-218ENST00000600383 DIRC2Q96SL1 478 aa12.69□□□□□ -0.38
HIF3A-218ENST00000600383 DCTN5Q9BTE1 182 aa12.69□□□□□ -0.38
HIF3A-218ENST00000600383 CABLES2Q9BTV7 478 aa12.69□□□□□ -0.38
HIF3A-218ENST00000600383 RAB18Q9NP72 206 aa12.69□□□□□ -0.38
HIF3A-218ENST00000600383 GSKIPQ9P0R6 139 aa12.69□□□□□ -0.38
HIF3A-218ENST00000600383 A0A0B4J2A0 478 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms