RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	WDR12	Q9GZL7	423 aa	Known RBP	18.11	■□□□□ 0.49
LTBP4-227	ENST00000600026	OR6C3	Q9NZP0	311 aa		18.11	■□□□□ 0.49
LTBP4-227	ENST00000600026	RPUSD1	Q9UJJ7	312 aa	Known RBP	18.11	■□□□□ 0.49
LTBP4-227	ENST00000600026	TRAPPC2L	Q9UL33	140 aa		18.11	■□□□□ 0.49
LTBP4-227	ENST00000600026	KIAA2026	Q5HYC2	2103 aa		18.1	■□□□□ 0.49
LTBP4-227	ENST00000600026	TRBV6-6	A0A0A6YYG2	114 aa		18.1	■□□□□ 0.49
LTBP4-227	ENST00000600026	hADV38S2	A0JD32	116 aa		18.1	■□□□□ 0.49
LTBP4-227	ENST00000600026	ODAM	A1E959	279 aa		18.1	■□□□□ 0.49
LTBP4-227	ENST00000600026	GABARAP	H6UMI1	98 aa		18.1	■□□□□ 0.49
LTBP4-227	ENST00000600026	LPL	P06858	475 aa		18.1	■□□□□ 0.49
LTBP4-227	ENST00000600026	GATA3	P23771	443 aa		18.1	■□□□□ 0.49
LTBP4-227	ENST00000600026	DTYMK	P23919	212 aa		18.1	■□□□□ 0.49
LTBP4-227	ENST00000600026	RPL31	P62899	125 aa	Known RBP	18.1	■□□□□ 0.49
LTBP4-227	ENST00000600026	GUCA2A	Q02747	115 aa		18.1	■□□□□ 0.49
LTBP4-227	ENST00000600026	CR1L	Q2VPA4	569 aa		18.1	■□□□□ 0.49
LTBP4-227	ENST00000600026	FAHD2B	Q6P2I3	314 aa	Predicted RBP	18.1	■□□□□ 0.49
LTBP4-227	ENST00000600026	MOB1B	Q7L9L4	216 aa		18.1	■□□□□ 0.49
LTBP4-227	ENST00000600026	MFSD4A	Q8N468	514 aa		18.1	■□□□□ 0.49
LTBP4-227	ENST00000600026	OR4K15	Q8NH41	348 aa		18.1	■□□□□ 0.49
LTBP4-227	ENST00000600026	GCDH	Q92947	438 aa	Predicted RBP	18.1	■□□□□ 0.49
LTBP4-227	ENST00000600026	FAHD2A	Q96GK7	314 aa		18.1	■□□□□ 0.49
LTBP4-227	ENST00000600026	IFT46	Q9NQC8	304 aa		18.1	■□□□□ 0.49
LTBP4-227	ENST00000600026	MGAT4A	Q9UM21	535 aa		18.1	■□□□□ 0.49
LTBP4-227	ENST00000600026	WNK2	Q9Y3S1	2297 aa		18.1	■□□□□ 0.49
LTBP4-227	ENST00000600026	TLN2	Q9Y4G6	2542 aa		18.09	■□□□□ 0.49
LTBP4-227	ENST00000600026	TRGV10	A0A0A0MS01	117 aa		18.09	■□□□□ 0.49
LTBP4-227	ENST00000600026	KIR2DS1	A0A191URI9	304 aa		18.09	■□□□□ 0.49
LTBP4-227	ENST00000600026	SSX5	O60225	188 aa		18.09	■□□□□ 0.49
LTBP4-227	ENST00000600026	ZNF79	Q15937	498 aa		18.09	■□□□□ 0.49
LTBP4-227	ENST00000600026	RNASE12	Q5GAN4	147 aa	Known RBP	18.09	■□□□□ 0.49
LTBP4-227	ENST00000600026	C6orf183	Q5T699	404 aa		18.09	■□□□□ 0.49
LTBP4-227	ENST00000600026	TRAT1	Q6PIZ9	186 aa		18.09	■□□□□ 0.49
LTBP4-227	ENST00000600026	BTNL3	Q6UXE8	466 aa		18.09	■□□□□ 0.49
LTBP4-227	ENST00000600026	FAM185A	Q8N0U4	392 aa		18.09	■□□□□ 0.49
LTBP4-227	ENST00000600026	GDPD1	Q8N9F7	314 aa		18.09	■□□□□ 0.49
LTBP4-227	ENST00000600026	LY6G5B	Q8NDX9	201 aa		18.09	■□□□□ 0.49
LTBP4-227	ENST00000600026	C8orf46	Q8TAG6	207 aa		18.09	■□□□□ 0.49
LTBP4-227	ENST00000600026	GPX8	Q8TED1	209 aa		18.09	■□□□□ 0.49
LTBP4-227	ENST00000600026	CCDC107	Q8WV48	283 aa		18.09	■□□□□ 0.49
LTBP4-227	ENST00000600026	OCSTAMP	Q9BR26	566 aa		18.09	■□□□□ 0.49
LTBP4-227	ENST00000600026	TMPRSS13	Q9BYE2	586 aa		18.09	■□□□□ 0.49
LTBP4-227	ENST00000600026	C19orf12	Q9NSK7	152 aa		18.09	■□□□□ 0.49
LTBP4-227	ENST00000600026	KCNIP1	Q9NZI2	227 aa		18.09	■□□□□ 0.49
LTBP4-227	ENST00000600026	NAV3	Q8IVL0	2385 aa		18.09	■□□□□ 0.49
LTBP4-227	ENST00000600026		A0A1W2PQ09	198 aa		18.08	■□□□□ 0.48
LTBP4-227	ENST00000600026	MEIOC	A2RUB1	952 aa		18.08	■□□□□ 0.48
LTBP4-227	ENST00000600026	INAFM1	C9JVW0	142 aa		18.08	■□□□□ 0.48
LTBP4-227	ENST00000600026		J3QLI3	93 aa		18.08	■□□□□ 0.48
LTBP4-227	ENST00000600026	GSTZ1	O43708	216 aa	Predicted RBP	18.08	■□□□□ 0.48
LTBP4-227	ENST00000600026	FCGR3A	P08637	254 aa		18.08	■□□□□ 0.48
LTBP4-227	ENST00000600026	GLP1R	P43220	463 aa		18.08	■□□□□ 0.48
LTBP4-227	ENST00000600026		Q8N402	240 aa		18.08	■□□□□ 0.48
LTBP4-227	ENST00000600026	ZNF565	Q8N9K5	539 aa		18.08	■□□□□ 0.48
LTBP4-227	ENST00000600026	OR52I2	Q8NH67	350 aa		18.08	■□□□□ 0.48
LTBP4-227	ENST00000600026	SMIM4	Q8WVI0	70 aa		18.08	■□□□□ 0.48
LTBP4-227	ENST00000600026	SRR	Q9GZT4	340 aa		18.08	■□□□□ 0.48
LTBP4-227	ENST00000600026	TMEM160	Q9NX00	188 aa		18.08	■□□□□ 0.48
LTBP4-227	ENST00000600026	LINC00312	Q9Y6C7	94 aa		18.08	■□□□□ 0.48
LTBP4-227	ENST00000600026		A0A1W2PPH5	198 aa		18.07	■□□□□ 0.48
LTBP4-227	ENST00000600026	MEIS3P1	A6NDR6	274 aa		18.07	■□□□□ 0.48
LTBP4-227	ENST00000600026	RBBP9	O75884	186 aa		18.07	■□□□□ 0.48
LTBP4-227	ENST00000600026	PPIAL4G	P0DN37	164 aa		18.07	■□□□□ 0.48
LTBP4-227	ENST00000600026	GZMH	P20718	246 aa		18.07	■□□□□ 0.48
LTBP4-227	ENST00000600026	DGCR2	P98153	550 aa		18.07	■□□□□ 0.48
LTBP4-227	ENST00000600026	PAX8	Q06710	450 aa		18.07	■□□□□ 0.48
LTBP4-227	ENST00000600026	ZNF880	Q6PDB4	577 aa		18.07	■□□□□ 0.48
LTBP4-227	ENST00000600026	CORO2A	Q92828	525 aa		18.07	■□□□□ 0.48
LTBP4-227	ENST00000600026	ST6GALNAC5	Q9BVH7	336 aa		18.07	■□□□□ 0.48
LTBP4-227	ENST00000600026	ZNF286A	Q9HBT8	521 aa		18.07	■□□□□ 0.48
LTBP4-227	ENST00000600026		Q9N2K0	584 aa		18.07	■□□□□ 0.48
LTBP4-227	ENST00000600026	UBE2J1	Q9Y385	318 aa	Predicted RBP	18.07	■□□□□ 0.48
LTBP4-227	ENST00000600026	CD40LG	P29965	261 aa		18.06	■□□□□ 0.48
LTBP4-227	ENST00000600026	ACTB	P60709	375 aa		18.06	■□□□□ 0.48
LTBP4-227	ENST00000600026	ACTG1	P63261	375 aa		18.06	■□□□□ 0.48
LTBP4-227	ENST00000600026	SSBP1	Q04837	148 aa	Known RBP	18.06	■□□□□ 0.48
LTBP4-227	ENST00000600026	SRSF7	Q16629	238 aa	Known RBP eCLIP	18.06	■□□□□ 0.48
LTBP4-227	ENST00000600026	FAM120AOS	Q5T036	256 aa		18.06	■□□□□ 0.48
LTBP4-227	ENST00000600026	OR13A1	Q8NGR1	328 aa		18.06	■□□□□ 0.48
LTBP4-227	ENST00000600026	MRGPRD	Q8TDS7	321 aa		18.06	■□□□□ 0.48
LTBP4-227	ENST00000600026	C7orf69	Q9H7B7	122 aa		18.06	■□□□□ 0.48
LTBP4-227	ENST00000600026	RAB9B	Q9NP90	201 aa		18.06	■□□□□ 0.48
LTBP4-227	ENST00000600026	MBNL3	Q9NUK0	354 aa	Known RBP	18.06	■□□□□ 0.48
LTBP4-227	ENST00000600026	OPN4	Q9UHM6	478 aa		18.06	■□□□□ 0.48
LTBP4-227	ENST00000600026	ZNF230	Q9UIE0	474 aa	Predicted RBP	18.06	■□□□□ 0.48
LTBP4-227	ENST00000600026	TRAV39	A0A0B4J263	110 aa		18.05	■□□□□ 0.48
LTBP4-227	ENST00000600026	AVP	P01185	164 aa		18.05	■□□□□ 0.48
LTBP4-227	ENST00000600026	LIPF	P07098	398 aa		18.05	■□□□□ 0.48
LTBP4-227	ENST00000600026	RCC1	P18754	421 aa	Predicted RBP	18.05	■□□□□ 0.48
LTBP4-227	ENST00000600026	RCVRN	P35243	200 aa		18.05	■□□□□ 0.48
LTBP4-227	ENST00000600026	KIR2DS4	P43632	304 aa		18.05	■□□□□ 0.48
LTBP4-227	ENST00000600026	PPP5C	P53041	499 aa		18.05	■□□□□ 0.48
LTBP4-227	ENST00000600026	KIR2DS1	Q14954	304 aa		18.05	■□□□□ 0.48
LTBP4-227	ENST00000600026	TMEM200B	Q69YZ2	307 aa		18.05	■□□□□ 0.48
LTBP4-227	ENST00000600026	IL17REL	Q6ZVW7	336 aa		18.05	■□□□□ 0.48
LTBP4-227	ENST00000600026	ZNF554	Q86TJ5	538 aa		18.05	■□□□□ 0.48
LTBP4-227	ENST00000600026	HOGA1	Q86XE5	327 aa		18.05	■□□□□ 0.48
LTBP4-227	ENST00000600026	DMRTB1	Q96MA1	342 aa		18.05	■□□□□ 0.48
LTBP4-227	ENST00000600026	THAP7	Q9BT49	309 aa	Predicted RBP	18.05	■□□□□ 0.48
LTBP4-227	ENST00000600026	GAL3ST2	Q9H3Q3	398 aa		18.05	■□□□□ 0.48
LTBP4-227	ENST00000600026	TAS2R3	Q9NYW6	316 aa		18.05	■□□□□ 0.48

Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms