RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 AIPO00170 330 aa11.41□□□□□ -0.58
LIG1-218ENST00000599322 SPINT2O43291 252 aa11.41□□□□□ -0.58
LIG1-218ENST00000599322 ATP6V1G2O95670 118 aa11.41□□□□□ -0.58
LIG1-218ENST00000599322 LPLP06858 475 aa11.41□□□□□ -0.58
LIG1-218ENST00000599322 FUT3P21217 361 aa11.41□□□□□ -0.58
LIG1-218ENST00000599322 CRHBPP24387 322 aa11.41□□□□□ -0.58
LIG1-218ENST00000599322 IL3RAP26951 378 aa11.41□□□□□ -0.58
LIG1-218ENST00000599322 PSMD7P51665 324 aa11.41□□□□□ -0.58
LIG1-218ENST00000599322 MLLT11Q13015 90 aaPredicted RBP11.41□□□□□ -0.58
LIG1-218ENST00000599322 C17orf58Q2M2W7 97 aa11.41□□□□□ -0.58
LIG1-218ENST00000599322 TREML4Q6UXN2 200 aa11.41□□□□□ -0.58
LIG1-218ENST00000599322 RFESDQ8TAC1 157 aa11.41□□□□□ -0.58
LIG1-218ENST00000599322 PLPPR1Q8TBJ4 325 aa11.41□□□□□ -0.58
LIG1-218ENST00000599322 TOMM40LQ969M1 308 aa11.41□□□□□ -0.58
LIG1-218ENST00000599322 ARL11Q969Q4 196 aa11.41□□□□□ -0.58
LIG1-218ENST00000599322 TMEM203Q969S6 136 aa11.41□□□□□ -0.58
LIG1-218ENST00000599322 NEDD4LQ96PU5 975 aa11.41□□□□□ -0.58
LIG1-218ENST00000599322 CITED1Q99966 193 aa11.41□□□□□ -0.58
LIG1-218ENST00000599322 MMP28Q9H239 520 aa11.41□□□□□ -0.58
LIG1-218ENST00000599322 BANF2Q9H503 90 aa11.41□□□□□ -0.58
LIG1-218ENST00000599322 KCNIP1Q9NZI2 227 aa11.41□□□□□ -0.58
LIG1-218ENST00000599322 A0A1W2PP11 408 aa11.4□□□□□ -0.58
LIG1-218ENST00000599322 MAGEA13PA6NCF6 341 aa11.4□□□□□ -0.58
LIG1-218ENST00000599322 J3QR06 171 aa11.4□□□□□ -0.58
LIG1-218ENST00000599322 PIN1P1O15428 100 aa11.4□□□□□ -0.58
LIG1-218ENST00000599322 ORC5O43913 435 aa11.4□□□□□ -0.58
LIG1-218ENST00000599322 MPIG6BO95866 241 aa11.4□□□□□ -0.58
LIG1-218ENST00000599322 IGLV1-47P01700 117 aa11.4□□□□□ -0.58
LIG1-218ENST00000599322 FAM106CPP0CH98 169 aa11.4□□□□□ -0.58
LIG1-218ENST00000599322 MADCAM1Q13477 382 aa11.4□□□□□ -0.58
LIG1-218ENST00000599322 TPBGQ13641 420 aa11.4□□□□□ -0.58
LIG1-218ENST00000599322 IRF3Q14653 427 aa11.4□□□□□ -0.58
LIG1-218ENST00000599322 HERPUD1Q15011 391 aa11.4□□□□□ -0.58
LIG1-218ENST00000599322 TMEM30BQ3MIR4 351 aa11.4□□□□□ -0.58
LIG1-218ENST00000599322 TPTE2P1Q5T6R2 138 aa11.4□□□□□ -0.58
LIG1-218ENST00000599322 TMEM219Q86XT9 240 aa11.4□□□□□ -0.58
LIG1-218ENST00000599322 DYNAPQ8N1N2 210 aa11.4□□□□□ -0.58
LIG1-218ENST00000599322 SVOPQ8N4V2 548 aa11.4□□□□□ -0.58
LIG1-218ENST00000599322 OR52M1Q8NGK5 317 aa11.4□□□□□ -0.58
LIG1-218ENST00000599322 KCNG3Q8TAE7 436 aa11.4□□□□□ -0.58
LIG1-218ENST00000599322 PIFOQ8TCI5 191 aa11.4□□□□□ -0.58
LIG1-218ENST00000599322 CCDC107Q8WV48 283 aa11.4□□□□□ -0.58
LIG1-218ENST00000599322 MGLLQ99685 303 aa11.4□□□□□ -0.58
LIG1-218ENST00000599322 PLGRKTQ9HBL7 147 aa11.4□□□□□ -0.58
LIG1-218ENST00000599322 ACOT13Q9NPJ3 140 aa11.4□□□□□ -0.58
LIG1-218ENST00000599322 LSM2Q9Y333 95 aaKnown RBP11.4□□□□□ -0.58
LIG1-218ENST00000599322 DSCAML1Q8TD84 2053 aa11.39□□□□□ -0.59
LIG1-218ENST00000599322 NPIPB11E5RHQ5 1161 aa11.39□□□□□ -0.59
LIG1-218ENST00000599322 M0QZK8 103 aa11.39□□□□□ -0.59
LIG1-218ENST00000599322 SDCBPO00560 298 aaPredicted RBP11.39□□□□□ -0.59
LIG1-218ENST00000599322 BPNT1O95861 308 aa11.39□□□□□ -0.59
LIG1-218ENST00000599322 MT-ND4P03905 459 aa11.39□□□□□ -0.59
LIG1-218ENST00000599322 CGB3P0DN86 165 aa11.39□□□□□ -0.59
LIG1-218ENST00000599322 CGB7P0DN87 165 aa11.39□□□□□ -0.59
LIG1-218ENST00000599322 VSIG10L2P0DP72 767 aa11.39□□□□□ -0.59
LIG1-218ENST00000599322 HTR2CP28335 458 aa11.39□□□□□ -0.59
LIG1-218ENST00000599322 GNG10P50151 68 aa11.39□□□□□ -0.59
LIG1-218ENST00000599322 RAB7AP51149 207 aa11.39□□□□□ -0.59
LIG1-218ENST00000599322 C2orf68Q2NKX9 166 aa11.39□□□□□ -0.59
LIG1-218ENST00000599322 ZNF497Q6ZNH5 498 aa11.39□□□□□ -0.59
LIG1-218ENST00000599322 ZNF367Q7RTV3 350 aa11.39□□□□□ -0.59
LIG1-218ENST00000599322 OR6M1Q8NGM8 313 aa11.39□□□□□ -0.59
LIG1-218ENST00000599322 FAM46BQ96A09 425 aa11.39□□□□□ -0.59
LIG1-218ENST00000599322 URM1Q9BTM9 101 aaKnown RBP11.39□□□□□ -0.59
LIG1-218ENST00000599322 LINC00574Q9H8X3 128 aa11.39□□□□□ -0.59
LIG1-218ENST00000599322 LIN7BQ9HAP6 207 aa11.39□□□□□ -0.59
LIG1-218ENST00000599322 GNG12Q9UBI6 72 aa11.39□□□□□ -0.59
LIG1-218ENST00000599322 PSG11Q9UQ72 335 aa11.39□□□□□ -0.59
LIG1-218ENST00000599322 LRRC42Q9Y546 428 aa11.39□□□□□ -0.59
LIG1-218ENST00000599322 TRAV39A0A0B4J263 110 aa11.38□□□□□ -0.59
LIG1-218ENST00000599322 MRPS14O60783 128 aaKnown RBP11.38□□□□□ -0.59
LIG1-218ENST00000599322 PDCD6O75340 191 aa11.38□□□□□ -0.59
LIG1-218ENST00000599322 UCHL1P09936 223 aa11.38□□□□□ -0.59
LIG1-218ENST00000599322 CPEP16870 476 aa11.38□□□□□ -0.59
LIG1-218ENST00000599322 SSTR5P35346 364 aa11.38□□□□□ -0.59
LIG1-218ENST00000599322 GDNFP39905 211 aa11.38□□□□□ -0.59
LIG1-218ENST00000599322 HES1Q14469 280 aa11.38□□□□□ -0.59
LIG1-218ENST00000599322 NKAPLQ5M9Q1 402 aa11.38□□□□□ -0.59
LIG1-218ENST00000599322 SYT6Q5T7P8 510 aaPredicted RBP11.38□□□□□ -0.59
LIG1-218ENST00000599322 BAIAP2L2Q6UXY1 529 aa11.38□□□□□ -0.59
LIG1-218ENST00000599322 TMEM59Q9BXS4 323 aa11.38□□□□□ -0.59
LIG1-218ENST00000599322 RCC2Q9P258 522 aaKnown RBP11.38□□□□□ -0.59
LIG1-218ENST00000599322 KIAA2026Q5HYC2 2103 aa11.38□□□□□ -0.59
LIG1-218ENST00000599322 UBE2QL1A1L167 161 aa11.37□□□□□ -0.59
LIG1-218ENST00000599322 PDCD5O14737 125 aa11.37□□□□□ -0.59
LIG1-218ENST00000599322 CHST1O43916 411 aa11.37□□□□□ -0.59
LIG1-218ENST00000599322 IGHV3-7P01780 117 aa11.37□□□□□ -0.59
LIG1-218ENST00000599322 GAPDHP04406 335 aaKnown RBP11.37□□□□□ -0.59
LIG1-218ENST00000599322 VDAC2P45880 294 aaPredicted RBP11.37□□□□□ -0.59
LIG1-218ENST00000599322 EFNB2P52799 333 aa11.37□□□□□ -0.59
LIG1-218ENST00000599322 SRSF4Q08170 494 aaKnown RBP11.37□□□□□ -0.59
LIG1-218ENST00000599322 INSL4Q14641 139 aa11.37□□□□□ -0.59
LIG1-218ENST00000599322 TBCEQ15813 527 aaPredicted RBP11.37□□□□□ -0.59
LIG1-218ENST00000599322 Q3ZCU0 254 aa11.37□□□□□ -0.59
LIG1-218ENST00000599322 C1orf100Q5SVJ3 147 aa11.37□□□□□ -0.59
LIG1-218ENST00000599322 LDLRAD2Q5SZI1 272 aa11.37□□□□□ -0.59
LIG1-218ENST00000599322 FAM27D1Q5T7N8 215 aa11.37□□□□□ -0.59
LIG1-218ENST00000599322 LRRTM1Q86UE6 522 aa11.37□□□□□ -0.59
LIG1-218ENST00000599322 OR8H3Q8N146 312 aa11.37□□□□□ -0.59
LIG1-218ENST00000599322 PRR18Q8N4B5 295 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms