RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 PPP5CP53041 499 aa9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 ACTBP60709 375 aa9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 ACTG1P63261 375 aa9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 DGCR2P98153 550 aa9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 GUCA2AQ02747 115 aa9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 ESCO2Q56NI9 601 aa9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 TRIQKQ629K1 86 aa9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 SLC35E4Q6ICL7 350 aa9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 DUX4L9Q6RFH8 374 aaPredicted RBP9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 MOB1BQ7L9L4 216 aa9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 Q8N402 240 aa9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 PLPPR1Q8TBJ4 325 aa9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 H1FXQ92522 213 aaKnown RBP9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 CCDC32Q9BV29 185 aa9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 PATZ1Q9HBE1 687 aaKnown RBP9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 DUX4Q9UBX2 424 aa9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 CLN8Q9UBY8 286 aa9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 ELF5Q9UKW6 265 aaPredicted RBP9.98□□□□□ -0.81
SHKBP1-213ENST00000597325 MEIKINA0A087WXM9 373 aa9.97□□□□□ -0.81
SHKBP1-213ENST00000597325 GPR37O15354 613 aa9.97□□□□□ -0.81
SHKBP1-213ENST00000597325 GSTZ1O43708 216 aaPredicted RBP9.97□□□□□ -0.81
SHKBP1-213ENST00000597325 RBBP9O75884 186 aa9.97□□□□□ -0.81
SHKBP1-213ENST00000597325 FCGR3AP08637 254 aa9.97□□□□□ -0.81
SHKBP1-213ENST00000597325 DTYMKP23919 212 aa9.97□□□□□ -0.81
SHKBP1-213ENST00000597325 RCVRNP35243 200 aa9.97□□□□□ -0.81
SHKBP1-213ENST00000597325 P2RX3P56373 397 aa9.97□□□□□ -0.81
SHKBP1-213ENST00000597325 GNB2P62879 340 aa9.97□□□□□ -0.81
SHKBP1-213ENST00000597325 AESQ08117 197 aa9.97□□□□□ -0.81
SHKBP1-213ENST00000597325 RSBN1Q5VWQ0 802 aaPredicted RBP9.97□□□□□ -0.81
SHKBP1-213ENST00000597325 TREML4Q6UXN2 200 aa9.97□□□□□ -0.81
SHKBP1-213ENST00000597325 ZNF497Q6ZNH5 498 aa9.97□□□□□ -0.81
SHKBP1-213ENST00000597325 OR52I2Q8NH67 350 aa9.97□□□□□ -0.81
SHKBP1-213ENST00000597325 GPX8Q8TED1 209 aa9.97□□□□□ -0.81
SHKBP1-213ENST00000597325 COQ2Q96H96 371 aa9.97□□□□□ -0.81
SHKBP1-213ENST00000597325 HDHD3Q9BSH5 251 aaPredicted RBP9.97□□□□□ -0.81
SHKBP1-213ENST00000597325 KIF25Q9UIL4 384 aa9.97□□□□□ -0.81
SHKBP1-213ENST00000597325 TRAPPC2LQ9UL33 140 aa9.97□□□□□ -0.81
SHKBP1-213ENST00000597325 MGAT4AQ9UM21 535 aa9.97□□□□□ -0.81
SHKBP1-213ENST00000597325 ODAMA1E959 279 aa9.96□□□□□ -0.82
SHKBP1-213ENST00000597325 MEIOCA2RUB1 952 aa9.96□□□□□ -0.82
SHKBP1-213ENST00000597325 POM121CA8CG34 1229 aa9.96□□□□□ -0.82
SHKBP1-213ENST00000597325 VWC2LB2RUY7 222 aa9.96□□□□□ -0.82
SHKBP1-213ENST00000597325 F5H0A9 414 aaPredicted RBP9.96□□□□□ -0.82
SHKBP1-213ENST00000597325 J3QRK9 145 aa9.96□□□□□ -0.82
SHKBP1-213ENST00000597325 SSX5O60225 188 aa9.96□□□□□ -0.82
SHKBP1-213ENST00000597325 NAPSAO96009 420 aa9.96□□□□□ -0.82
SHKBP1-213ENST00000597325 IGHV2-5P01817 119 aa9.96□□□□□ -0.82
SHKBP1-213ENST00000597325 WNT2P09544 360 aa9.96□□□□□ -0.82
SHKBP1-213ENST00000597325 GSTT2BP0CG30 244 aa9.96□□□□□ -0.82
SHKBP1-213ENST00000597325 ERP29P30040 261 aaKnown RBP9.96□□□□□ -0.82
SHKBP1-213ENST00000597325 GLP1RP43220 463 aa9.96□□□□□ -0.82
SHKBP1-213ENST00000597325 GLIPR1P48060 266 aa9.96□□□□□ -0.82
SHKBP1-213ENST00000597325 PAX5Q02548 391 aa9.96□□□□□ -0.82
SHKBP1-213ENST00000597325 SSBP1Q04837 148 aaKnown RBP9.96□□□□□ -0.82
SHKBP1-213ENST00000597325 C6orf183Q5T699 404 aa9.96□□□□□ -0.82
SHKBP1-213ENST00000597325 TRAT1Q6PIZ9 186 aa9.96□□□□□ -0.82
SHKBP1-213ENST00000597325 OR4K15Q8NH41 348 aa9.96□□□□□ -0.82
SHKBP1-213ENST00000597325 CLDND2Q8NHS1 167 aa9.96□□□□□ -0.82
SHKBP1-213ENST00000597325 MRPL30Q8TCC3 161 aaKnown RBP9.96□□□□□ -0.82
SHKBP1-213ENST00000597325 BORCS5Q969J3 196 aa9.96□□□□□ -0.82
SHKBP1-213ENST00000597325 MSI2Q96DH6 328 aaKnown RBP9.96□□□□□ -0.82
SHKBP1-213ENST00000597325 THAP7Q9BT49 309 aaPredicted RBP9.96□□□□□ -0.82
SHKBP1-213ENST00000597325 SSBP3Q9BWW4 388 aaPredicted RBP9.96□□□□□ -0.82
SHKBP1-213ENST00000597325 ZNF286AQ9HBT8 521 aa9.96□□□□□ -0.82
SHKBP1-213ENST00000597325 TAS2R8Q9NYW2 309 aa9.96□□□□□ -0.82
SHKBP1-213ENST00000597325 KCNIP1Q9NZI2 227 aa9.96□□□□□ -0.82
SHKBP1-213ENST00000597325 OR6C3Q9NZP0 311 aa9.96□□□□□ -0.82
SHKBP1-213ENST00000597325 BIRC6Q9NR09 4857 aa9.96□□□□□ -0.82
SHKBP1-213ENST00000597325 TRGV10A0A0A0MS01 117 aa9.95□□□□□ -0.82
SHKBP1-213ENST00000597325 TRBV23-1A0A0A0MS06 115 aa9.95□□□□□ -0.82
SHKBP1-213ENST00000597325 TRBV6-6A0A0A6YYG2 114 aa9.95□□□□□ -0.82
SHKBP1-213ENST00000597325 KIR2DS1A0A191URI9 304 aa9.95□□□□□ -0.82
SHKBP1-213ENST00000597325 A0A1W2PQ09 198 aa9.95□□□□□ -0.82
SHKBP1-213ENST00000597325 hADV38S2A0JD32 116 aa9.95□□□□□ -0.82
SHKBP1-213ENST00000597325 FAM157AC9JC47 383 aa9.95□□□□□ -0.82
SHKBP1-213ENST00000597325 MT-ND4P03905 459 aa9.95□□□□□ -0.82
SHKBP1-213ENST00000597325 CSF1P09603 554 aa9.95□□□□□ -0.82
SHKBP1-213ENST00000597325 GDNFP39905 211 aa9.95□□□□□ -0.82
SHKBP1-213ENST00000597325 KIR2DS4P43632 304 aa9.95□□□□□ -0.82
SHKBP1-213ENST00000597325 GZMKP49863 264 aa9.95□□□□□ -0.82
SHKBP1-213ENST00000597325 AP3S2P59780 193 aa9.95□□□□□ -0.82
SHKBP1-213ENST00000597325 RPL31P62899 125 aaKnown RBP9.95□□□□□ -0.82
SHKBP1-213ENST00000597325 MEF2CQ06413 473 aaPredicted RBP9.95□□□□□ -0.82
SHKBP1-213ENST00000597325 KIR2DS1Q14954 304 aa9.95□□□□□ -0.82
SHKBP1-213ENST00000597325 ZNF57Q68EA5 555 aaPredicted RBP9.95□□□□□ -0.82
SHKBP1-213ENST00000597325 C16orf87Q6PH81 154 aa9.95□□□□□ -0.82
SHKBP1-213ENST00000597325 FAM185AQ8N0U4 392 aa9.95□□□□□ -0.82
SHKBP1-213ENST00000597325 TPRX1Q8N7U7 411 aa9.95□□□□□ -0.82
SHKBP1-213ENST00000597325 CCDC107Q8WV48 283 aa9.95□□□□□ -0.82
SHKBP1-213ENST00000597325 CYYR1Q96J86 154 aa9.95□□□□□ -0.82
SHKBP1-213ENST00000597325 OCSTAMPQ9BR26 566 aa9.95□□□□□ -0.82
SHKBP1-213ENST00000597325 ST6GALNAC5Q9BVH7 336 aa9.95□□□□□ -0.82
SHKBP1-213ENST00000597325 ABCB10Q9NRK6 738 aa9.95□□□□□ -0.82
SHKBP1-213ENST00000597325 MTFP1Q9UDX5 166 aa9.95□□□□□ -0.82
SHKBP1-213ENST00000597325 ZNF230Q9UIE0 474 aaPredicted RBP9.95□□□□□ -0.82
SHKBP1-213ENST00000597325 EPPK1P58107 5090 aaKnown RBP9.95□□□□□ -0.82
SHKBP1-213ENST00000597325 A0A0A6YYJ9 748 aa9.94□□□□□ -0.82
SHKBP1-213ENST00000597325 IGHV4-61A0A0C4DH41 118 aa9.94□□□□□ -0.82
SHKBP1-213ENST00000597325 A0A1W2PPH5 198 aa9.94□□□□□ -0.82
SHKBP1-213ENST00000597325 ECDO95905 644 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms