RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 VCX3BQ9H321 246 aa12.14□□□□□ -0.47
LIG1-214ENST00000597146 GAL3ST2Q9H3Q3 398 aa12.14□□□□□ -0.47
LIG1-214ENST00000597146 LINC00312Q9Y6C7 94 aa12.14□□□□□ -0.47
LIG1-214ENST00000597146 PSPNO60542 156 aa12.13□□□□□ -0.47
LIG1-214ENST00000597146 ERP29P30040 261 aaKnown RBP12.13□□□□□ -0.47
LIG1-214ENST00000597146 ZNF93P35789 620 aaPredicted RBP12.13□□□□□ -0.47
LIG1-214ENST00000597146 P2RX3P56373 397 aa12.13□□□□□ -0.47
LIG1-214ENST00000597146 AESQ08117 197 aa12.13□□□□□ -0.47
LIG1-214ENST00000597146 YIF1BQ5BJH7 314 aa12.13□□□□□ -0.47
LIG1-214ENST00000597146 KRBOX4Q5JUW0 171 aa12.13□□□□□ -0.47
LIG1-214ENST00000597146 DDI2Q5TDH0 399 aa12.13□□□□□ -0.47
LIG1-214ENST00000597146 OR52W1Q6IF63 320 aa12.13□□□□□ -0.47
LIG1-214ENST00000597146 PXT1Q8NFP0 134 aa12.13□□□□□ -0.47
LIG1-214ENST00000597146 BARHL1Q9BZE3 327 aa12.13□□□□□ -0.47
LIG1-214ENST00000597146 TMEM133Q9H2Q1 129 aa12.13□□□□□ -0.47
LIG1-214ENST00000597146 PLCXD1Q9NUJ7 323 aa12.13□□□□□ -0.47
LIG1-214ENST00000597146 PAK1IP1Q9NWT1 392 aaPredicted RBP12.13□□□□□ -0.47
LIG1-214ENST00000597146 PSORS1C1Q9UIG5 152 aa12.13□□□□□ -0.47
LIG1-214ENST00000597146 UBE2J1Q9Y385 318 aaPredicted RBP12.13□□□□□ -0.47
LIG1-214ENST00000597146 MOB4Q9Y3A3 225 aa12.13□□□□□ -0.47
LIG1-214ENST00000597146 SIRT4Q9Y6E7 314 aaPredicted RBP12.13□□□□□ -0.47
LIG1-214ENST00000597146 A0A1W2PPK0 400 aa12.12□□□□□ -0.47
LIG1-214ENST00000597146 FAM172BPA6NC97 362 aa12.12□□□□□ -0.47
LIG1-214ENST00000597146 SERPINE3A8MV23 424 aa12.12□□□□□ -0.47
LIG1-214ENST00000597146 H0YJX3 145 aa12.12□□□□□ -0.47
LIG1-214ENST00000597146 M0QZK8 103 aa12.12□□□□□ -0.47
LIG1-214ENST00000597146 HSPB6O14558 160 aa12.12□□□□□ -0.47
LIG1-214ENST00000597146 TOR1AO14656 332 aa12.12□□□□□ -0.47
LIG1-214ENST00000597146 MMP23AO75900 390 aa12.12□□□□□ -0.47
LIG1-214ENST00000597146 RPLP1P05386 114 aaKnown RBP12.12□□□□□ -0.47
LIG1-214ENST00000597146 CELP19835 753 aa12.12□□□□□ -0.47
LIG1-214ENST00000597146 PTGFRP43088 359 aa12.12□□□□□ -0.47
LIG1-214ENST00000597146 OR3A1P47881 315 aa12.12□□□□□ -0.47
LIG1-214ENST00000597146 RIPK1Q13546 671 aa12.12□□□□□ -0.47
LIG1-214ENST00000597146 Q499Y3 187 aa12.12□□□□□ -0.47
LIG1-214ENST00000597146 PAN3Q58A45 887 aaKnown RBP12.12□□□□□ -0.47
LIG1-214ENST00000597146 KIAA2026Q5HYC2 2103 aa12.12□□□□□ -0.47
LIG1-214ENST00000597146 ZNF565Q8N9K5 539 aa12.12□□□□□ -0.47
LIG1-214ENST00000597146 OR4D6Q8NGJ1 314 aa12.12□□□□□ -0.47
LIG1-214ENST00000597146 OR51A2Q8NGJ7 313 aa12.12□□□□□ -0.47
LIG1-214ENST00000597146 OR10K1Q8NGX5 313 aa12.12□□□□□ -0.47
LIG1-214ENST00000597146 DPM3Q9P2X0 92 aa12.12□□□□□ -0.47
LIG1-214ENST00000597146 GABRPO00591 440 aa12.11□□□□□ -0.47
LIG1-214ENST00000597146 CDRT1O95170 752 aa12.11□□□□□ -0.47
LIG1-214ENST00000597146 C21orf33P30042 268 aaPredicted RBP12.11□□□□□ -0.47
LIG1-214ENST00000597146 GLIPR1P48060 266 aa12.11□□□□□ -0.47
LIG1-214ENST00000597146 VEGFCP49767 419 aa12.11□□□□□ -0.47
LIG1-214ENST00000597146 WNT4P56705 351 aa12.11□□□□□ -0.47
LIG1-214ENST00000597146 ZP1P60852 638 aa12.11□□□□□ -0.47
LIG1-214ENST00000597146 DMKNQ6E0U4 476 aaPredicted RBP12.11□□□□□ -0.47
LIG1-214ENST00000597146 RGP1Q92546 391 aaPredicted RBP12.11□□□□□ -0.47
LIG1-214ENST00000597146 OR6C3Q9NZP0 311 aa12.11□□□□□ -0.47
LIG1-214ENST00000597146 TPRKBQ9Y3C4 175 aa12.11□□□□□ -0.47
LIG1-214ENST00000597146 DNAH10Q8IVF4 4471 aa12.11□□□□□ -0.47
LIG1-214ENST00000597146 HECTD4Q9Y4D8 3996 aa12.11□□□□□ -0.47
LIG1-214ENST00000597146 TRIM64CA6NLI5 447 aa12.1□□□□□ -0.47
LIG1-214ENST00000597146 LALBAP00709 142 aa12.1□□□□□ -0.47
LIG1-214ENST00000597146 PRRX1P54821 245 aa12.1□□□□□ -0.47
LIG1-214ENST00000597146 SLC35B1P78383 322 aa12.1□□□□□ -0.47
LIG1-214ENST00000597146 GPR176Q14439 515 aa12.1□□□□□ -0.47
LIG1-214ENST00000597146 ATXN7L3Q14CW9 347 aaPredicted RBP12.1□□□□□ -0.47
LIG1-214ENST00000597146 C6orf141Q5SZD1 244 aa12.1□□□□□ -0.47
LIG1-214ENST00000597146 ELP2Q6IA86 826 aa12.1□□□□□ -0.47
LIG1-214ENST00000597146 Q6P435 159 aa12.1□□□□□ -0.47
LIG1-214ENST00000597146 ABHD12Q8N2K0 398 aa12.1□□□□□ -0.47
LIG1-214ENST00000597146 JAGN1Q8N5M9 183 aa12.1□□□□□ -0.47
LIG1-214ENST00000597146 COMMD1Q8N668 190 aa12.1□□□□□ -0.47
LIG1-214ENST00000597146 OR13C5Q8NGS8 318 aa12.1□□□□□ -0.47
LIG1-214ENST00000597146 NEK7Q8TDX7 302 aa12.1□□□□□ -0.47
LIG1-214ENST00000597146 THRSPQ92748 146 aa12.1□□□□□ -0.47
LIG1-214ENST00000597146 TAS2R3Q9NYW6 316 aa12.1□□□□□ -0.47
LIG1-214ENST00000597146 ST3GAL6Q9Y274 331 aa12.1□□□□□ -0.47
LIG1-214ENST00000597146 MEIKINA0A087WXM9 373 aa12.09□□□□□ -0.47
LIG1-214ENST00000597146 ODAMA1E959 279 aa12.09□□□□□ -0.47
LIG1-214ENST00000597146 SLC33A1O00400 549 aaPredicted RBP12.09□□□□□ -0.47
LIG1-214ENST00000597146 ZNF780AO75290 641 aaPredicted RBP12.09□□□□□ -0.47
LIG1-214ENST00000597146 MAS1P04201 325 aa12.09□□□□□ -0.47
LIG1-214ENST00000597146 SERPINA2P20848 420 aa12.09□□□□□ -0.47
LIG1-214ENST00000597146 CDK2P24941 298 aa12.09□□□□□ -0.47
LIG1-214ENST00000597146 NFYBP25208 207 aa12.09□□□□□ -0.47
LIG1-214ENST00000597146 ARHGDIBP52566 201 aa12.09□□□□□ -0.47
LIG1-214ENST00000597146 KIR2DS1Q14954 304 aa12.09□□□□□ -0.47
LIG1-214ENST00000597146 SLC22A6Q4U2R8 563 aa12.09□□□□□ -0.47
LIG1-214ENST00000597146 ATAD3CQ5T2N8 411 aa12.09□□□□□ -0.47
LIG1-214ENST00000597146 PRAMEF5Q5TYX0 476 aa12.09□□□□□ -0.47
LIG1-214ENST00000597146 RTN4RL2Q86UN3 420 aa12.09□□□□□ -0.47
LIG1-214ENST00000597146 STPG2Q8N412 459 aa12.09□□□□□ -0.47
LIG1-214ENST00000597146 NANOGP1Q8N7R0 232 aa12.09□□□□□ -0.47
LIG1-214ENST00000597146 C5orf56Q8N8D9 126 aa12.09□□□□□ -0.47
LIG1-214ENST00000597146 ORAI1Q96D31 301 aa12.09□□□□□ -0.47
LIG1-214ENST00000597146 ZNF184Q99676 751 aaPredicted RBP12.09□□□□□ -0.47
LIG1-214ENST00000597146 MND1Q9BWT6 205 aa12.09□□□□□ -0.47
LIG1-214ENST00000597146 LINC01548A6NM66 108 aa12.08□□□□□ -0.48
LIG1-214ENST00000597146 OR7C1O76099 320 aaPredicted RBP12.08□□□□□ -0.48
LIG1-214ENST00000597146 CDK1P06493 297 aa12.08□□□□□ -0.48
LIG1-214ENST00000597146 GTF2F2P13984 249 aa12.08□□□□□ -0.48
LIG1-214ENST00000597146 SPNP16150 400 aa12.08□□□□□ -0.48
LIG1-214ENST00000597146 MAPK3P27361 379 aaPredicted RBP12.08□□□□□ -0.48
LIG1-214ENST00000597146 BDH1Q02338 343 aa12.08□□□□□ -0.48
LIG1-214ENST00000597146 FHL3Q13643 280 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms