RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 OR56B4Q8NH76 319 aa12.15□□□□□ -0.46
VRK3-212ENST00000596814 ENKURQ8TC29 256 aa12.15□□□□□ -0.46
VRK3-212ENST00000596814 C10orf105Q8TEF2 133 aa12.15□□□□□ -0.46
VRK3-212ENST00000596814 H1FXQ92522 213 aaKnown RBP12.15□□□□□ -0.46
VRK3-212ENST00000596814 PATZ1Q9HBE1 687 aaKnown RBP12.15□□□□□ -0.46
VRK3-212ENST00000596814 EHFQ9NZC4 300 aa12.15□□□□□ -0.46
VRK3-212ENST00000596814 POLQO75417 2590 aa12.15□□□□□ -0.46
VRK3-212ENST00000596814 DOCK11Q5JSL3 2073 aa12.14□□□□□ -0.47
VRK3-212ENST00000596814 DISC1C4P0D8 188 aa12.14□□□□□ -0.47
VRK3-212ENST00000596814 F5H0A9 414 aaPredicted RBP12.14□□□□□ -0.47
VRK3-212ENST00000596814 WNT2P09544 360 aa12.14□□□□□ -0.47
VRK3-212ENST00000596814 SCTP09683 121 aa12.14□□□□□ -0.47
VRK3-212ENST00000596814 BTCP35070 178 aa12.14□□□□□ -0.47
VRK3-212ENST00000596814 RFX2P48378 723 aa12.14□□□□□ -0.47
VRK3-212ENST00000596814 HMGN3Q15651 99 aa12.14□□□□□ -0.47
VRK3-212ENST00000596814 ZNF782Q6ZMW2 699 aaPredicted RBP12.14□□□□□ -0.47
VRK3-212ENST00000596814 ZNF841Q6ZN19 808 aa12.14□□□□□ -0.47
VRK3-212ENST00000596814 OR4A4PQ8NGN8 299 aa12.14□□□□□ -0.47
VRK3-212ENST00000596814 DCTN5Q9BTE1 182 aa12.14□□□□□ -0.47
VRK3-212ENST00000596814 TAF9BQ9HBM6 251 aa12.14□□□□□ -0.47
VRK3-212ENST00000596814 NECAP2Q9NVZ3 263 aa12.14□□□□□ -0.47
VRK3-212ENST00000596814 CLN8Q9UBY8 286 aa12.14□□□□□ -0.47
VRK3-212ENST00000596814 NBPF19A0A087WUL8 3843 aa12.14□□□□□ -0.47
VRK3-212ENST00000596814 TRGV10A0A0A0MS01 117 aa12.14□□□□□ -0.47
VRK3-212ENST00000596814 MEX3AA1L020 520 aaKnown RBP12.14□□□□□ -0.47
VRK3-212ENST00000596814 GPR37O15354 613 aa12.14□□□□□ -0.47
VRK3-212ENST00000596814 IFNA6P05013 189 aa12.14□□□□□ -0.47
VRK3-212ENST00000596814 NPY4RP50391 375 aa12.14□□□□□ -0.47
VRK3-212ENST00000596814 DSCR9P59020 149 aa12.14□□□□□ -0.47
VRK3-212ENST00000596814 OVCH2Q7RTZ1 564 aa12.14□□□□□ -0.47
VRK3-212ENST00000596814 C5orf24Q7Z6I8 188 aa12.14□□□□□ -0.47
VRK3-212ENST00000596814 NRARPQ7Z6K4 114 aa12.14□□□□□ -0.47
VRK3-212ENST00000596814 ZNF554Q86TJ5 538 aa12.14□□□□□ -0.47
VRK3-212ENST00000596814 LRRC75A-AS1Q8N1F1 130 aa12.14□□□□□ -0.47
VRK3-212ENST00000596814 PRR18Q8N4B5 295 aa12.14□□□□□ -0.47
VRK3-212ENST00000596814 ZNF565Q8N9K5 539 aa12.14□□□□□ -0.47
VRK3-212ENST00000596814 NINJ1Q92982 152 aa12.14□□□□□ -0.47
VRK3-212ENST00000596814 LURAP1Q96LR2 239 aa12.14□□□□□ -0.47
VRK3-212ENST00000596814 LPAR3Q9UBY5 353 aa12.14□□□□□ -0.47
VRK3-212ENST00000596814 APCP25054 2843 aa12.13□□□□□ -0.47
VRK3-212ENST00000596814 FAM240BA0A1B0GVZ2 78 aa12.13□□□□□ -0.47
VRK3-212ENST00000596814 hADV38S2A0JD32 116 aa12.13□□□□□ -0.47
VRK3-212ENST00000596814 C12orf77C9JDV5 145 aa12.13□□□□□ -0.47
VRK3-212ENST00000596814 SDCBPO00560 298 aaPredicted RBP12.13□□□□□ -0.47
VRK3-212ENST00000596814 IGHV2-5P01817 119 aa12.13□□□□□ -0.47
VRK3-212ENST00000596814 ZNF735P0CB33 412 aa12.13□□□□□ -0.47
VRK3-212ENST00000596814 SLC6A1P30531 599 aa12.13□□□□□ -0.47
VRK3-212ENST00000596814 SSTR5P35346 364 aa12.13□□□□□ -0.47
VRK3-212ENST00000596814 SEC61A1P61619 476 aaKnown RBP12.13□□□□□ -0.47
VRK3-212ENST00000596814 RPL31P62899 125 aaKnown RBP12.13□□□□□ -0.47
VRK3-212ENST00000596814 MEF2CQ06413 473 aaPredicted RBP12.13□□□□□ -0.47
VRK3-212ENST00000596814 CR1LQ2VPA4 569 aa12.13□□□□□ -0.47
VRK3-212ENST00000596814 IGSF11Q5DX21 431 aa12.13□□□□□ -0.47
VRK3-212ENST00000596814 WDR25Q64LD2 544 aaPredicted RBP12.13□□□□□ -0.47
VRK3-212ENST00000596814 TCF23Q7RTU1 214 aa12.13□□□□□ -0.47
VRK3-212ENST00000596814 ARRDC1Q8N5I2 433 aa12.13□□□□□ -0.47
VRK3-212ENST00000596814 OR51S1Q8NGJ8 323 aa12.13□□□□□ -0.47
VRK3-212ENST00000596814 MBD6Q96DN6 1003 aa12.13□□□□□ -0.47
VRK3-212ENST00000596814 KIRREL1Q96J84 757 aa12.13□□□□□ -0.47
VRK3-212ENST00000596814 SLC6A7Q99884 636 aa12.13□□□□□ -0.47
VRK3-212ENST00000596814 CABLES2Q9BTV7 478 aa12.13□□□□□ -0.47
VRK3-212ENST00000596814 C19orf12Q9NSK7 152 aa12.13□□□□□ -0.47
VRK3-212ENST00000596814 LINC00312Q9Y6C7 94 aa12.13□□□□□ -0.47
VRK3-212ENST00000596814 NAV2Q8IVL1 2488 aa12.12□□□□□ -0.47
VRK3-212ENST00000596814 TRBV23-1A0A0A0MS06 115 aa12.12□□□□□ -0.47
VRK3-212ENST00000596814 VWC2LB2RUY7 222 aa12.12□□□□□ -0.47
VRK3-212ENST00000596814 CTXN2P0C2S0 81 aa12.12□□□□□ -0.47
VRK3-212ENST00000596814 OR5H8P0DN80 308 aa12.12□□□□□ -0.47
VRK3-212ENST00000596814 GZMHP20718 246 aa12.12□□□□□ -0.47
VRK3-212ENST00000596814 CCR6P51684 374 aa12.12□□□□□ -0.47
VRK3-212ENST00000596814 TSPAN5P62079 268 aa12.12□□□□□ -0.47
VRK3-212ENST00000596814 GNB2P62879 340 aa12.12□□□□□ -0.47
VRK3-212ENST00000596814 HERPUD1Q15011 391 aa12.12□□□□□ -0.47
VRK3-212ENST00000596814 TRIM16LQ309B1 348 aa12.12□□□□□ -0.47
VRK3-212ENST00000596814 SCGB2B2Q4G0G5 96 aa12.12□□□□□ -0.47
VRK3-212ENST00000596814 ESCO2Q56NI9 601 aa12.12□□□□□ -0.47
VRK3-212ENST00000596814 TMEM17Q86X19 198 aa12.12□□□□□ -0.47
VRK3-212ENST00000596814 FAM185AQ8N0U4 392 aa12.12□□□□□ -0.47
VRK3-212ENST00000596814 CLDND2Q8NHS1 167 aa12.12□□□□□ -0.47
VRK3-212ENST00000596814 UBALD1Q8TB05 177 aa12.12□□□□□ -0.47
VRK3-212ENST00000596814 CHPT1Q8WUD6 406 aa12.12□□□□□ -0.47
VRK3-212ENST00000596814 IL1F10Q8WWZ1 152 aa12.12□□□□□ -0.47
VRK3-212ENST00000596814 ARL11Q969Q4 196 aa12.12□□□□□ -0.47
VRK3-212ENST00000596814 PRRT1Q99946 306 aa12.12□□□□□ -0.47
VRK3-212ENST00000596814 SSBP3Q9BWW4 388 aaPredicted RBP12.12□□□□□ -0.47
VRK3-212ENST00000596814 DPAGT1Q9H3H5 408 aa12.12□□□□□ -0.47
VRK3-212ENST00000596814 SLC2A8Q9NY64 477 aa12.12□□□□□ -0.47
VRK3-212ENST00000596814 OPN4Q9UHM6 478 aa12.12□□□□□ -0.47
VRK3-212ENST00000596814 SCP2D1Q9UJQ7 156 aa12.12□□□□□ -0.47
VRK3-212ENST00000596814 UBE2J1Q9Y385 318 aaPredicted RBP12.12□□□□□ -0.47
VRK3-212ENST00000596814 MALRD1Q5VYJ5 2156 aa12.11□□□□□ -0.47
VRK3-212ENST00000596814 IGHV4-30-2A0A087WSY4 118 aa12.11□□□□□ -0.47
VRK3-212ENST00000596814 IGKV1-6A0A0C4DH72 117 aa12.11□□□□□ -0.47
VRK3-212ENST00000596814 C15orf65H3BRN8 121 aa12.11□□□□□ -0.47
VRK3-212ENST00000596814 BET1O15155 118 aa12.11□□□□□ -0.47
VRK3-212ENST00000596814 SPINT2O43291 252 aa12.11□□□□□ -0.47
VRK3-212ENST00000596814 HBZP02008 142 aa12.11□□□□□ -0.47
VRK3-212ENST00000596814 ZNF273Q14593 569 aa12.11□□□□□ -0.47
VRK3-212ENST00000596814 OXA1LQ15070 435 aa12.11□□□□□ -0.47
VRK3-212ENST00000596814 CLEC12BQ2HXU8 276 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms