RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 RTN4RL2Q86UN3 420 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 SAMD12Q8N8I0 201 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 OR4K15Q8NH41 348 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 MRPL30Q8TCC3 161 aaKnown RBP6.84□□□□□ -1.31
VRK3-211ENST00000596445 DYNC2LI1Q8TCX1 351 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 MRGPRDQ8TDS7 321 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 CCDC107Q8WV48 283 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 AP3S1Q92572 193 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 PHF21AQ96BD5 680 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 CYYR1Q96J86 154 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 ABCG5Q9H222 651 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 RIMS4Q9H426 269 aaPredicted RBP6.84□□□□□ -1.31
VRK3-211ENST00000596445 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.84□□□□□ -1.31
VRK3-211ENST00000596445 DIABLOQ9NR28 239 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 MBNL3Q9NUK0 354 aaKnown RBP6.84□□□□□ -1.31
VRK3-211ENST00000596445 CALYQ9NYX4 217 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 RSL24D1Q9UHA3 163 aaKnown RBP6.84□□□□□ -1.31
VRK3-211ENST00000596445 AK3Q9UIJ7 227 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 TRAPPC2LQ9UL33 140 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 KCNK7Q9Y2U2 307 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 SESN1Q9Y6P5 492 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 A0A075B6Q4 140 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 IGHV3OR16-10A0A075B7F0 116 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 TRBV6-6A0A0A6YYG2 114 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 TRAV39A0A0B4J263 110 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 IGHV1-69DA0A0B4J2H0 117 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 SMIM31A0A1B0GVY4 71 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 SERPINE3A8MV23 424 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 NPIPB11E5RHQ5 1161 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 C15orf65H3BRN8 121 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 MFNGO00587 321 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 MMP23AO75900 390 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 IGHV1-69P01742 117 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 APOA1P02647 267 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 GSTP1P09211 210 aaKnown RBP6.83□□□□□ -1.32
VRK3-211ENST00000596445 CD3GP09693 182 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 GNB3P16520 340 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 RCC1P18754 421 aaPredicted RBP6.83□□□□□ -1.32
VRK3-211ENST00000596445 EPHA1P21709 976 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 FPR2P25090 351 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 SSTR5P35346 364 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 UBE2E1P51965 193 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 MRPS15P82914 257 aaKnown RBP6.83□□□□□ -1.32
VRK3-211ENST00000596445 KLRD1Q13241 179 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 CDNFQ49AH0 187 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 PRAMEF5Q5TYX0 476 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 OLFML2AQ68BL7 652 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 HCP5Q6MZN7 132 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 MZT2AQ6P582 158 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 ZNF880Q6PDB4 577 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 ZNF782Q6ZMW2 699 aaPredicted RBP6.83□□□□□ -1.32
VRK3-211ENST00000596445 C9orf139Q6ZV77 190 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 MOB1BQ7L9L4 216 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 ZNF554Q86TJ5 538 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 PDZD9Q8IXQ8 264 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 OR10A7Q8NGE5 316 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 OR13D1Q8NGV5 346 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 ARL11Q969Q4 196 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 S100A16Q96FQ6 103 aaKnown RBP6.83□□□□□ -1.32
VRK3-211ENST00000596445 CMTM3Q96MX0 182 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 CMSS1Q9BQ75 279 aaKnown RBP6.83□□□□□ -1.32
VRK3-211ENST00000596445 TMEM133Q9H2Q1 129 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 ZMAT3Q9HA38 289 aaKnown RBP6.83□□□□□ -1.32
VRK3-211ENST00000596445 CHMP1AQ9HD42 196 aaPredicted RBP6.83□□□□□ -1.32
VRK3-211ENST00000596445 RAB9BQ9NP90 201 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 C12orf4Q9NQ89 552 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 KCNIP1Q9NZI2 227 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 CCDC59Q9P031 241 aaKnown RBP6.83□□□□□ -1.32
VRK3-211ENST00000596445 NDUFA13Q9P0J0 144 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 COMMD3Q9UBI1 195 aa6.83□□□□□ -1.32
VRK3-211ENST00000596445 JMJD1CQ15652 2540 aa6.82□□□□□ -1.32
VRK3-211ENST00000596445 TRAV18A0A075B6X5 111 aa6.82□□□□□ -1.32
VRK3-211ENST00000596445 DPPA5A6NC42 116 aa6.82□□□□□ -1.32
VRK3-211ENST00000596445 C12orf77C9JDV5 145 aa6.82□□□□□ -1.32
VRK3-211ENST00000596445 NPFFO15130 113 aa6.82□□□□□ -1.32
VRK3-211ENST00000596445 SPINT2O43291 252 aa6.82□□□□□ -1.32
VRK3-211ENST00000596445 XRCC3O43542 346 aa6.82□□□□□ -1.32
VRK3-211ENST00000596445 HPGDSO60760 199 aa6.82□□□□□ -1.32
VRK3-211ENST00000596445 HBZP02008 142 aa6.82□□□□□ -1.32
VRK3-211ENST00000596445 EIF4EP06730 217 aaKnown RBP6.82□□□□□ -1.32
VRK3-211ENST00000596445 OMGP23515 440 aa6.82□□□□□ -1.32
VRK3-211ENST00000596445 CD34P28906 385 aa6.82□□□□□ -1.32
VRK3-211ENST00000596445 GDNFP39905 211 aa6.82□□□□□ -1.32
VRK3-211ENST00000596445 PITPNAQ00169 270 aa6.82□□□□□ -1.32
VRK3-211ENST00000596445 PRB3Q04118 309 aaPredicted RBP6.82□□□□□ -1.32
VRK3-211ENST00000596445 PNLIPRP3Q17RR3 467 aa6.82□□□□□ -1.32
VRK3-211ENST00000596445 TUSC1Q2TAM9 212 aa6.82□□□□□ -1.32
VRK3-211ENST00000596445 MIDNQ504T8 468 aa6.82□□□□□ -1.32
VRK3-211ENST00000596445 HACD4Q5VWC8 232 aa6.82□□□□□ -1.32
VRK3-211ENST00000596445 BRD3OSQ6XYD6 125 aa6.82□□□□□ -1.32
VRK3-211ENST00000596445 PNKDQ8N490 385 aa6.82□□□□□ -1.32
VRK3-211ENST00000596445 OR11H6Q8NGC7 330 aa6.82□□□□□ -1.32
VRK3-211ENST00000596445 OR52M1Q8NGK5 317 aa6.82□□□□□ -1.32
VRK3-211ENST00000596445 RFESDQ8TAC1 157 aa6.82□□□□□ -1.32
VRK3-211ENST00000596445 DGCR14Q96DF8 476 aaKnown RBP6.82□□□□□ -1.32
VRK3-211ENST00000596445 KIRREL1Q96J84 757 aa6.82□□□□□ -1.32
VRK3-211ENST00000596445 HDHD3Q9BSH5 251 aaPredicted RBP6.82□□□□□ -1.32
VRK3-211ENST00000596445 CLEC7AQ9BXN2 247 aa6.82□□□□□ -1.32
VRK3-211ENST00000596445 MS4A7Q9GZW8 240 aaPredicted RBP6.82□□□□□ -1.32
VRK3-211ENST00000596445 TAF9BQ9HBM6 251 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms