RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 FAM90A8PA6NJQ4 464 aa12.87□□□□□ -0.35
USHBP1-206ENST00000596436 FAM90A7PA6NKC0 464 aa12.87□□□□□ -0.35
USHBP1-206ENST00000596436 FAM90A22PA8MWA6 464 aa12.87□□□□□ -0.35
USHBP1-206ENST00000596436 FAM90A12PA8MX19 464 aa12.87□□□□□ -0.35
USHBP1-206ENST00000596436 FAM90A5PA8MXJ8 464 aa12.87□□□□□ -0.35
USHBP1-206ENST00000596436 FAM90A23PA8MXZ1 464 aa12.87□□□□□ -0.35
USHBP1-206ENST00000596436 BPNT1O95861 308 aa12.87□□□□□ -0.35
USHBP1-206ENST00000596436 FAM90A15PP0C7V4 464 aa12.87□□□□□ -0.35
USHBP1-206ENST00000596436 FAM90A13PP0C7W8 464 aa12.87□□□□□ -0.35
USHBP1-206ENST00000596436 FAM90A14PP0C7W9 464 aa12.87□□□□□ -0.35
USHBP1-206ENST00000596436 FAM90A24PP0C7X0 464 aa12.87□□□□□ -0.35
USHBP1-206ENST00000596436 CGB3P0DN86 165 aa12.87□□□□□ -0.35
USHBP1-206ENST00000596436 CGB7P0DN87 165 aa12.87□□□□□ -0.35
USHBP1-206ENST00000596436 FGF9P31371 208 aaPredicted RBP12.87□□□□□ -0.35
USHBP1-206ENST00000596436 GLP1RP43220 463 aa12.87□□□□□ -0.35
USHBP1-206ENST00000596436 KCNJ3P48549 501 aa12.87□□□□□ -0.35
USHBP1-206ENST00000596436 RPS27AP62979 156 aaKnown RBP12.87□□□□□ -0.35
USHBP1-206ENST00000596436 RAB11BQ15907 218 aa12.87□□□□□ -0.35
USHBP1-206ENST00000596436 UTF1Q5T230 341 aa12.87□□□□□ -0.35
USHBP1-206ENST00000596436 HIST2H2BDQ6DRA6 164 aa12.87□□□□□ -0.35
USHBP1-206ENST00000596436 RAB12Q6IQ22 244 aa12.87□□□□□ -0.35
USHBP1-206ENST00000596436 RTN4RL2Q86UN3 420 aa12.87□□□□□ -0.35
USHBP1-206ENST00000596436 NICN1Q9BSH3 213 aa12.87□□□□□ -0.35
USHBP1-206ENST00000596436 NCOR1P1Q9H4R4 102 aa12.87□□□□□ -0.35
USHBP1-206ENST00000596436 HEXA-AS1Q9H8Q6 139 aa12.87□□□□□ -0.35
USHBP1-206ENST00000596436 TAS2R3Q9NYW6 316 aa12.87□□□□□ -0.35
USHBP1-206ENST00000596436 SESN1Q9Y6P5 492 aa12.87□□□□□ -0.35
USHBP1-206ENST00000596436 COL7A1Q02388 2944 aa12.87□□□□□ -0.35
USHBP1-206ENST00000596436 A0A0A6YYD4 124 aa12.86□□□□□ -0.35
USHBP1-206ENST00000596436 MEIOCA2RUB1 952 aa12.86□□□□□ -0.35
USHBP1-206ENST00000596436 SMIM30A4D0T7 59 aa12.86□□□□□ -0.35
USHBP1-206ENST00000596436 TRIM64CA6NLI5 447 aa12.86□□□□□ -0.35
USHBP1-206ENST00000596436 ODF3BA8MYP8 253 aa12.86□□□□□ -0.35
USHBP1-206ENST00000596436 CD36P16671 472 aa12.86□□□□□ -0.35
USHBP1-206ENST00000596436 GADD45AP24522 165 aa12.86□□□□□ -0.35
USHBP1-206ENST00000596436 MYL9P24844 172 aa12.86□□□□□ -0.35
USHBP1-206ENST00000596436 PLA2G7Q13093 441 aa12.86□□□□□ -0.35
USHBP1-206ENST00000596436 AANATQ16613 207 aa12.86□□□□□ -0.35
USHBP1-206ENST00000596436 LDLRAD2Q5SZI1 272 aa12.86□□□□□ -0.35
USHBP1-206ENST00000596436 HES5Q5TA89 166 aa12.86□□□□□ -0.35
USHBP1-206ENST00000596436 Q6ZTK2 550 aa12.86□□□□□ -0.35
USHBP1-206ENST00000596436 REC114Q7Z4M0 266 aa12.86□□□□□ -0.35
USHBP1-206ENST00000596436 TM2D1Q9BX74 207 aa12.86□□□□□ -0.35
USHBP1-206ENST00000596436 TMEM59Q9BXS4 323 aa12.86□□□□□ -0.35
USHBP1-206ENST00000596436 BARHL1Q9BZE3 327 aa12.86□□□□□ -0.35
USHBP1-206ENST00000596436 MEGF9Q9H1U4 602 aa12.86□□□□□ -0.35
USHBP1-206ENST00000596436 GAL3ST2Q9H3Q3 398 aa12.86□□□□□ -0.35
USHBP1-206ENST00000596436 RNF167Q9H6Y7 350 aa12.86□□□□□ -0.35
USHBP1-206ENST00000596436 RANBP3Q9H6Z4 567 aaPredicted RBP12.86□□□□□ -0.35
USHBP1-206ENST00000596436 OR6C3Q9NZP0 311 aa12.86□□□□□ -0.35
USHBP1-206ENST00000596436 PEX16Q9Y5Y5 336 aa12.86□□□□□ -0.35
USHBP1-206ENST00000596436 TMEM30CPA0ZSE6 113 aa12.85□□□□□ -0.35
USHBP1-206ENST00000596436 FAM172BPA6NC97 362 aa12.85□□□□□ -0.35
USHBP1-206ENST00000596436 ZNF729A6NN14 1252 aaPredicted RBP12.85□□□□□ -0.35
USHBP1-206ENST00000596436 H3BUX3 64 aa12.85□□□□□ -0.35
USHBP1-206ENST00000596436 PDCD5O14737 125 aa12.85□□□□□ -0.35
USHBP1-206ENST00000596436 PAHP00439 452 aa12.85□□□□□ -0.35
USHBP1-206ENST00000596436 SMIM18P0DKX4 95 aa12.85□□□□□ -0.35
USHBP1-206ENST00000596436 ARSBP15848 533 aa12.85□□□□□ -0.35
USHBP1-206ENST00000596436 RAB3BP20337 219 aa12.85□□□□□ -0.35
USHBP1-206ENST00000596436 CDK2P24941 298 aa12.85□□□□□ -0.35
USHBP1-206ENST00000596436 PAX6P26367 422 aa12.85□□□□□ -0.35
USHBP1-206ENST00000596436 HEPN1Q6WQI6 88 aa12.85□□□□□ -0.35
USHBP1-206ENST00000596436 ZNF497Q6ZNH5 498 aa12.85□□□□□ -0.35
USHBP1-206ENST00000596436 OR2W3Q7Z3T1 314 aa12.85□□□□□ -0.35
USHBP1-206ENST00000596436 LHFPL4Q7Z7J7 247 aa12.85□□□□□ -0.35
USHBP1-206ENST00000596436 OR11H6Q8NGC7 330 aa12.85□□□□□ -0.35
USHBP1-206ENST00000596436 OR51D1Q8NGF3 324 aa12.85□□□□□ -0.35
USHBP1-206ENST00000596436 KCNG3Q8TAE7 436 aa12.85□□□□□ -0.35
USHBP1-206ENST00000596436 MRGPRDQ8TDS7 321 aa12.85□□□□□ -0.35
USHBP1-206ENST00000596436 NEK7Q8TDX7 302 aa12.85□□□□□ -0.35
USHBP1-206ENST00000596436 CHCHD6Q9BRQ6 235 aa12.85□□□□□ -0.35
USHBP1-206ENST00000596436 LPAR5Q9H1C0 372 aa12.85□□□□□ -0.35
USHBP1-206ENST00000596436 TMEM133Q9H2Q1 129 aa12.85□□□□□ -0.35
USHBP1-206ENST00000596436 SPACA1Q9HBV2 294 aa12.85□□□□□ -0.35
USHBP1-206ENST00000596436 CALYQ9NYX4 217 aa12.85□□□□□ -0.35
USHBP1-206ENST00000596436 STEAP1Q9UHE8 339 aa12.85□□□□□ -0.35
USHBP1-206ENST00000596436 SSR3Q9UNL2 185 aa12.85□□□□□ -0.35
USHBP1-206ENST00000596436 SIGLEC9Q9Y336 463 aa12.85□□□□□ -0.35
USHBP1-206ENST00000596436 IGHV2-26A0A0B4J1V2 119 aa12.84□□□□□ -0.35
USHBP1-206ENST00000596436 KBTBD11-OT1A0A1B0GTJ5 212 aa12.84□□□□□ -0.35
USHBP1-206ENST00000596436 UBE2QL1A1L167 161 aa12.84□□□□□ -0.35
USHBP1-206ENST00000596436 IFITM5A6NNB3 132 aa12.84□□□□□ -0.35
USHBP1-206ENST00000596436 MCRIP1C9JLW8 97 aa12.84□□□□□ -0.35
USHBP1-206ENST00000596436 LDLRAD4O15165 306 aa12.84□□□□□ -0.35
USHBP1-206ENST00000596436 PDCD6O75340 191 aa12.84□□□□□ -0.35
USHBP1-206ENST00000596436 MT-ND4P03905 459 aa12.84□□□□□ -0.35
USHBP1-206ENST00000596436 ARG1P05089 322 aa12.84□□□□□ -0.35
USHBP1-206ENST00000596436 FUT3P21217 361 aa12.84□□□□□ -0.35
USHBP1-206ENST00000596436 CHATP28329 748 aa12.84□□□□□ -0.35
USHBP1-206ENST00000596436 SSTR5P35346 364 aa12.84□□□□□ -0.35
USHBP1-206ENST00000596436 ZNF626Q68DY1 528 aa12.84□□□□□ -0.35
USHBP1-206ENST00000596436 OR13D1Q8NGV5 346 aa12.84□□□□□ -0.35
USHBP1-206ENST00000596436 FAM3DQ96BQ1 224 aa12.84□□□□□ -0.35
USHBP1-206ENST00000596436 YIPF6Q96EC8 236 aa12.84□□□□□ -0.35
USHBP1-206ENST00000596436 KIRREL1Q96J84 757 aa12.84□□□□□ -0.35
USHBP1-206ENST00000596436 SSX3Q99909 188 aa12.84□□□□□ -0.35
USHBP1-206ENST00000596436 A0A0B4J203 849 aa12.83□□□□□ -0.36
USHBP1-206ENST00000596436 LOC100506127A0A0U1RQW1 187 aa12.83□□□□□ -0.36
USHBP1-206ENST00000596436 AIPO00170 330 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms