RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 UBBP0CG47 229 aa10.47□□□□□ -0.73
USE1-207ENST00000596136 MGMTP16455 207 aa10.47□□□□□ -0.73
USE1-207ENST00000596136 SRMP19623 302 aa10.47□□□□□ -0.73
USE1-207ENST00000596136 NFYBP25208 207 aa10.47□□□□□ -0.73
USE1-207ENST00000596136 BRS3P32247 399 aa10.47□□□□□ -0.73
USE1-207ENST00000596136 SSTR5P35346 364 aa10.47□□□□□ -0.73
USE1-207ENST00000596136 MLLT11Q13015 90 aaPredicted RBP10.47□□□□□ -0.73
USE1-207ENST00000596136 RBM39Q14498 530 aaKnown RBP10.47□□□□□ -0.73
USE1-207ENST00000596136 TRAM1Q15629 374 aa10.47□□□□□ -0.73
USE1-207ENST00000596136 RBM48Q5RL73 367 aaKnown RBP10.47□□□□□ -0.73
USE1-207ENST00000596136 ATAD3CQ5T2N8 411 aa10.47□□□□□ -0.73
USE1-207ENST00000596136 LIPKQ5VXJ0 399 aa10.47□□□□□ -0.73
USE1-207ENST00000596136 SIGIRRQ6IA17 410 aa10.47□□□□□ -0.73
USE1-207ENST00000596136 TMEM91Q6ZNR0 172 aa10.47□□□□□ -0.73
USE1-207ENST00000596136 C16orf82Q7Z2V1 217 aa10.47□□□□□ -0.73
USE1-207ENST00000596136 CEACAM19Q7Z692 300 aa10.47□□□□□ -0.73
USE1-207ENST00000596136 TMEM219Q86XT9 240 aa10.47□□□□□ -0.73
USE1-207ENST00000596136 OR52M1Q8NGK5 317 aa10.47□□□□□ -0.73
USE1-207ENST00000596136 CFHR4Q92496 578 aa10.47□□□□□ -0.73
USE1-207ENST00000596136 UFD1Q92890 307 aa10.47□□□□□ -0.73
USE1-207ENST00000596136 TMED9Q9BVK6 235 aa10.47□□□□□ -0.73
USE1-207ENST00000596136 SERTAD4Q9NUC0 356 aa10.47□□□□□ -0.73
USE1-207ENST00000596136 RAB26Q9ULW5 256 aa10.47□□□□□ -0.73
USE1-207ENST00000596136 PSG11Q9UQ72 335 aa10.47□□□□□ -0.73
USE1-207ENST00000596136 TRAV39A0A0B4J263 110 aa10.46□□□□□ -0.73
USE1-207ENST00000596136 FAM90A9PA6NNJ1 464 aa10.46□□□□□ -0.73
USE1-207ENST00000596136 MCRIP1C9JLW8 97 aa10.46□□□□□ -0.73
USE1-207ENST00000596136 H3BUI4 141 aa10.46□□□□□ -0.73
USE1-207ENST00000596136 M0QZ24 198 aa10.46□□□□□ -0.73
USE1-207ENST00000596136 CA11O75493 328 aa10.46□□□□□ -0.73
USE1-207ENST00000596136 ATP6V1G2O95670 118 aa10.46□□□□□ -0.73
USE1-207ENST00000596136 CPEP16870 476 aa10.46□□□□□ -0.73
USE1-207ENST00000596136 FUT3P21217 361 aa10.46□□□□□ -0.73
USE1-207ENST00000596136 HSD17B12Q53GQ0 312 aa10.46□□□□□ -0.73
USE1-207ENST00000596136 GLT8D1Q68CQ7 371 aa10.46□□□□□ -0.73
USE1-207ENST00000596136 RAB12Q6IQ22 244 aa10.46□□□□□ -0.73
USE1-207ENST00000596136 CCDC144NLQ6NUI1 221 aa10.46□□□□□ -0.73
USE1-207ENST00000596136 C8orf31Q8N9H6 132 aa10.46□□□□□ -0.73
USE1-207ENST00000596136 RFESDQ8TAC1 157 aa10.46□□□□□ -0.73
USE1-207ENST00000596136 WIPF2Q8TF74 440 aaPredicted RBP10.46□□□□□ -0.73
USE1-207ENST00000596136 SELENOIQ9C0D9 397 aa10.46□□□□□ -0.73
USE1-207ENST00000596136 PRSS22Q9GZN4 317 aa10.46□□□□□ -0.73
USE1-207ENST00000596136 BANF2Q9H503 90 aa10.46□□□□□ -0.73
USE1-207ENST00000596136 LIN7BQ9HAP6 207 aa10.46□□□□□ -0.73
USE1-207ENST00000596136 SLC22A1O15245 554 aa10.45□□□□□ -0.74
USE1-207ENST00000596136 CRTAPO75718 401 aaPredicted RBP10.45□□□□□ -0.74
USE1-207ENST00000596136 PSMA1P25786 263 aaKnown RBP10.45□□□□□ -0.74
USE1-207ENST00000596136 ARHGDIBP52566 201 aa10.45□□□□□ -0.74
USE1-207ENST00000596136 LOXL3P58215 753 aa10.45□□□□□ -0.74
USE1-207ENST00000596136 BLCAPP62952 87 aa10.45□□□□□ -0.74
USE1-207ENST00000596136 QRFPP83859 136 aa10.45□□□□□ -0.74
USE1-207ENST00000596136 HERPUD1Q15011 391 aa10.45□□□□□ -0.74
USE1-207ENST00000596136 TBCEQ15813 527 aaPredicted RBP10.45□□□□□ -0.74
USE1-207ENST00000596136 Q3ZCU0 254 aa10.45□□□□□ -0.74
USE1-207ENST00000596136 THNSL2Q86YJ6 484 aa10.45□□□□□ -0.74
USE1-207ENST00000596136 LINC00311Q8N616 119 aa10.45□□□□□ -0.74
USE1-207ENST00000596136 ARL11Q969Q4 196 aa10.45□□□□□ -0.74
USE1-207ENST00000596136 MGLLQ99685 303 aa10.45□□□□□ -0.74
USE1-207ENST00000596136 WNT10AQ9GZT5 417 aa10.45□□□□□ -0.74
USE1-207ENST00000596136 CST11Q9H112 138 aa10.45□□□□□ -0.74
USE1-207ENST00000596136 AMMECR1Q9Y4X0 333 aaPredicted RBP10.45□□□□□ -0.74
USE1-207ENST00000596136 PEX16Q9Y5Y5 336 aa10.45□□□□□ -0.74
USE1-207ENST00000596136 NOTCH1P46531 2555 aa10.44□□□□□ -0.74
USE1-207ENST00000596136 AIPO00170 330 aa10.44□□□□□ -0.74
USE1-207ENST00000596136 PDCD6O75340 191 aa10.44□□□□□ -0.74
USE1-207ENST00000596136 OR2F2O95006 317 aa10.44□□□□□ -0.74
USE1-207ENST00000596136 VSIG8P0DPA2 414 aa10.44□□□□□ -0.74
USE1-207ENST00000596136 VHLP40337 213 aa10.44□□□□□ -0.74
USE1-207ENST00000596136 MNDAP41218 407 aa10.44□□□□□ -0.74
USE1-207ENST00000596136 MAP2K4P45985 399 aa10.44□□□□□ -0.74
USE1-207ENST00000596136 RPS25P62851 125 aaKnown RBP10.44□□□□□ -0.74
USE1-207ENST00000596136 MADCAM1Q13477 382 aa10.44□□□□□ -0.74
USE1-207ENST00000596136 HABP2Q14520 560 aaPredicted RBP10.44□□□□□ -0.74
USE1-207ENST00000596136 TMEM30BQ3MIR4 351 aa10.44□□□□□ -0.74
USE1-207ENST00000596136 FBLN7Q53RD9 439 aa10.44□□□□□ -0.74
USE1-207ENST00000596136 Q6ZS46 218 aa10.44□□□□□ -0.74
USE1-207ENST00000596136 ZNF554Q86TJ5 538 aa10.44□□□□□ -0.74
USE1-207ENST00000596136 KLHDC1Q8N7A1 406 aa10.44□□□□□ -0.74
USE1-207ENST00000596136 NEK7Q8TDX7 302 aa10.44□□□□□ -0.74
USE1-207ENST00000596136 LEAP2Q969E1 77 aa10.44□□□□□ -0.74
USE1-207ENST00000596136 TMEM203Q969S6 136 aa10.44□□□□□ -0.74
USE1-207ENST00000596136 CNBD2Q96M20 576 aa10.44□□□□□ -0.74
USE1-207ENST00000596136 RBM14Q96PK6 669 aaKnown RBP10.44□□□□□ -0.74
USE1-207ENST00000596136 GFI1Q99684 422 aa10.44□□□□□ -0.74
USE1-207ENST00000596136 TM2D1Q9BX74 207 aa10.44□□□□□ -0.74
USE1-207ENST00000596136 CCDC90BQ9GZT6 254 aa10.44□□□□□ -0.74
USE1-207ENST00000596136 MMP27Q9H306 513 aa10.44□□□□□ -0.74
USE1-207ENST00000596136 MBNL3Q9NUK0 354 aaKnown RBP10.44□□□□□ -0.74
USE1-207ENST00000596136 GFOD1Q9NXC2 390 aa10.44□□□□□ -0.74
USE1-207ENST00000596136 ETAA1Q9NY74 926 aa10.44□□□□□ -0.74
USE1-207ENST00000596136 BLOC1S6Q9UL45 172 aa10.44□□□□□ -0.74
USE1-207ENST00000596136 TET2Q6N021 2002 aaPredicted RBP10.44□□□□□ -0.74
USE1-207ENST00000596136 A0A1W2PPI3 338 aa10.43□□□□□ -0.74
USE1-207ENST00000596136 TMEM14DPA8MWL7 114 aa10.43□□□□□ -0.74
USE1-207ENST00000596136 C12orf77C9JDV5 145 aa10.43□□□□□ -0.74
USE1-207ENST00000596136 MRPS14O60783 128 aaKnown RBP10.43□□□□□ -0.74
USE1-207ENST00000596136 ARL6IP5O75915 188 aa10.43□□□□□ -0.74
USE1-207ENST00000596136 AMY1AP04745 511 aa10.43□□□□□ -0.74
USE1-207ENST00000596136 AMY2AP04746 511 aa10.43□□□□□ -0.74
USE1-207ENST00000596136 HSMCR30P0CW71 290 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms