RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 KIAA0141Q14154 515 aaPredicted RBP7.76□□□□□ -1.17
LIG1-209ENST00000596104 PIGYQ3MUY2 71 aa7.76□□□□□ -1.17
LIG1-209ENST00000596104 PARP16Q8N5Y8 322 aa7.76□□□□□ -1.17
LIG1-209ENST00000596104 C8orf31Q8N9H6 132 aa7.76□□□□□ -1.17
LIG1-209ENST00000596104 OR11H1Q8NG94 326 aa7.76□□□□□ -1.17
LIG1-209ENST00000596104 OR8H1Q8NGG4 311 aa7.76□□□□□ -1.17
LIG1-209ENST00000596104 OR52M1Q8NGK5 317 aa7.76□□□□□ -1.17
LIG1-209ENST00000596104 RTN4IP1Q8WWV3 396 aaPredicted RBP7.76□□□□□ -1.17
LIG1-209ENST00000596104 RBMXL1Q96E39 390 aaKnown RBP7.76□□□□□ -1.17
LIG1-209ENST00000596104 KCTD7Q96MP8 289 aa7.76□□□□□ -1.17
LIG1-209ENST00000596104 DAPL1A0PJW8 107 aa7.75□□□□□ -1.17
LIG1-209ENST00000596104 I3L521 148 aa7.75□□□□□ -1.17
LIG1-209ENST00000596104 J3QLW9 94 aa7.75□□□□□ -1.17
LIG1-209ENST00000596104 GABRPO00591 440 aa7.75□□□□□ -1.17
LIG1-209ENST00000596104 LY86O95711 162 aa7.75□□□□□ -1.17
LIG1-209ENST00000596104 ZNF19P17023 458 aa7.75□□□□□ -1.17
LIG1-209ENST00000596104 GZMHP20718 246 aa7.75□□□□□ -1.17
LIG1-209ENST00000596104 VDAC1P21796 283 aa7.75□□□□□ -1.17
LIG1-209ENST00000596104 PPIFP30405 207 aaKnown RBP7.75□□□□□ -1.17
LIG1-209ENST00000596104 SOX6P35712 828 aa7.75□□□□□ -1.17
LIG1-209ENST00000596104 VHLP40337 213 aa7.75□□□□□ -1.17
LIG1-209ENST00000596104 ZNF137PP52743 207 aa7.75□□□□□ -1.17
LIG1-209ENST00000596104 RUNX1Q01196 453 aa7.75□□□□□ -1.17
LIG1-209ENST00000596104 LPCAT4Q643R3 524 aa7.75□□□□□ -1.17
LIG1-209ENST00000596104 ZNF529Q6P280 563 aa7.75□□□□□ -1.17
LIG1-209ENST00000596104 ASCL4Q6XD76 172 aa7.75□□□□□ -1.17
LIG1-209ENST00000596104 AMIGO2Q86SJ2 522 aa7.75□□□□□ -1.17
LIG1-209ENST00000596104 SERPINA12Q8IW75 414 aa7.75□□□□□ -1.17
LIG1-209ENST00000596104 ACBD7Q8N6N7 88 aa7.75□□□□□ -1.17
LIG1-209ENST00000596104 SUMF2Q8NBJ7 301 aa7.75□□□□□ -1.17
LIG1-209ENST00000596104 OR51A2Q8NGJ7 313 aa7.75□□□□□ -1.17
LIG1-209ENST00000596104 OR5D14Q8NGL3 314 aa7.75□□□□□ -1.17
LIG1-209ENST00000596104 OR10K1Q8NGX5 313 aa7.75□□□□□ -1.17
LIG1-209ENST00000596104 TNFAIP8L1Q8WVP5 186 aa7.75□□□□□ -1.17
LIG1-209ENST00000596104 RNFT2Q96EX2 444 aa7.75□□□□□ -1.17
LIG1-209ENST00000596104 C4orf36Q96KX1 117 aa7.75□□□□□ -1.17
LIG1-209ENST00000596104 RASL11BQ9BPW5 248 aa7.75□□□□□ -1.17
LIG1-209ENST00000596104 DPCDQ9BVM2 203 aaPredicted RBP7.75□□□□□ -1.17
LIG1-209ENST00000596104 KLK15Q9H2R5 256 aa7.75□□□□□ -1.17
LIG1-209ENST00000596104 RIBC2Q9H4K1 309 aa7.75□□□□□ -1.17
LIG1-209ENST00000596104 GNB4Q9HAV0 340 aa7.75□□□□□ -1.17
LIG1-209ENST00000596104 GFOD1Q9NXC2 390 aa7.75□□□□□ -1.17
LIG1-209ENST00000596104 TMEM30CPA0ZSE6 113 aa7.74□□□□□ -1.17
LIG1-209ENST00000596104 SLC31A2O15432 143 aa7.74□□□□□ -1.17
LIG1-209ENST00000596104 OR8U8P0C7N1 319 aa7.74□□□□□ -1.17
LIG1-209ENST00000596104 LYL1P12980 280 aa7.74□□□□□ -1.17
LIG1-209ENST00000596104 FASP25445 335 aa7.74□□□□□ -1.17
LIG1-209ENST00000596104 F2RL1P55085 397 aa7.74□□□□□ -1.17
LIG1-209ENST00000596104 GNB1P62873 340 aa7.74□□□□□ -1.17
LIG1-209ENST00000596104 ZNF616Q08AN1 781 aa7.74□□□□□ -1.17
LIG1-209ENST00000596104 NHLRC3Q5JS37 347 aa7.74□□□□□ -1.17
LIG1-209ENST00000596104 SLC25A30Q5SVS4 291 aa7.74□□□□□ -1.17
LIG1-209ENST00000596104 OVCH2Q7RTZ1 564 aa7.74□□□□□ -1.17
LIG1-209ENST00000596104 ZNF491Q8N8L2 437 aa7.74□□□□□ -1.17
LIG1-209ENST00000596104 ZNF439Q8NDP4 499 aa7.74□□□□□ -1.17
LIG1-209ENST00000596104 OR1N2Q8NGR9 330 aa7.74□□□□□ -1.17
LIG1-209ENST00000596104 UBALD1Q8TB05 177 aa7.74□□□□□ -1.17
LIG1-209ENST00000596104 TRUB1Q8WWH5 349 aaKnown RBP7.74□□□□□ -1.17
LIG1-209ENST00000596104 ARL11Q969Q4 196 aa7.74□□□□□ -1.17
LIG1-209ENST00000596104 UBE2E2Q96LR5 201 aa7.74□□□□□ -1.17
LIG1-209ENST00000596104 IFT22Q9H7X7 185 aa7.74□□□□□ -1.17
LIG1-209ENST00000596104 ISYNA1Q9NPH2 558 aa7.74□□□□□ -1.17
LIG1-209ENST00000596104 FAM118AQ9NWS6 357 aa7.74□□□□□ -1.17
LIG1-209ENST00000596104 BIRC6Q9NR09 4857 aa7.73□□□□□ -1.17
LIG1-209ENST00000596104 DNAH7Q8WXX0 4024 aa7.73□□□□□ -1.17
LIG1-209ENST00000596104 EPPK1P58107 5090 aaKnown RBP7.73□□□□□ -1.17
LIG1-209ENST00000596104 IGHV3-43A0A0B4J1X8 118 aa7.73□□□□□ -1.17
LIG1-209ENST00000596104 FAM90A10PA6NDY2 464 aa7.73□□□□□ -1.17
LIG1-209ENST00000596104 TMEM212A6NML5 194 aa7.73□□□□□ -1.17
LIG1-209ENST00000596104 E9PI62 339 aa7.73□□□□□ -1.17
LIG1-209ENST00000596104 SDCBPO00560 298 aaPredicted RBP7.73□□□□□ -1.17
LIG1-209ENST00000596104 ORC5O43913 435 aa7.73□□□□□ -1.17
LIG1-209ENST00000596104 IGLV1-40P01703 118 aa7.73□□□□□ -1.17
LIG1-209ENST00000596104 FRMD6-AS1P0C7T7 363 aa7.73□□□□□ -1.17
LIG1-209ENST00000596104 OR5H8P0DN80 308 aa7.73□□□□□ -1.17
LIG1-209ENST00000596104 IGHV3-43DP0DP04 118 aa7.73□□□□□ -1.17
LIG1-209ENST00000596104 RAB3AP20336 220 aa7.73□□□□□ -1.17
LIG1-209ENST00000596104 IL3RAP26951 378 aa7.73□□□□□ -1.17
LIG1-209ENST00000596104 RBM11P57052 281 aaKnown RBP7.73□□□□□ -1.17
LIG1-209ENST00000596104 RSU1Q15404 277 aa7.73□□□□□ -1.17
LIG1-209ENST00000596104 Q3ZCU0 254 aa7.73□□□□□ -1.17
LIG1-209ENST00000596104 FAM27D1Q5T7N8 215 aa7.73□□□□□ -1.17
LIG1-209ENST00000596104 SLC25A48Q6ZT89 311 aaKnown RBP7.73□□□□□ -1.17
LIG1-209ENST00000596104 ZNF429Q86V71 674 aa7.73□□□□□ -1.17
LIG1-209ENST00000596104 SYS1Q8N2H4 156 aa7.73□□□□□ -1.17
LIG1-209ENST00000596104 DCUN1D4Q92564 292 aa7.73□□□□□ -1.17
LIG1-209ENST00000596104 CPNE2Q96FN4 548 aaPredicted RBP7.73□□□□□ -1.17
LIG1-209ENST00000596104 OR5B12Q96R08 314 aa7.73□□□□□ -1.17
LIG1-209ENST00000596104 CITED4Q96RK1 184 aa7.73□□□□□ -1.17
LIG1-209ENST00000596104 PDCD1LG2Q9BQ51 273 aa7.73□□□□□ -1.17
LIG1-209ENST00000596104 CHCHD6Q9BRQ6 235 aa7.73□□□□□ -1.17
LIG1-209ENST00000596104 ISG20L2Q9H9L3 353 aaKnown RBP7.73□□□□□ -1.17
LIG1-209ENST00000596104 IL36GQ9NZH8 169 aa7.73□□□□□ -1.17
LIG1-209ENST00000596104 ZNF107Q9UII5 783 aaPredicted RBP7.73□□□□□ -1.17
LIG1-209ENST00000596104 OAZ3Q9UMX2 235 aa7.73□□□□□ -1.17
LIG1-209ENST00000596104 ST3GAL6Q9Y274 331 aa7.73□□□□□ -1.17
LIG1-209ENST00000596104 VSIG4Q9Y279 399 aa7.73□□□□□ -1.17
LIG1-209ENST00000596104 EXOGQ9Y2C4 368 aaKnown RBP7.73□□□□□ -1.17
LIG1-209ENST00000596104 AP4S1Q9Y587 144 aa7.73□□□□□ -1.17
LIG1-209ENST00000596104 G3V318 75 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms